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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98327 Canola golgi, vacuole 44.04 95.62
CDY28339 Canola vacuole 95.23 65.86
CDY34975 Canola golgi, plasma membrane, vacuole 95.05 65.74
CDX67790 Canola vacuole 95.78 64.05
CDX67763 Canola golgi, plasma membrane, vacuole 89.91 63.55
CDX88594 Canola golgi, vacuole 36.33 60.92
CDX93659 Canola vacuole 91.19 60.76
AT1G31740.1 Thale cress vacuole 82.75 57.89
Bra003128.1-P Field mustard extracellular, vacuole 73.21 56.44
Os06t0628500-00 Rice extracellular, golgi, vacuole 30.28 56.12
CDY65885 Canola vacuole 84.4 56.03
CDY32304 Canola cytosol 90.09 55.67
CDX76255 Canola extracellular 13.03 55.47
HORVU2Hr1G057440.2 Barley vacuole 52.84 54.96
CDY69031 Canola cytosol, plastid, vacuole 61.47 53.95
GSMUA_Achr4P25980_001 Banana extracellular, golgi, vacuole 57.98 51.05
GSMUA_Achr4P26030_001 Banana cytosol, peroxisome, vacuole 48.81 50.19
CDY53917 Canola plastid 92.84 49.17
Solyc07g042220.1.1 Tomato unclear 68.81 45.84
PGSC0003DMT400059880 Potato cytosol 64.22 45.45
VIT_11s0016g00680.t01 Wine grape vacuole 68.81 44.91
KRH19351 Soybean extracellular, golgi, vacuole 67.89 44.74
KRH02579 Soybean extracellular, golgi, vacuole 65.32 42.18
GSMUA_Achr5P11870_001 Banana extracellular, golgi 60.73 42.17
CDX94367 Canola mitochondrion 49.91 38.2
CDX95380 Canola vacuole 50.46 37.83
CDY11899 Canola golgi, vacuole 50.09 37.81
CDX92753 Canola golgi, vacuole 49.17 37.64
CDY36028 Canola plastid 48.81 37.36
CDY42755 Canola vacuole 48.62 37.22
GSMUA_Achr2P21790_001 Banana golgi, vacuole 57.43 37.22
HORVU1Hr1G003210.2 Barley golgi, vacuole 56.15 37.0
CDY53959 Canola golgi, vacuole 49.54 36.99
CDY47949 Canola golgi, vacuole 49.54 36.99
TraesCS1A01G024100.1 Wheat vacuole 55.96 36.84
CDY20708 Canola golgi, vacuole 48.62 36.7
CDY32919 Canola golgi, vacuole 48.62 36.7
HORVU1Hr1G003200.1 Barley golgi, vacuole 55.78 36.63
Zm00001d043393_P001 Maize extracellular 55.23 36.62
Os10t0330600-01 Rice extracellular 55.6 36.59
TraesCS1D01G024200.1 Wheat vacuole 55.6 36.55
GSMUA_Achr5P11850_001 Banana extracellular, golgi 60.18 36.53
TraesCS1B01G030400.1 Wheat vacuole 55.6 36.46
EES03081 Sorghum extracellular 54.86 36.02
Os10t0340600-01 Rice extracellular, golgi, vacuole 54.5 35.87
CDY43757 Canola golgi, vacuole 48.07 35.36
CDX84446 Canola golgi, vacuole 47.71 35.09
CDX89360 Canola mitochondrion 44.59 34.76
CDY39845 Canola vacuole 45.69 34.58
CDY15749 Canola golgi, vacuole 52.84 34.12
CDX84445 Canola vacuole 44.95 34.03
CDX97513 Canola golgi, vacuole 52.11 33.81
CDY23637 Canola golgi, vacuole 51.93 33.73
CDX76254 Canola golgi, nucleus, vacuole 36.33 33.67
CDY04567 Canola golgi, vacuole 52.29 33.53
CDY51738 Canola golgi, vacuole 51.56 33.49
CDY37486 Canola golgi, vacuole 51.38 33.37
CDY31349 Canola vacuole 45.32 33.33
CDY31204 Canola golgi, vacuole 51.56 33.29
CDX83288 Canola golgi, vacuole 51.56 33.25
CDX75569 Canola golgi, vacuole 48.99 32.29
CDX69219 Canola vacuole 48.44 32.04
CDY59693 Canola vacuole 48.99 31.19
CDY19166 Canola golgi, vacuole 47.52 29.17
CDY23785 Canola vacuole 47.52 29.0
CDX75479 Canola vacuole 44.59 28.76
CDX69103 Canola vacuole 44.22 28.55
CDX72512 Canola vacuole 42.57 27.49
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 39.27 27.44
CDY40650 Canola vacuole 42.39 27.37
CDY43756 Canola cytosol, nucleus, peroxisome 24.77 26.47
CDX72747 Canola vacuole 42.02 25.85
CDY22419 Canola cytosol 42.39 24.16
CDY02241 Canola golgi, vacuole 41.65 22.95
CDX89744 Canola vacuole 42.02 21.09
CDY70594 Canola cytosol 15.96 20.91
CDY69471 Canola cytosol 15.96 20.91
CDY70118 Canola cytosol 21.83 20.03
CDY59725 Canola cytosol 4.4 7.69
CDY59691 Canola cytosol, nucleus, vacuole 4.4 6.82
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078JUM4UniProt:A0A078JUM4EnsemblPlants:CDY70160ProteinID:CDY70160
ProteinID:CDY70160.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00096826001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301PRINTS:PR00742
ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF88MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445
SignalP:SignalP-noTMUniParc:UPI0004EF1D74::::
Description
BnaCnng66980DBnaCnng66980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUM4]
Coordinates
chrLK041341:-:52..2889
Molecular Weight (calculated)
61695.2 Da
IEP (calculated)
7.143
GRAVY (calculated)
-0.384
Length
545 amino acids
Sequence
(BLAST)
001: MVSLRFLLCF LCVSSVYATI VSHDGRAITI DGHRRVLLSG SIHYPRSTPE MWPDLIKKGK EGGLDAIETY VFWNAHEPTR RQYDFSGKLD LIRFLKTIQD
101: EGLYAVLRIG PYACAEGFPV WLHNMPGMVF RTTNKAYMDE MQNFTTMIVD MVKKEKLFAS QGGPIILAQI ENEYGNVMGP YGESGKAYIK WCAHMAQSLD
201: VGVPWIMCQQ NDAPQPMLNT CNGFYCDNFV PNNPNTPKMW TENWTGWFKQ WGGKNPHRTT EDVAFSVARF FQRGGTFNNY YMYHGGTNFD RTAGGPYITT
301: SYDYDAPLDE YGNLSQPKYG HLKQLHDVLH SIEKTLTYGN ISTIDFGNSA SATIYKTEEG SSCFFGNGNE NSDATISFQG ESYVVPAWSV TILPDCKNEA
401: YNTAKITTQT SMMVKKPNEA EDTPSTLKWS WRPENMDNFL LKGKGESTQT QLFDQKVVTN DQSDYLWYMT TVKFKKRDPF VGKTMSLRIN STAHVLYVFV
501: NGNIIGYQHA ENGKFNYVFE KDVKFKSGRN VIALLSITVG LAVSS
Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)
001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC
Arabidopsis Description
BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.