Factsheet for Zm00001d032022_P003

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053225_P005	Maize	golgi, vacuole	91.29	91.73
KXG25431	Sorghum	golgi	90.59	90.8
HORVU7Hr1G057460.1	Barley	golgi	72.24	73.8
Os08t0549200-01	Rice	plasma membrane	72.12	72.29
TraesCS7D01G272600.1	Wheat	golgi, vacuole	71.41	72.26
TraesCS7A01G272400.2	Wheat	vacuole	70.94	70.69
TraesCS7B01G169700.1	Wheat	vacuole	71.76	70.03
GSMUA_AchrUn_...	Banana	extracellular, vacuole	56.94	59.31
GSMUA_Achr1P14790_001	Banana	vacuole	56.47	58.18
GSMUA_Achr1P26480_001	Banana	vacuole	55.18	57.69
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	56.35	54.99
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	53.88	54.59
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	52.47	53.54
Solyc01g111540.2.1	Tomato	unclear	51.29	52.47
KRH24309	Soybean	golgi, vacuole	51.65	52.08
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	49.41	51.92
KRH60700	Soybean	extracellular, golgi, vacuole	51.53	51.9
Zm00001d022621_P005	Maize	vacuole	54.47	51.79
KRH29286	Soybean	extracellular, golgi, vacuole	51.06	51.54
Solyc10g055470.1.1	Tomato	vacuole	50.12	51.39
PGSC0003DMT400031178	Potato	vacuole	49.65	50.9
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	46.0	50.13
Bra001991.1-P	Field mustard	golgi, vacuole	47.41	49.63
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	49.41	49.53
Bra013052.1-P	Field mustard	golgi, vacuole	49.29	49.53
CDX75479	Canola	vacuole	49.18	49.47
Bra011577.1-P	Field mustard	vacuole	49.06	49.35
CDX69103	Canola	vacuole	48.82	49.17
CDY40650	Canola	vacuole	48.71	49.05
Bra017687.1-P	Field mustard	vacuole	48.71	49.05
AT4G35010.1	Thale cress	vacuole	48.47	48.76
CDX72512	Canola	vacuole	48.35	48.7
CDX72747	Canola	vacuole	49.41	47.4
CDY70118	Canola	cytosol	32.82	46.97
CDY22419	Canola	cytosol	49.65	44.14
Bra033571.1-P	Field mustard	cytosol	49.65	44.14
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	41.41	42.93
CDY02241	Canola	golgi, vacuole	49.29	42.37
Zm00001d042656_P001	Maize	golgi, vacuole	34.94	42.31
Zm00001d046357_P001	Maize	extracellular	34.82	41.0
Zm00001d043393_P001	Maize	extracellular	38.35	39.66
Zm00001d044290_P005	Maize	golgi, vacuole	38.59	39.52
AT4G38590.2	Thale cress	golgi, vacuole	48.71	39.35
Zm00001d048440_P003	Maize	vacuole	39.76	38.9
CDX89744	Canola	vacuole	49.18	38.49
Zm00001d028474_P002	Maize	vacuole	40.24	38.08
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	38.71	37.99
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	40.24	37.25
Zm00001d053585_P002	Maize	plastid	35.06	35.95
Zm00001d041880_P001	Maize	extracellular, plasma membrane	38.12	35.29

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100194296
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:B8A2F0	EMBL:BT055742
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	ProteinID:ONM04239.1	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742
ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF52	SUPFAM:SSF49785	SUPFAM:SSF51445
SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00019176A6	EnsemblPlantsGene:Zm00001d032022	EnsemblPlants:Zm00001d032022_P003	EnsemblPlants:Zm00001d032022_T003
SEG:seg	:	:	:	:	:

Description

Beta-galactosidase

Coordinates

chr1:-:209620860..209625239

Molecular Weight (calculated)

95469.5 Da

IEP (calculated)

8.923

GRAVY (calculated)

-0.359

Length

850 amino acids

Sequence
(BLAST)

001: MHVDMSHRVR LAAAALVAVA ALALALAPGA AAKWQRTRNG TVVSYDRRSL MFDGHREIFL SGSIHYPRSP PDMWPELIAK AKEGGLNTIE TYVFWNIHEP
101: EKGEFNFEGQ NDVVRFFQLI QEHDMYAMVR LGPFIQAEWN HGGLPYWLRE IPDIVFRTNN EPYKMHMETF VKIIIKRLKD ANLFASQGGP IILAQIENEY
201: QHMEAAFKDE GTKYINWAAK MAISTNIGIP WIMCKQTKAP SDVIPTCNGR NCGDTWPGPT NKSMPLLWTE NWTAQYRVFG DPPSQRSAED IAFAVARFFS
301: VGGTLANYYM YHGGTNFGRT SAAFVMPKYY DEAPLDEFGL YKEPKWGHLR DLHQALKLCK KALLWGTPST EKLGKQLEAR VFEMPEQKVC VAFLSNHNTK
401: DDATMTFRGR PYFVPRHSIS VLADCETVVF GTQHVNAQHN QRTFHFADQT AQNNVWEMFD GENVPKYKQA KIRLRKAGDL YNLTKDKTDY VWYTSSFKLE
501: ADDMPIRSDI KTVLEVNSHG HASVAFVNNK FVGCGHGTKM NKAFTLEKPM DLKKGVNHVA VLASSMGMTD SGAYMEHRLA GVDRVQITGL NAGTLDLTNN
601: GWGHIVGLVG ERKQIYTDKG MGSVTWKPAM NDRPLTWYKR HFDMPSGEDP VVLDMSTMGK GMMFVNGQGI GRYWISYKHA LGRPSQQLYH VPRSFLRQKD
701: NMLVLFEEEF GRPDAIMILT VKRDNICTFI SERNPAHIMS WERKDSQITA KANADDLRAR AALACPPKKL IQQVVFASYG NPAGICGNYT VGSCHTPRAK
801: EVVEKACLGK RVCTLPVAAD VYGGDANCSG TTATLAVQAK CSKRSPSAAQ

Best Arabidopsis Sequence Match ( AT4G38590.1 )
(BLAST)

001: MWPSIIDKAR IGGLNTIQTY VFWNVHEPEQ GKYDFKGRFD LVKFIKLIHE KGLYVTLRLG PFIQAEWNHG GLPYWLREVP DVYFRTNNEP FKEHTERYVR
101: KILGMMKEEK LFASQGGPII LGQIENEYNA VQLAYKENGE KYIKWAANLV ESMNLGIPWV MCKQNDAPGN LINACNGRHC GDTFPGPNRH DKPSLWTENW
201: TTQFRVFGDP PTQRTVEDIA FSVARYFSKN GSHVNYYMYH GGTNFGRTSA HFVTTRYYDD APLDEFGLEK APKYGHLKHV HRALRLCKKA LFWGQLRAQT
301: LGPDTEVRYY EQPGTKVCAA FLSNNNTRDT NTIKFKGQDY VLPSRSISIL PDCKTVVYNT AQIVAQHSWR DFVKSEKTSK GLKFEMFSEN IPSLLDGDSL
401: IPGELYYLTK DKTDYAWYTT SVKIDEDDFP DQKGLKTILR VASLGHALIV YVNGEYAGKA HGRHEMKSFE FAKPVNFKTG DNRISILGVL TGLPDSGSYM
501: EHRFAGPRAI SIIGLKSGTR DLTENNEWGH LAGLEGEKKE VYTEEGSKKV KWEKDGKRKP LTWYKTYFET PEGVNAVAIR MKAMGKGLIW VNGIGVGRYW
601: MSFLSPLGEP TQTEYHIPRS FMKGEKKKNM LVILEEEPGV KLESIDFVLV NRDTICSNVG EDYPVSVKSW KREGPKIVSR SKDMRLKAVM RCPPEKQMVE
701: VQFASFGDPT GTCGNFTMGK CSASKSKEVV EKECLGRNYC SIVVARETFG DKGCPEIVKT LAVQVKCEKK EGKQDEKKKK EDKDEEEEDD EDDDEEEEEE
801: DKENKDTKDM ENKNQDM

Arabidopsis Description

BGAL14Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:F4JUE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.