CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36360.1	CDY03088	AT2G01950.1	19000166
AT4G36360.1	CDY17621	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69219	Canola	vacuole	92.06	95.63
CDX75569	Canola	golgi, vacuole	91.82	95.04
CDY59691	Canola	cytosol, nucleus, vacuole	38.43	93.47
AT4G36360.1	Thale cress	endoplasmic reticulum, golgi, vacuole	93.34	93.34
CDY59725	Canola	cytosol	33.41	91.67
KRH76716	Soybean	nucleus	77.69	78.33
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	76.99	77.99
KRH28740	Soybean	nucleus	77.45	77.73
KRH69834	Soybean	extracellular, golgi	76.28	77.0
KRH08131	Soybean	nucleus	76.17	76.89
PGSC0003DMT400009096	Potato	endoplasmic reticulum, golgi, vacuole	73.6	74.56
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	73.36	74.32
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	70.21	70.46
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	70.56	69.59
EER92805	Sorghum	vacuole	68.11	69.24
Os03t0165400-01	Rice	vacuole	67.06	68.25
GSMUA_Achr4P06620_001	Banana	cytosol	51.17	68.01
TraesCS4B01G280900.1	Wheat	golgi, vacuole	66.94	67.81
TraesCS4A01G022500.2	Wheat	golgi, vacuole	66.82	67.77
TraesCS4D01G279400.4	Wheat	vacuole	66.94	67.57
CDY53959	Canola	golgi, vacuole	57.59	67.53
HORVU4Hr1G074280.4	Barley	vacuole	66.82	67.53
CDY47949	Canola	golgi, vacuole	57.24	67.12
CDY36028	Canola	plastid	55.49	66.71
Zm00001d048440_P003	Maize	vacuole	67.52	66.51
CDX88594	Canola	golgi, vacuole	25.0	65.85
CDX97513	Canola	golgi, vacuole	62.27	63.45
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	67.87	63.29
CDY51738	Canola	golgi, vacuole	61.92	63.17
CDY23637	Canola	golgi, vacuole	61.92	63.17
CDY37486	Canola	golgi, vacuole	61.1	62.34
CDX76255	Canola	extracellular	9.23	61.72
CDX94367	Canola	mitochondrion	51.05	61.38
CDY11899	Canola	golgi, vacuole	50.7	60.11
CDX95380	Canola	vacuole	50.7	59.7
CDX92753	Canola	golgi, vacuole	49.07	58.99
CDY42755	Canola	vacuole	48.95	58.85
CDY32919	Canola	golgi, vacuole	49.53	58.73
CDX76254	Canola	golgi, nucleus, vacuole	40.3	58.67
CDY20708	Canola	golgi, vacuole	49.3	58.45
CDX89360	Canola	mitochondrion	47.66	58.37
CDX98327	Canola	golgi, vacuole	16.71	56.97
CDY70594	Canola	cytosol	27.1	55.77
CDY69471	Canola	cytosol	26.87	55.29
CDY15749	Canola	golgi, vacuole	53.62	54.38
CDX83288	Canola	golgi, vacuole	53.39	54.08
CDY31204	Canola	golgi, vacuole	53.27	54.03
CDY04567	Canola	golgi, vacuole	53.5	53.88
CDY43757	Canola	golgi, vacuole	44.04	50.88
CDX84446	Canola	golgi, vacuole	43.57	50.34
CDY70160	Canola	vacuole	31.19	48.99
CDY39845	Canola	vacuole	40.77	48.47
CDX84445	Canola	vacuole	40.19	47.78
CDY65885	Canola	vacuole	45.68	47.62
CDX67790	Canola	vacuole	44.98	47.24
CDY19166	Canola	golgi, vacuole	48.83	47.07
CDY34975	Canola	golgi, plasma membrane, vacuole	43.22	46.95
CDY28339	Canola	vacuole	43.22	46.95
CDY31349	Canola	vacuole	40.54	46.83
CDX93659	Canola	vacuole	44.74	46.82
CDY23785	Canola	vacuole	48.72	46.7
CDY69031	Canola	cytosol, plastid, vacuole	32.59	44.93
CDY43756	Canola	cytosol, nucleus, peroxisome	26.29	44.12
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	38.2	41.92
CDX75479	Canola	vacuole	41.12	41.66
CDX69103	Canola	vacuole	41.0	41.59
CDY32304	Canola	cytosol	42.52	41.27
CDY40650	Canola	vacuole	40.65	41.23
CDX72512	Canola	vacuole	40.54	41.11
CDX72747	Canola	vacuole	40.54	39.16
CDY70118	Canola	cytosol	26.99	38.89
CDY22419	Canola	cytosol	40.54	36.3
CDY53917	Canola	plastid	42.76	35.57
CDY02241	Canola	golgi, vacuole	40.77	35.29
CDX67763	Canola	golgi, plasma membrane, vacuole	30.14	33.46
CDX89744	Canola	vacuole	40.65	32.04

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078J5U8	UniProt:A0A078J5U8	EnsemblPlants:CDY59693
ProteinID:CDY59693	ProteinID:CDY59693.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00027602001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF79	MetaCyc:PWY-6807
SUPFAM:SSF49785	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0004EF10F9	SEG:seg	:

Description

BnaC07g51120DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078J5U8]

Coordinates

chrLK033796:-:12118..16879

Molecular Weight (calculated)

95279.1 Da

IEP (calculated)

7.310

GRAVY (calculated)

-0.307

Length

856 amino acids

Sequence
(BLAST)

001: MRSMGTRDST PRLILWLCLG LLILVVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEGLIQK AKDGGVDVIE TYVFWNLHEP SPGKYDFDGR
101: NDLVRFVKTV HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKKAMQGF TERIVELMKS ENLYESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPTIWTEAW SGWFTEFGGP MHHRPVQDLA FAVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHKAIKMCEK TLVSTDPVVT SLGNKQQAHV YSSESGDCSA FLANYDTESA SRVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTNTANF QWQSYLEDLS SLDDSSTFTT QGLLEQINVT RDTSDYLWYM TSVDIGETES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRENRRF TYRGKINLHS GTNKIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KRDLSWQKWT YLVGLRGEAM
601: NLAYPTNTPS IGWMDASLTV QKPQPLTWHK TYFDASEGDE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCDHCSYTG TYKPNKCLSG CGQPTQRYYH
701: VPRSWLKPSQ NLLVIFEEIE GNPSAVSLVK RSVSGVCAEV SEYHPNIKNW QLESYGKGQT FHRPKVHLKC SPGQAISAIK FASFGTPLGK CGSYQEGECH
801: AATSYAILEK KCVGKARCAV TISNTNFGKD PCPNVLKRLT VEAVCSPETS LTSWKP

Best Arabidopsis Sequence Match ( AT4G36360.1 )
(BLAST)

001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP

Arabidopsis Description

BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.