Factsheet for TraesCS5A01G330900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G331300.1	Wheat	golgi, vacuole	94.99	94.99
TraesCS5D01G336700.2	Wheat	vacuole	91.78	91.78
HORVU7Hr1G009630.2	Barley	cytosol	69.13	84.18
Os09t0539200-01	Rice	vacuole	40.76	76.68
KXG36088	Sorghum	endoplasmic reticulum, golgi, vacuole	75.33	75.51
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	71.63	69.0
Zm00001d022621_P005	Maize	vacuole	71.39	67.0
TraesCS7A01G272400.2	Wheat	vacuole	58.16	57.21
GSMUA_AchrUn_...	Banana	extracellular, vacuole	53.52	55.02
GSMUA_Achr1P26480_001	Banana	vacuole	52.8	54.49
GSMUA_Achr1P14790_001	Banana	vacuole	52.56	53.45
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	50.66	51.02
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	50.77	50.77
Solyc01g111540.2.1	Tomato	unclear	48.99	49.46
KRH29286	Soybean	extracellular, golgi, vacuole	49.23	49.05
PGSC0003DMT400031178	Potato	vacuole	48.39	48.97
KRH24309	Soybean	golgi, vacuole	49.11	48.87
Solyc10g055470.1.1	Tomato	vacuole	48.27	48.85
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	46.84	48.58
KRH60700	Soybean	extracellular, golgi, vacuole	48.75	48.46
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	48.51	48.0
Bra013052.1-P	Field mustard	golgi, vacuole	48.39	47.99
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	44.34	47.69
Bra011577.1-P	Field mustard	vacuole	48.03	47.69
CDX75479	Canola	vacuole	47.91	47.57
CDX69103	Canola	vacuole	47.68	47.39
CDY40650	Canola	vacuole	47.56	47.27
Bra017687.1-P	Field mustard	vacuole	47.56	47.27
AT4G35010.1	Thale cress	vacuole	47.56	47.22
CDX72512	Canola	vacuole	47.44	47.16
Bra001991.1-P	Field mustard	golgi, vacuole	45.41	46.92
CDX72747	Canola	vacuole	47.68	45.15
CDY70118	Canola	cytosol	31.82	44.95
Bra033571.1-P	Field mustard	cytosol	48.03	42.15
CDY22419	Canola	cytosol	48.03	42.15
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	40.64	41.38
CDY02241	Canola	golgi, vacuole	48.39	41.05
TraesCS3A01G386200.1	Wheat	vacuole	40.88	40.64
TraesCS6A01G185400.1	Wheat	golgi, vacuole	34.8	40.33
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	33.97	39.69
TraesCS3A01G386100.3	Wheat	vacuole	39.21	39.59
TraesCS3A01G208600.1	Wheat	plastid	39.33	39.52
TraesCS3A01G386300.1	Wheat	golgi, vacuole	39.57	39.48
TraesCS1A01G024100.1	Wheat	vacuole	38.86	39.37
TraesCS4A01G022500.2	Wheat	golgi, vacuole	38.38	38.15
TraesCS4A01G083700.3	Wheat	extracellular	38.38	37.75
CDX89744	Canola	vacuole	47.91	37.02
AT4G38590.2	Thale cress	golgi, vacuole	46.36	36.98
TraesCS5A01G143600.4	Wheat	plasma membrane	36.47	33.59

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0030246
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF76	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5A01G330900
EnsemblPlants:TraesCS5A01G330900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:540280820..540285706

Molecular Weight (calculated)

94327.9 Da

IEP (calculated)

7.948

GRAVY (calculated)

-0.342

Length

839 amino acids

Sequence
(BLAST)

001: MTAAAALVLA VAVAAALLAG AAEASRPKWN LTKKGTTVTY DKYSLMIDGR RELFFSGAIH YPRSPTQMWP KLLKTAKEGG LNTIETYVFW NAHEPEPGKF
101: NFEGRNDMIK FLKLIQSFGM YAIVRIGPFI QGEWNHGALP YWLREIPHII FRANNEPYKR EMEKFVRFIV QMLKDENLFA SQGGNIILAQ IENEYGNIKK
201: DHITEGDKYL EWAAEMAIST NIGVPWIMCK QSTAPGVVIP TCNGRHCGDT WIMKDENKPH LWTENWTAQF RAFGNDLAQR SAEDIAYSVL RFFAKGGTLV
301: NYYMYYGGTN FGRTGASYVL TGYYDEGPID EYGMPKAPKY GHLRDLHNVI KSYSRAFLEG KQSFELLGQG YEARNFEIPE EKLCLAFISN NNTGEDGTVI
401: FRGDKYYIPS RSVSILADCK HVVYNTKRVF VQHSERSFHK AEKATKNNVW EMFSELIPRY KQTTIRNKEP LEQYNQTKDQ SDYLWYTTSF RLEADDLPIR
501: GDIRPVIAVK STAHAMVGFV NDAFAGNGHG SKKEKFFTFE TPISLRLGVN HLALLSSSMG MKDSGGELVE LKGGIQDCTI QGLNTGTLDL QINGWGHKAK
601: LEGEVKEIYT EKGMGAVKWV PAVSGQAVTW YKRYFDEPDG DDPVVLDMTS MCKGMIFVNG EGMGRYWTSY KTPGKVASQA VYHIPRTFLK SKNNLLVVFE
701: EELGKPEGIL IQTVRRDDIC VFISEHNPAQ IKPWDEHGGQ IKLIAEDHNT RGFLNCPPKK IIQEVVFASF GNPVGSCANF TVGTCHTPNA KEIVAKECLG
801: KKGCVLPVLH TFYGADINCP TTTATLAVQV RCHKKGDPE

Best Arabidopsis Sequence Match ( AT1G77410.1 )
(BLAST)

001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS

Arabidopsis Description

BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.