Factsheet for TraesCS1A01G024100.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G024200.1	Wheat	vacuole	97.46	97.35
TraesCS1B01G030400.1	Wheat	vacuole	97.22	96.87
HORVU1Hr1G003200.1	Barley	golgi, vacuole	93.48	93.25
HORVU1Hr1G003210.2	Barley	golgi, vacuole	92.15	92.26
HORVU2Hr1G057440.2	Barley	vacuole	57.61	91.03
Os06t0628500-00	Rice	extracellular, golgi, vacuole	29.11	81.97
Os10t0330600-01	Rice	extracellular	77.66	77.66
EES03081	Sorghum	extracellular	77.54	77.35
Zm00001d043393_P001	Maize	extracellular	75.85	76.4
Os10t0340600-01	Rice	extracellular, golgi, vacuole	74.28	74.28
CDX98327	Canola	golgi, vacuole	18.96	62.55
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	55.68	58.73
CDY70160	Canola	vacuole	36.84	55.96
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.94	54.77
CDX67790	Canola	vacuole	52.9	53.74
CDY65885	Canola	vacuole	53.26	53.72
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.3	53.58
CDX93659	Canola	vacuole	52.66	53.3
CDY28339	Canola	vacuole	50.48	53.05
CDY34975	Canola	golgi, plasma membrane, vacuole	50.12	52.66
AT1G31740.1	Thale cress	vacuole	49.28	52.37
VIT_11s0016g00680.t01	Wine grape	vacuole	52.29	51.86
PGSC0003DMT400059880	Potato	cytosol	47.83	51.43
CDY69031	Canola	cytosol, plastid, vacuole	38.53	51.37
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	55.31	51.0
KRH19351	Soybean	extracellular, golgi, vacuole	50.85	50.91
Solyc07g042220.1.1	Tomato	unclear	50.24	50.86
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	44.81	50.68
KRH07365	Soybean	extracellular, golgi, vacuole	50.36	50.48
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	50.72	50.42
KRH02579	Soybean	extracellular, golgi, vacuole	51.09	50.12
AT5G20710.1	Thale cress	vacuole	49.64	49.76
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	49.76	49.52
KRH48708	Soybean	vacuole	50.36	49.29
KRH48710	Soybean	vacuole	50.24	49.17
Bra002325.1-P	Field mustard	golgi, vacuole	48.91	48.85
Bra003128.1-P	Field mustard	extracellular, vacuole	41.67	48.8
KRH70131	Soybean	vacuole	49.15	48.74
CDY32304	Canola	cytosol	50.48	47.39
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	40.82	47.08
KRH06832	Soybean	mitochondrion	42.51	46.93
TraesCS6A01G185400.1	Wheat	golgi, vacuole	40.58	46.41
TraesCS4A01G083700.3	Wheat	extracellular	46.86	45.49
KRH38266	Soybean	cytosol, peroxisome	31.88	45.13
TraesCS3A01G208600.1	Wheat	plastid	44.44	44.07
TraesCS3A01G386300.1	Wheat	golgi, vacuole	43.72	43.04
TraesCS3A01G386200.1	Wheat	vacuole	43.0	42.18
TraesCS4A01G022500.2	Wheat	golgi, vacuole	42.75	41.94
CDY53917	Canola	plastid	50.48	40.62
TraesCS5A01G330900.1	Wheat	endoplasmic reticulum, vacuole	39.37	38.86
TraesCS7A01G272400.2	Wheat	vacuole	39.86	38.69
CDX67763	Canola	golgi, plasma membrane, vacuole	35.39	38.0
TraesCS5A01G143600.4	Wheat	plasma membrane	41.18	37.43
TraesCS1A01G267700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.47	36.65
TraesCS3A01G386100.3	Wheat	vacuole	35.87	35.74

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0030246
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364	PRINTS:PR00742
ScanProsite:PS01182	PANTHER:PTHR23421	PANTHER:PTHR23421:SF68	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS1A01G024100	EnsemblPlants:TraesCS1A01G024100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:+:11811939..11815595

Molecular Weight (calculated)

91987.8 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.340

Length

828 amino acids

Sequence
(BLAST)

001: MERAPLLPLL LLLLAAAALG VSGTEVAYND RALVIDGERR IVISGSIHYP RSTPEMWPDL IRKAKEGGLD AIETYVFWNG HEPRRREYNF EGSYDIVRFF
101: KEIQDAGMYA ILRIGPYICG EWNYGGLPAW LREISGMQFR MHNHPFEREM ETFTTLIVDK LKEAKMFAGQ GGPIILSQIE NEYGNIMGKL NNNESASEYI
201: HWCAAMANKQ NVGVPWIMCQ QDDDVPPNVI NTCNGFYCHD WFPKRTDIPK MWTENWTGWF KAWDKPDFHR SAEDVAFSVA MFFQKRGSLQ NYYMYHGGTN
301: FGRTSGGPYI TTSYDYDAPL DEYGNIRQPK YGHLKDLHNV LKSMEKILLH GDYKDTNMSS TNVTVTKYTL DNSSACFISN KFDDREVNVT LDTGATHVVP
401: AWSVSILPDC KTVAYNSAKI KTQTSVMVKR PEVETVREGL AWSWMPENLQ PFMTDEKGNF RKNELLEQIA TSGDQSDYLW YRTSFEHKGE ASYKLHVNTT
501: GHELYAFVNG KLVGKQHSPN GGFVFQMETP VKLHAGKNYI SLLSATIGLK NYGALFEMMP AGIVGGPVKL VDTVTNTTAY DLSNSSWSYK AGLAGEYRET
601: HLDKADDRSQ WSGGLNGTIP VHRPFTWYKA TFEAPAGEEP VVADLLGLGK GVVWVNGNNL GRYWPSYVAA DMGGCKQCDY RGTFKAEGDG LKCLTGCNEP
701: SQRFYHVPRS FLKAGEPNTM VLFEEAGGDP TRVNFHTVAV GAACAEAAEV GDQVALACSH ARTISSVDVA SLGVARGKCG AYEGGCESKA ALAAFTAACL
801: GKESCAVRHT EEFRAGCDSG VLTVQATC

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.