Factsheet for GSMUA_Achr5P11870_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	95.92	83.85
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	59.62	75.61
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	49.94	73.96
CDX98327	Canola	golgi, vacuole	22.55	70.52
Os06t0628500-00	Rice	extracellular, golgi, vacuole	22.93	61.22
CDY70160	Canola	vacuole	42.17	60.73
HORVU2Hr1G057440.2	Barley	vacuole	38.98	58.4
PGSC0003DMT400059880	Potato	cytosol	55.67	56.75
CDY28339	Canola	vacuole	56.82	56.6
CDY34975	Canola	golgi, plasma membrane, vacuole	56.69	56.47
VIT_11s0016g00680.t01	Wine grape	vacuole	60.0	56.41
AT1G31740.1	Thale cress	vacuole	55.54	55.97
Solyc07g042220.1.1	Tomato	unclear	58.22	55.87
KRH19351	Soybean	extracellular, golgi, vacuole	58.73	55.74
TraesCS1A01G024100.1	Wheat	vacuole	58.73	55.68
HORVU1Hr1G003210.2	Barley	golgi, vacuole	58.6	55.62
CDY65885	Canola	vacuole	57.96	55.42
KRH02579	Soybean	extracellular, golgi, vacuole	59.49	55.33
HORVU1Hr1G003200.1	Barley	golgi, vacuole	58.47	55.3
CDX67790	Canola	vacuole	57.2	55.09
EES03081	Sorghum	extracellular	58.22	55.06
TraesCS1D01G024200.1	Wheat	vacuole	58.09	55.01
Zm00001d043393_P001	Maize	extracellular	57.58	54.99
Os10t0330600-01	Rice	extracellular	57.96	54.95
TraesCS1B01G030400.1	Wheat	vacuole	57.96	54.75
CDX93659	Canola	vacuole	56.69	54.4
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	57.96	54.1
KRH07365	Soybean	extracellular, golgi, vacuole	56.31	53.51
Os10t0340600-01	Rice	extracellular, golgi, vacuole	56.31	53.38
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	56.18	52.94
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	55.54	52.4
AT5G20710.1	Thale cress	vacuole	54.78	52.06
Bra003128.1-P	Field mustard	extracellular, vacuole	46.11	51.2
Bra002325.1-P	Field mustard	golgi, vacuole	54.01	51.15
CDY69031	Canola	cytosol, plastid, vacuole	40.38	51.05
KRH70131	Soybean	vacuole	54.14	50.9
KRH48708	Soybean	vacuole	54.65	50.71
KRH48710	Soybean	vacuole	54.52	50.59
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	47.13	50.55
CDY32304	Canola	cytosol	56.18	50.0
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	51.47	48.1
KRH38266	Soybean	cytosol, peroxisome	35.54	47.69
KRH06832	Soybean	mitochondrion	45.22	47.33
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	51.97	46.84
GSMUA_Achr7P08970_001	Banana	vacuole	42.93	46.16
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	43.18	46.06
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	42.93	45.79
GSMUA_Achr7P08940_001	Banana	vacuole	42.55	45.63
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	42.42	45.37
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	43.31	44.74
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	45.86	43.69
CDY53917	Canola	plastid	56.82	43.34
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	46.88	43.14
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	47.13	42.63
CDX67763	Canola	golgi, plasma membrane, vacuole	41.27	42.02
GSMUA_Achr11P...	Banana	golgi, vacuole	42.93	41.25
GSMUA_Achr1P26480_001	Banana	vacuole	42.55	41.08
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	45.86	41.0
GSMUA_Achr1P14790_001	Banana	vacuole	42.42	40.36
GSMUA_AchrUn_...	Banana	extracellular, vacuole	41.66	40.07
GSMUA_Achr2P16780_001	Banana	plastid	42.93	40.07
GSMUA_Achr4P06620_001	Banana	cytosol	32.61	39.75
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	40.38	37.78

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr5G11870_001	EnsemblPlants:GSMUA_Achr5P11870_001	EnsemblPlants:GSMUA_Achr5T11870_001	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	UniProt:M0SXR6	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182
PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF88	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI000296D65C	:	:	:	:	:

Description

Beta-galactosidase 13 [Source:GMGC_GENE;Acc:GSMUA_Achr5G11870_001]

Coordinates

chr5:+:8597945..8601851

Molecular Weight (calculated)

87112.8 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.348

Length

785 amino acids

Sequence
(BLAST)

001: MEISKCCLLL LVASSLYYIV CSTTVSHDGR ALVIDGQRRV IFSGSIHYPR STPEMWPDLI RKSKEGGLDA IETYVFWNGH EPRRREYNFE GNYDLIRFLK
101: EVQNAGLYAI LRIGPYVCAE WNYGGLPVWL YKIPGMQTRT DNQPWKDEMQ NFTTLIVDKV KEERLLATQG GPIILLQIEN EYGNGDIERQ YGEAGPRYIN
201: WCANMAESLV SDVPWIMCQQ SDAPQPMINT CNGFSGCDGF TPNNGNSPKI WTENWTGWFK NWGSPDPHRP VEEVAFQVAR FFQSNGTVQN YYMYHGGTNF
301: GRTSGGPYIV TSYDYDAPLD EYGNIRQPKW GHLKELHASV KLMEKALTYG EVVEDHLGNG LTITKFSGDG IVPGCFLSNQ NSTVDATISF QGTKYFLPAW
401: SVSILPDCEK EVYNTAKVKT QTSIMVKKKD NAGDQSKDLR WSWKPERLHN SAKGFGSSFT VNKLLEQKTT TVDASDYLWY TTNVEVSKKE SFTLSVSTTG
501: HILYAFVNGR LVGSEYATGG SYNFIFERKV TFKPGKNQIS LLSATVGLRN YGAFYDNTPV GIVGGPVKLI GKNNTILDLS ESNWSYKIGL DGEVRKLQLD
601: EKRWHSGVIP TNRPFTWYKT TFQAPLGSEP VVVDLLGLGK GEAWVNGNSL EASQRWYHVP RSFLKRGEPN TLTLFEEAGG NPNQVNFQTV TVGTACTSAS
701: EGDVLSLSCQ GGRTISSVDF ATFGEPDGTC GAYGSGGCVS DEAVAILKDA CLGRDSCSIQ ISDKIGTSCA KLASPRKLVV QVTCS

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.