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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053225_P005 Maize golgi, vacuole 93.28 93.5
Zm00001d032022_P003 Maize golgi, vacuole 90.8 90.59
HORVU7Hr1G057460.1 Barley golgi 73.94 75.36
TraesCS7D01G272600.1 Wheat golgi, vacuole 73.35 74.05
Os08t0549200-01 Rice plasma membrane 73.23 73.23
TraesCS7A01G272400.2 Wheat vacuole 72.76 72.33
TraesCS7B01G169700.1 Wheat vacuole 73.35 71.41
GSMUA_AchrUn_... Banana extracellular, vacuole 57.67 59.93
KXG36088 Sorghum endoplasmic reticulum, golgi, vacuole 59.08 59.86
GSMUA_Achr1P14790_001 Banana vacuole 57.31 58.91
GSMUA_Achr1P26480_001 Banana vacuole 56.37 58.79
GSMUA_Achr4P05130_001 Banana golgi, plastid, vacuole 54.48 55.07
VIT_03s0038g02360.t01 Wine grape extracellular, golgi 53.3 54.26
Solyc01g111540.2.1 Tomato unclear 52.24 53.31
PGSC0003DMT400015841 Potato endoplasmic reticulum, golgi, vacuole 50.24 52.66
Solyc10g055470.1.1 Tomato vacuole 51.18 52.35
KRH60700 Soybean extracellular, golgi, vacuole 51.89 52.13
KRH24309 Soybean golgi, vacuole 51.77 52.08
KRH29286 Soybean extracellular, golgi, vacuole 51.53 51.9
PGSC0003DMT400031178 Potato vacuole 50.35 51.51
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 46.93 51.03
Bra013052.1-P Field mustard golgi, vacuole 50.35 50.47
Bra001991.1-P Field mustard golgi, vacuole 48.23 50.37
CDY40650 Canola vacuole 50.0 50.24
CDX69103 Canola vacuole 50.0 50.24
Bra017687.1-P Field mustard vacuole 50.0 50.24
AT2G16730.1 Thale cress extracellular, golgi, vacuole 50.24 50.24
CDX75479 Canola vacuole 50.0 50.18
Bra011577.1-P Field mustard vacuole 49.76 49.94
CDX72512 Canola vacuole 49.65 49.88
AT4G35010.1 Thale cress vacuole 49.41 49.59
CDY70118 Canola cytosol 33.73 48.15
CDX72747 Canola vacuole 49.65 47.52
CDY22419 Canola cytosol 50.0 44.35
Bra033571.1-P Field mustard cytosol 50.0 44.35
KXG22057 Sorghum vacuole 43.16 43.78
CDY02241 Canola golgi, vacuole 50.35 43.17
EER92805 Sorghum vacuole 41.04 41.33
EES01845 Sorghum endoplasmic reticulum, golgi, vacuole 40.92 41.16
OQU87043 Sorghum golgi, vacuole 40.09 41.11
EES06516 Sorghum mitochondrion, plastid 35.85 41.08
EER88554 Sorghum golgi, vacuole 34.32 40.14
EER92534 Sorghum endoplasmic reticulum, golgi 40.68 40.12
EES03081 Sorghum extracellular 38.92 39.76
AT4G38590.2 Thale cress golgi, vacuole 49.17 39.64
CDX89744 Canola vacuole 50.24 39.23
EES16726 Sorghum extracellular 38.21 35.1
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80UniProt:A0A1B6PIB8ncoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979EnsemblPlants:KXG25431
ProteinID:KXG25431ProteinID:KXG25431.1InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140PRINTS:PR00742
ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF52MetaCyc:PWY-6807EnsemblPlantsGene:SORBI_3007G176900
SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081ABCB3SEG:seg
Description
hypothetical protein
Coordinates
chr7:-:61068773..61073549
Molecular Weight (calculated)
95516.9 Da
IEP (calculated)
9.120
GRAVY (calculated)
-0.351
Length
848 amino acids
Sequence
(BLAST)
001: MHVDMSHRVR LAAALVVVAA LAAALAPGAA AAWQLTKNGT VISYDRRSLM VDGRREIFFS GSIHYPRSPP DMWPELIAKA KEGGLNTIET YVFWNIHEPE
101: KGQFNFEGRY DMVKFFKLIQ EHDMFAMVRL GPFIQAEWNH GGLPYWLREI PDIVFRTNNE PYKMHMETFV KIVIKRLKDA NLFASQGGPI ILAQIENEYQ
201: HLEAAFKEEG TKYIHWAAQM AIGTNIGIPW IMCKQTKAPG DVIPTCNGRN CGDTWPGPMN KTMPLLWTEN WTAQYRVFGD PPSQRSAEDI AFAVARFFSV
301: GGTMTNYYMY HGGTNFGRTA AAFVMPKYYD EAPLDEFGLY KEPKWGHLRD LHLALKLCKK ALLWGKPSTE KLGKQLEARV FEIPEQKVCV AFLSNHNTKD
401: DVTLTFRGQP YFVPRHSISI LADCKTVVFG TQHVNAQHNQ RTFHFADQTN QNNVWQMFDE EKVPKYKQAK IRTRKAADLY NLTKDKTDYV WYTSSFKLEP
501: DDMPIRRDIK TVVEVNSHGH ASVAFVNNKF AGCGHGTKMN KAFTLEKPME LKKGVNHVAV LASSMGMMDS GAYLEHRLAG VDRVQITGLN AGTLDLTNNG
601: WGHIVGLVGE QKEIYTEKGM ASVTWKPAVN DKPLTWYKRH FDMPSGEDPI VLDMSTMGKG MMYVNGQGIG RYWMSYKHAL GRPSQQLYHI PRSFLRPKDN
701: VLVLFEEEFG RPDAIMILTV KRDNICTYIS ERNPAHIKSW ERKDSQITAT ADDLKARATL TCPPKKLIQQ VVFASYGNPV GICGNYTIGS CHTPRAKEVV
801: EKSCLGKRTC TLPVSADVYG GDVNCPGTTA TLAVQAKCSK RAPSASAQ
Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)
001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN
Arabidopsis Description
BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.