CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42755	Canola	vacuole	96.91	96.91
CDX94367	Canola	mitochondrion	86.24	86.24
AT4G26140.7	Thale cress	vacuole	88.34	83.53
CDX88594	Canola	golgi, vacuole	37.92	83.08
CDX89360	Canola	mitochondrion	80.2	81.69
CDX76254	Canola	golgi, nucleus, vacuole	65.17	78.91
CDY11899	Canola	golgi, vacuole	79.63	78.53
CDX95380	Canola	vacuole	79.21	77.58
CDY32919	Canola	golgi, vacuole	77.67	76.59
CDY20708	Canola	golgi, vacuole	77.11	76.04
CDY70594	Canola	cytosol	43.82	75.0
CDY69471	Canola	cytosol	43.82	75.0
CDX76255	Canola	extracellular	13.06	72.66
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	64.33	68.36
KRH37385	Soybean	nucleus	68.26	67.41
KRH12385	Soybean	vacuole	67.98	67.13
Solyc12g008840.1.1	Tomato	extracellular	68.12	66.99
GSMUA_Achr7P08970_001	Banana	vacuole	65.59	63.97
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	65.17	63.22
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	65.03	62.91
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	64.61	62.5
GSMUA_Achr7P08940_001	Banana	vacuole	64.19	62.43
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	62.92	62.4
Os06t0573600-01	Rice	plasma membrane, vacuole	62.64	62.38
TraesCS7D01G359500.1	Wheat	golgi	62.64	62.2
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	62.5	61.98
Zm00001d046357_P001	Maize	extracellular	62.36	61.5
EER88554	Sorghum	golgi, vacuole	62.5	61.38
TraesCS6A01G185400.1	Wheat	golgi, vacuole	61.24	60.22
TraesCS6D01G172400.1	Wheat	golgi, vacuole	61.1	60.0
TraesCS6B01G214100.1	Wheat	golgi, vacuole	60.81	59.72
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	62.64	59.71
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	69.94	59.36
CDY36028	Canola	plastid	59.27	59.27
KRH02714	Soybean	golgi, vacuole	69.66	59.12
Os02t0219200-01	Rice	peroxisome, vacuole	41.29	58.8
EES06516	Sorghum	mitochondrion, plastid	60.81	58.51
VIT_11s0016g02200.t01	Wine grape	vacuole	68.68	58.49
CDY47949	Canola	golgi, vacuole	59.69	58.22
CDY53959	Canola	golgi, vacuole	59.55	58.08
CDY23637	Canola	golgi, vacuole	67.84	57.57
CDX97513	Canola	golgi, vacuole	67.84	57.5
HORVU6Hr1G039490.6	Barley	plastid	61.24	57.07
CDX98327	Canola	golgi, vacuole	20.08	56.97
CDY51738	Canola	golgi, vacuole	66.85	56.73
CDY37486	Canola	golgi, vacuole	66.43	56.38
OQU87043	Sorghum	golgi, vacuole	63.62	54.78
Os01t0580200-01	Rice	golgi, vacuole	63.34	54.53
Zm00001d044290_P005	Maize	golgi, vacuole	63.48	54.46
GSMUA_Achr2P16780_001	Banana	plastid	64.04	54.22
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	62.36	53.88
HORVU3Hr1G050450.12	Barley	golgi, vacuole	62.78	53.79
TraesCS3A01G208600.1	Wheat	plastid	62.78	53.53
TraesCS3D01G211500.2	Wheat	golgi, vacuole	62.78	53.53
TraesCS3B01G235100.1	Wheat	golgi, vacuole	62.36	53.05
Zm00001d053585_P002	Maize	plastid	60.25	51.75
CDX75569	Canola	golgi, vacuole	58.43	50.3
CDX69219	Canola	vacuole	57.72	49.88
CDY70160	Canola	vacuole	37.64	49.17
CDX84446	Canola	golgi, vacuole	51.12	49.12
CDY59693	Canola	vacuole	58.99	49.07
CDY43757	Canola	golgi, vacuole	50.98	48.99
CDY15749	Canola	golgi, vacuole	55.48	46.8
CDY31204	Canola	golgi, vacuole	54.63	46.09
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	28.79	45.86
CDY04567	Canola	golgi, vacuole	54.63	45.76
CDX83288	Canola	golgi, vacuole	54.21	45.68
CDY39845	Canola	vacuole	46.07	45.56
CDY31349	Canola	vacuole	46.21	44.4
CDX84445	Canola	vacuole	44.52	44.03
CDY43756	Canola	cytosol, nucleus, peroxisome	30.2	42.16
CDY34975	Canola	golgi, plasma membrane, vacuole	46.49	42.01
CDY28339	Canola	vacuole	46.49	42.01
CDY65885	Canola	vacuole	48.31	41.9
CDX93659	Canola	vacuole	48.03	41.81
CDX67790	Canola	vacuole	47.61	41.6
CDY59725	Canola	cytosol	18.12	41.35
CDY23785	Canola	vacuole	51.12	40.76
CDY19166	Canola	golgi, vacuole	50.42	40.43
CDY69031	Canola	cytosol, plastid, vacuole	32.58	37.36
CDY32304	Canola	cytosol	45.22	36.51
CDX75479	Canola	vacuole	42.13	35.5
CDX69103	Canola	vacuole	41.85	35.31
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	38.34	35.0
CDY40650	Canola	vacuole	40.87	34.48
CDX72512	Canola	vacuole	40.73	34.36
CDY59691	Canola	cytosol, nucleus, vacuole	16.85	34.09
CDX67763	Canola	golgi, plasma membrane, vacuole	36.38	33.59
CDX72747	Canola	vacuole	40.87	32.84
CDY53917	Canola	plastid	45.51	31.49
CDY70118	Canola	cytosol	25.7	30.81
CDY22419	Canola	cytosol	41.15	30.65
CDY02241	Canola	golgi, vacuole	41.01	29.52
CDX89744	Canola	vacuole	41.15	26.98

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078DZM1	EnsemblPlants:CDX92753	ProteinID:CDX92753	ProteinID:CDX92753.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00154575001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421
PANTHER:PTHR23421:SF63	MetaCyc:PWY-6807	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0004EE884E

Description

BnaC07g40110D

Coordinates

chrLK031873:-:664859..669437

Molecular Weight (calculated)

79778.8 Da

IEP (calculated)

6.780

GRAVY (calculated)

-0.329

Length

712 amino acids

Sequence
(BLAST)

001: MGLNFRDKAW VFLWILCCSS LVCSVKATVT YDHKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKEG GLDYYFEERY DLVKFIKLVQ QAGLYVHLRI
101: GPYVCAEWNF GGFPVWLKFV PGMAFRTDNE PFKAAMQKFT EKIVGMMKQE KLFETQGGPI ILSQIENEYG PVEWEIGAPG KAYTKWAAQM AEGLSTGVPW
201: IMCKQDEDVP DSIINTCNGF YCEGFKPKSD NKPKMWTENW TGWFPEFGGA VPYRPAEDIA FSVARFIHNG GSFMNYYMYH GGTNFDRTAG QFIATSYDYD
301: APLDEYGLPR EPKYSHLTKL HKVIKLCEPA LVSVDPTVTW LGDKLEAHVF KSESSCAAFL SNYNDSYAAK VSFWGSTYDL PPWSVSILPD CKTEYYNTAK
401: VRTPSIHMKM VPTNTKLSWG SYNEEIPYPN DNDNGTFSQD GLVEQINMTR DKTDYLWYLA DVAVSDDEKF LKTGEDPLLT IESAGHALNV FVNGQLAGTA
501: YGSLENPKLT FSQKIKLHAG VNKLALLSIA AGLPNGGVHY ETWNTGVLGP VTLTGVNSGT WDMSKWKWSY KIGTKGESLS LHTASSTVEW KEGSLVATKQ
601: PLTWYKSTFD TPAGNEPLAL DMNTMGKGQV WINGKSIGRH WPAYTVRGNC ERCSYAGTFT EKKCLSNCGE ASQRWYHVPR SWLKPSANLI VALEELGGDP
701: NGISLVVRTG KQ

Best Arabidopsis Sequence Match ( AT4G26140.1 )
(BLAST)

001: MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGTAYGSLE KPKLTFSQKI KLHAGVNKLA LLSTAAGLPN VGVHYETWNT GVLGPVTLNG VNSGTWDMTK WKWSYKIGTK GEALSVHTLA
601: GSSTVEWKEG SLVAKKQPLT WYKSTFDSPT GNEPLALDMN TMGKGQMWIN GQNIGRHWPA YTARGKCERC SYAGTFTEKK CLSNCGEASQ RWYHVPRSWL
701: KPTNNLVIVL EEWGGEPNGI SLVKRTAK

Arabidopsis Description

BGAL12beta-galactosidase 12 [Source:TAIR;Acc:AT4G26140]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.