Factsheet for PGSC0003DMT400031178

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g055470.1.1	Tomato	vacuole	93.24	93.24
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	78.77	80.72
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	64.42	64.11
KRH29286	Soybean	extracellular, golgi, vacuole	60.31	59.38
KRH24309	Soybean	golgi, vacuole	59.95	58.96
KRH60700	Soybean	extracellular, golgi, vacuole	58.5	57.46
GSMUA_AchrUn_...	Banana	extracellular, vacuole	56.45	57.35
GSMUA_Achr1P14790_001	Banana	vacuole	56.69	56.97
GSMUA_Achr1P26480_001	Banana	vacuole	55.25	56.33
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	56.94	55.66
Bra013052.1-P	Field mustard	golgi, vacuole	55.61	54.49
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	51.27	54.49
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	54.89	54.23
Bra001991.1-P	Field mustard	golgi, vacuole	52.96	54.06
AT4G35010.1	Thale cress	vacuole	55.01	53.96
CDX69103	Canola	vacuole	54.89	53.91
CDX75479	Canola	vacuole	54.89	53.85
CDY40650	Canola	vacuole	54.76	53.79
Bra011577.1-P	Field mustard	vacuole	54.76	53.73
CDX72512	Canola	vacuole	54.64	53.67
Bra017687.1-P	Field mustard	vacuole	54.64	53.67
CDY70118	Canola	cytosol	38.24	53.37
CDX72747	Canola	vacuole	56.21	52.6
TraesCS7D01G272600.1	Wheat	golgi, vacuole	52.71	52.02
HORVU7Hr1G057460.1	Barley	golgi	52.11	51.92
Os09t0539200-01	Rice	vacuole	27.38	50.9
TraesCS7A01G272400.2	Wheat	vacuole	52.11	50.64
Zm00001d053225_P005	Maize	golgi, vacuole	51.39	50.35
KXG25431	Sorghum	golgi	51.51	50.35
TraesCS7B01G169700.1	Wheat	vacuole	52.71	50.17
Os08t0549200-01	Rice	plasma membrane	51.15	50.0
Zm00001d032022_P003	Maize	golgi, vacuole	50.9	49.65
Bra033571.1-P	Field mustard	cytosol	56.33	48.85
CDY22419	Canola	cytosol	56.33	48.85
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	48.97	48.39
TraesCS5B01G331300.1	Wheat	golgi, vacuole	48.85	48.27
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	48.49	48.03
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	41.25	47.24
PGSC0003DMT400023852	Potato	extracellular	35.59	46.9
HORVU7Hr1G009630.2	Barley	cytosol	38.96	46.88
TraesCS5D01G336700.2	Wheat	vacuole	47.29	46.72
CDY02241	Canola	golgi, vacuole	55.61	46.61
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	37.52	46.42
PGSC0003DMT400083896	Potato	extracellular	44.03	43.71
PGSC0003DMT400012359	Potato	golgi, vacuole	44.27	43.69
PGSC0003DMT400079498	Potato	vacuole	38.24	43.6
PGSC0003DMT400006654	Potato	golgi, vacuole	44.03	43.56
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	45.36	43.17
AT4G38590.2	Thale cress	golgi, vacuole	54.52	42.97
CDX89744	Canola	vacuole	55.13	42.08
Zm00001d022621_P005	Maize	vacuole	44.87	41.61
PGSC0003DMT400009496	Potato	nucleus, peroxisome, vacuole	27.02	41.4
PGSC0003DMT400009096	Potato	endoplasmic reticulum, golgi, vacuole	42.1	41.3
PGSC0003DMT400020941	Potato	extracellular	41.98	40.85
PGSC0003DMT400057597	Potato	golgi, vacuole	34.14	40.84
PGSC0003DMT400059880	Potato	cytosol	37.64	40.52
PGSC0003DMT400039333	Potato	extracellular, golgi	40.05	39.71
PGSC0003DMT400067956	Potato	extracellular	41.13	38.23
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	19.42	36.02

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:102603381
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
UniProt:M1AVA3	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364	EnsemblPlantsGene:PGSC0003DMG400011941	PGSC:PGSC0003DMG400011941
EnsemblPlants:PGSC0003DMT400031178	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF52
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0002949B56	RefSeq:XP_006366982.1	SEG:seg

Description

Beta-galactosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400011941]

Coordinates

chr10:-:47124275..47128266

Molecular Weight (calculated)

93893.0 Da

IEP (calculated)

7.944

GRAVY (calculated)

-0.426

Length

829 amino acids

Sequence
(BLAST)

001: MAISNRLLSL VLFSLMVTCA FAEKPRGVTY DGRSMIVNGE RELLFSGSIH YPRMPPQMWP DIIRKAKEGG LNLIQTYVFW NIHEPVQGQF NFEGNYDVVK
101: FIKEIARQGL YVTLRIGPYI EAEWNQGGFP YWLREVPNIT FRSYNEPFIY HMKKYSEMVI DLMKKEKLFA PQGGPIIMAQ IENEYNNVQL AYRDNGKKYV
201: EWAANMATSL YDGVPWIMCK QKDAPPHIIN TCNGRHCADT FKGPNGPNKP SLWTENWTAQ YRTFGDPPSQ RAAEDIAFSV ARFFAKNGTL TNYYMYYGGT
301: NYGRTSSSFV TTRYYDEAPL DEFGLFREPK WSHLRDLHRA LRLSRRALLW GTPTVQKVNR DIEITIYEKK GSDCAAFLTN NHTTNPATVK FRGKDYYLPE
401: KSVSILPDCK TVVYNTQTIV SQHNSRNFVA SEKAKGLKWE KYQEKVPTIS ELSLKNREPL ELYTLTKDTS DYAWYSTSIK FDRHDLPMRP DILPVLQIAS
501: MGHALAAFVN GEYIGFGHGN NIEKSFVFQK PIVLKPGTNT ISILAETVGF PNSGAYMEKR FAGPRAITIQ GLMAGTLDIT QNDWGHEVGV FGEKEQLFSE
601: EGAKKVKWTP VTGPTNGAVT WYKTTFEAPE GNNPLAVKMD KMQKGMMWVN GNSLGRYWSS FLSPLGQPTQ FEYHIPRAFL KPTDNVLVVF EETGGNPADI
701: EIQTVNRDTI CSIITEYHPP NVKSWERSGT NFVAIVEDLK TGAHLTCPDD KIIEKVEFAS YGNPDGACGN LIVGTCNSAK SMQVAEEKCL GKNSCTIPIE
801: REIYDEPSKD PCPDIFKTLA VQMKCGNKN

Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)

001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN

Arabidopsis Description

BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.