Factsheet for Zm00001d028474_P002

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92534	Sorghum	endoplasmic reticulum, golgi	90.53	94.53
TraesCS4A01G083700.3	Wheat	extracellular	80.62	84.88
TraesCS4B01G220500.1	Wheat	golgi	79.51	83.7
TraesCS4D01G220800.2	Wheat	vacuole	80.29	83.16
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	80.4	83.08
Os03t0255100-01	Rice	extracellular	81.63	76.67
KRH22910	Soybean	nucleus	66.7	71.31
KRH29942	Soybean	extracellular, golgi, vacuole	65.81	70.53
KRH26431	Soybean	golgi, vacuole	64.92	69.4
VIT_06s0004g03020.t01	Wine grape	extracellular	65.26	69.27
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	66.82	68.89
KRG89008	Soybean	nucleus	63.59	68.3
CDY15749	Canola	golgi, vacuole	64.14	68.25
Bra011946.1-P	Field mustard	golgi, vacuole	64.14	68.17
CDY31204	Canola	golgi, vacuole	63.81	67.89
CDY04567	Canola	golgi, vacuole	64.25	67.88
Bra000493.1-P	Field mustard	golgi, vacuole	63.7	67.77
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	64.14	67.61
CDX83288	Canola	golgi, vacuole	63.25	67.22
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	62.58	66.9
Solyc11g069270.1.1	Tomato	extracellular	62.69	66.08
PGSC0003DMT400020941	Potato	extracellular	62.58	65.96
Zm00001d046357_P001	Maize	extracellular	45.55	56.65
Zm00001d044290_P005	Maize	golgi, vacuole	49.89	53.98
Zm00001d048440_P003	Maize	vacuole	49.89	51.55
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	48.11	49.88
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	49.89	48.8
Zm00001d041880_P001	Maize	extracellular, plasma membrane	49.11	48.04
Zm00001d053585_P002	Maize	plastid	43.88	47.53
Zm00001d043393_P001	Maize	extracellular	43.32	47.32
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	40.2	44.02
Zm00001d042656_P001	Maize	golgi, vacuole	33.96	43.45
Zm00001d053225_P005	Maize	golgi, vacuole	38.64	41.02
Zm00001d032022_P003	Maize	golgi, vacuole	38.08	40.24
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	34.3	35.36
Zm00001d022621_P005	Maize	vacuole	34.08	34.23

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100279948
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6JWI7	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618
GO:GO:0005623	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	ProteinID:ONL96138.1	PFAM:PF01301
PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000842886B	EnsemblPlantsGene:Zm00001d028474
EnsemblPlants:Zm00001d028474_P002	EnsemblPlants:Zm00001d028474_T002	SEG:seg	:	:	:

Description

Beta-galactosidase

Coordinates

chr1:+:36140572..36147439

Molecular Weight (calculated)

97205.7 Da

IEP (calculated)

6.039

GRAVY (calculated)

-0.109

Length

898 amino acids

Sequence
(BLAST)

001: MAGTARILPA AAAALLLLLC IAGGARAANV TYDHRALVID GVRRVLVSGS IHYPRSTPDM WPGLIQKAKD GGLDVIETYV FWDIHEPVRG QARTNTYIHH
101: QFITHLAALS FFSAVIPSLL RSPTWQYDFE GRKDLAAFVK TVADAGLYVH LRIGPYVCAE WNYGGFPLWL HFIPGIKFRT DNEPFKAEMQ RFTAKVVDTM
201: KGAGLYASQG GPIILSQIEN EYGNIDSAYG APGKAYMRWA AGMAVSLDTG VPWVMCQQAD APDPLINTCN GFYCDQFTPN SAAKPKMWTE NWSGWFLSFG
301: GAVPYRPVED LAFAVARFYQ RGGTFQNYYM YHGGTNLDRS SGGPFIATSY DYDAPIDEYV DLFVTYDDDS GLVRQPKWGH LRDVHKAIKL CEPALIATDP
401: SYTSLGPNVE AAVYKVGSVC AAFLANIDGQ SDKTVTFNGK MYRLPAWSVS ILPDCKNVVL NTAQINSQTT GSEMRYLESS NVASDGSFVT PELAVSDWSY
501: AIEPVGITKD NALTKAGLME QINTTADASD FLWYSTSITV KGDEPYLNGS QSNLAVNSLG HVLQVYINGK IAGSAQGSAS SSLISWQKPI ELVPGKNKID
601: LLSATVGLSN YGAFFDLVGA GITGPVKLSG LNGALDLSSA EWTYQIGLRG EDLHLYDPSE ASPEWVSANA YPINHPLIWY KTKFTPPAGD DPVAIDFTGM
701: GKGEAWVNGQ SIGRYWPTNL APQSGCVNSC NYRGAYSSSK CLKKCGQPSQ TLYHVPRSFL QPGSNDLVLF EHFGGDPSKI SFVMRQTGSV CAQVSEAHPA
801: QIDSWSSQQP MQRYGPALRL ECPKEGQVIS SVKFASFGTP SGTCGSYSHG ECSSTQALSI VQEACIGVSS CSVPVSSNYF GNPCTGVTKS LAVEAACS

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.