Factsheet for GSMUA_Achr2P21790_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98327	Canola	golgi, vacuole	19.74	66.14
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	54.1	57.96
PGSC0003DMT400059880	Potato	cytosol	53.03	57.92
VIT_11s0016g00680.t01	Wine grape	vacuole	57.31	57.72
KRH19351	Soybean	extracellular, golgi, vacuole	56.72	57.68
KRH07365	Soybean	extracellular, golgi, vacuole	56.6	57.63
CDY70160	Canola	vacuole	37.22	57.43
KRH02579	Soybean	extracellular, golgi, vacuole	56.96	56.75
CDY65885	Canola	vacuole	54.93	56.27
AT1G31740.1	Thale cress	vacuole	52.08	56.23
Solyc07g042220.1.1	Tomato	unclear	54.58	56.11
CDY28339	Canola	vacuole	52.44	55.96
CDX67790	Canola	vacuole	54.22	55.95
CDX93659	Canola	vacuole	54.34	55.87
CDY34975	Canola	golgi, plasma membrane, vacuole	52.2	55.71
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.9	55.57
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.84	55.28
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	54.22	54.81
Bra002325.1-P	Field mustard	golgi, vacuole	53.75	54.52
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	53.98	54.5
KRH70131	Soybean	vacuole	53.86	54.25
AT5G20710.1	Thale cress	vacuole	53.27	54.24
CDY69031	Canola	cytosol, plastid, vacuole	39.48	53.46
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	46.49	53.42
KRH48710	Soybean	vacuole	51.96	51.65
KRH48708	Soybean	vacuole	51.96	51.65
Bra003128.1-P	Field mustard	extracellular, vacuole	42.93	51.06
KRH38266	Soybean	cytosol, peroxisome	35.43	50.94
GSMUA_Achr7P08970_001	Banana	vacuole	43.88	50.55
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	53.86	50.45
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	44.11	50.41
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	44.0	50.27
CDY32304	Canola	cytosol	52.68	50.23
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	49.94	50.0
GSMUA_Achr7P08940_001	Banana	vacuole	43.4	49.86
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	43.28	49.59
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	51.01	49.25
KRH06832	Soybean	mitochondrion	43.64	48.93
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	47.09	48.06
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	41.97	46.45
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	46.85	46.19
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	46.37	44.93
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	45.9	43.96
GSMUA_Achr4P06620_001	Banana	cytosol	33.65	43.94
GSMUA_Achr2P16780_001	Banana	plastid	43.28	43.28
CDY53917	Canola	plastid	52.32	42.76
GSMUA_Achr11P...	Banana	golgi, vacuole	41.38	42.59
GSMUA_Achr1P14790_001	Banana	vacuole	40.78	41.58
GSMUA_AchrUn_...	Banana	extracellular, vacuole	39.95	41.18
GSMUA_Achr1P26480_001	Banana	vacuole	39.48	40.84
CDX67763	Canola	golgi, plasma membrane, vacuole	36.5	39.82
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	38.53	38.62

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	EnsemblPlantsGene:GSMUA_Achr2G21790_001	EnsemblPlants:GSMUA_Achr2P21790_001	EnsemblPlants:GSMUA_Achr2T21790_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	UniProt:M0SA20
PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF88
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0002957102	SEG:seg	:

Description

Beta-galactosidase [Source:GMGC_GENE;Acc:GSMUA_Achr2G21790_001]

Coordinates

chr2:+:21141673..21148644

Molecular Weight (calculated)

93295.8 Da

IEP (calculated)

7.871

GRAVY (calculated)

-0.315

Length

841 amino acids

Sequence
(BLAST)

001: MVGPSRALLL VIAIACCLSS SAMNVTYDGR AIIIDGQRRV LISGSIHYAR STAEMWPDLI QKAKEGGVDA IDTYIFWNAH EPSRGEYNFE GNLNFIKFIK
101: IVQDAGLYVV LRIGPYVCAE WNYGGFPVWL HQIPGIELRT NNDIFKAEMQ TFTTLIVSMI KKEKLLAPEG GPVIITQVGK QLAFDGLIEN EYGNFIKKYG
201: DSGKKYIQWC ADMAKSLNVN VPWIMCQQAD APSPMINTCN GFYCHKFKPN RPSIPKMWTE NWTGWFKGWG ESQPHRPVED VAYAVANFFA SGGTFQNYYM
301: YHGGTNFGRT SGGPYLTTSY DYDAPLDEYG NIRQPKWGHL KQLHSAIKMM EKILTYGEVN TTQLGNALAV TKFSINETSS GCFLTNANQS NDANATYNGN
401: TYLVPSRSIS ILPDCEKEVY NTAKVTTQTS LMVNKPVKST KLSWKWHSEI MEDTLNGKGS FSNESLLEQI MTTGDASDYL WYMTSVTLNK SSTSWRKKMN
501: LRVKTKGHIL HAYVNNRLIG SGYATKGSYK FDFEQEAELR DGHNFITLLS ATDGLANNFG NSMLVWCTGQ NYGAFFDLQK AGIDGGPVEL IGNGKEKIDL
601: TKNKWSYKIG LNGEMSKIYL PSASHGLNWN SDRLPINKSM TWYKTTFEVP DGNDSLVLDL QGMGKGHAWV NGQSIGRYWP SFLAADSGCE PCDYRQKYDS
701: DKCRTECGMP SQRWYHVPKS FTTKGPNTLI LFEEVGGDPS QVSLQTVTIG TVCANVVEGS ILELSCQGSR SFSKIQFASF GNPEGSCGSF KKGSCEAPDA
801: LAVVKKACIG RSNCSINVTA NAFGPSECSD LSRRLAVQAI C

Best Arabidopsis Sequence Match ( AT5G20710.1 )
(BLAST)

001: MKMKHFTRLL SLFFILITSL SLAKSTIVSH DERAITINGK RRILLSGSIH YPRSTADMWP DLINKAKDGG LDAIETYVFW NAHEPKRREY DFSGNLDVVR
101: FIKTIQDAGL YSVLRIGPYV CAEWNYGGFP VWLHNMPNMK FRTVNPSFMN EMQNFTTKIV KMMKEEKLFA SQGGPIILAQ IENEYGNVIS SYGAEGKAYI
201: DWCANMANSL DIGVPWLMCQ QPNAPQPMLE TCNGFYCDQY EPTNPSTPKM WTENWTGWFK NWGGKHPYRT AEDLAFSVAR FFQTGGTFQN YYMYHGGTNF
301: GRVAGGPYIT TSYDYHAPLD EFGNLNQPKW GHLKQLHTVL KSMEKSLTYG NISRIDLGNS IKATIYTTKE GSSCFIGNVN ATADALVNFK GKDYHVPAWS
401: VSVLPDCDKE AYNTAKVNTQ TSIMTEDSSK PERLEWTWRP ESAQKMILKG SGDLIAKGLV DQKDVTNDAS DYLWYMTRLH LDKKDPLWSR NMTLRVHSNA
501: HVLHAYVNGK YVGNQFVKDG KFDYRFERKV NHLVHGTNHI SLLSVSVGLQ NYGPFFESGP TGINGPVSLV GYKGEETIEK DLSQHQWDYK IGLNGYNDKL
601: FSIKSVGHQK WANEKLPTGR MLTWYKAKFK APLGKEPVIV DLNGLGKGEA WINGQSIGRY WPSFNSSDDG CKDECDYRGA YGSDKCAFMC GKPTQRWYHV
701: PRSFLNASGH NTITLFEEMG GNPSMVNFKT VVVGTVCARA HEHNKVELSC HNRPISAVKF ASFGNPLGHC GSFAVGTCQG DKDAAKTVAK ECVGKLNCTV
801: NVSSDTFGST LDCGDSPKKL AVELEC

Arabidopsis Description

BGAL7Beta-galactosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.