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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • nucleus 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84445 Canola vacuole 98.82 70.0
AT5G63800.1 Thale cress vacuole 87.45 62.12
CDY39845 Canola vacuole 87.65 62.08
CDY31349 Canola vacuole 88.24 60.73
Bra024237.1-P Field mustard vacuole 56.27 57.29
KRH40964 Soybean golgi, vacuole 59.22 42.9
KRH53958 Soybean golgi, vacuole 57.65 41.0
KRH63978 Soybean golgi, vacuole 57.25 40.73
CDX76254 Canola golgi, nucleus, vacuole 43.73 37.93
CDY70594 Canola cytosol 30.78 37.74
CDY69471 Canola cytosol 30.39 37.26
CDY70118 Canola cytosol 40.78 35.02
VIT_07s0031g02590.t01 Wine grape extracellular, golgi, vacuole 31.18 34.49
HORVU3Hr1G081980.9 Barley cytosol, vacuole 50.78 34.35
GSMUA_Achr11P... Banana golgi, vacuole 53.14 33.17
Os05t0428100-00 Rice golgi, vacuole 52.35 32.92
TraesCS1D01G267600.2 Wheat endoplasmic reticulum, extracellular, vacuole 52.75 32.8
TraesCS1A01G267700.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.94 32.77
TraesCS1B01G278400.1 Wheat plastid 52.16 32.28
HORVU1Hr1G065290.7 Barley vacuole 51.96 32.24
TraesCS3A01G386100.3 Wheat vacuole 51.96 31.89
CDY69031 Canola cytosol, plastid, vacuole 38.82 31.88
Zm00001d010212_P002 Maize endoplasmic reticulum, extracellular, golgi 50.78 31.59
TraesCS3B01G418200.1 Wheat vacuole 51.57 31.57
TraesCS3D01G379100.3 Wheat vacuole 52.35 31.45
KXG22057 Sorghum vacuole 51.37 31.34
CDY59725 Canola cytosol 19.02 31.09
CDX95380 Canola vacuole 43.73 30.67
CDX94367 Canola mitochondrion 42.55 30.48
CDY11899 Canola golgi, vacuole 42.94 30.33
CDX92753 Canola golgi, vacuole 42.16 30.2
CDY42755 Canola vacuole 42.16 30.2
CDY20708 Canola golgi, vacuole 42.75 30.19
CDY32919 Canola golgi, vacuole 42.55 30.06
CDY36028 Canola plastid 40.98 29.35
CDY43757 Canola golgi, vacuole 42.55 29.28
CDX84446 Canola golgi, vacuole 42.55 29.28
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 44.31 28.97
CDY47949 Canola golgi, vacuole 41.18 28.77
CDY53959 Canola golgi, vacuole 40.98 28.63
CDX89360 Canola mitochondrion 39.22 28.61
Zm00001d042656_P001 Maize golgi, vacuole 38.63 28.06
CDX97513 Canola golgi, vacuole 45.29 27.5
CDY23637 Canola golgi, vacuole 45.1 27.41
CDY51738 Canola golgi, vacuole 44.9 27.29
CDY37486 Canola golgi, vacuole 44.31 26.94
CDX69103 Canola vacuole 44.12 26.66
CDX75479 Canola vacuole 44.12 26.63
CDY59693 Canola vacuole 44.12 26.29
CDY40650 Canola vacuole 43.33 26.18
CDX72512 Canola vacuole 43.33 26.18
CDY15749 Canola golgi, vacuole 43.14 26.07
CDX83288 Canola golgi, vacuole 42.94 25.92
CDY04567 Canola golgi, vacuole 43.14 25.88
CDX69219 Canola vacuole 41.76 25.85
CDX75569 Canola golgi, vacuole 41.76 25.76
CDY31204 Canola golgi, vacuole 42.55 25.71
CDY59691 Canola cytosol, nucleus, vacuole 17.25 25.0
CDY70160 Canola vacuole 26.47 24.77
CDX67790 Canola vacuole 38.63 24.17
CDY65885 Canola vacuole 38.82 24.12
CDX93659 Canola vacuole 38.43 23.96
CDX72747 Canola vacuole 41.37 23.81
CDY34975 Canola golgi, plasma membrane, vacuole 36.67 23.73
CDY28339 Canola vacuole 36.47 23.6
CDY23785 Canola vacuole 40.78 23.29
CDY19166 Canola golgi, vacuole 40.39 23.2
CDY02241 Canola golgi, vacuole 43.73 22.55
CDY22419 Canola cytosol 41.37 22.07
CDX88594 Canola golgi, vacuole 13.92 21.85
CDY32304 Canola cytosol 37.65 21.77
CDX89744 Canola vacuole 44.12 20.72
CDY53917 Canola plastid 36.67 18.17
CDX67763 Canola golgi, plasma membrane, vacuole 23.92 15.82
CDX98327 Canola golgi, vacuole 6.47 13.15
CDX76255 Canola extracellular 0.0 0.0
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078I1R8UniProt:A0A078I1R8EnsemblPlants:CDY43756ProteinID:CDY43756
ProteinID:CDY43756.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00077253001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_cat
InterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301PRINTS:PR00742PANTHER:PTHR23421
PANTHER:PTHR23421:SF73MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445UniParc:UPI0004EDB1D9:
Description
BnaA06g22920DBnaA06g22920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1R8]
Coordinates
chrLK032568:+:689..3414
Molecular Weight (calculated)
56597.6 Da
IEP (calculated)
9.492
GRAVY (calculated)
-0.319
Length
510 amino acids
Sequence
(BLAST)
001: MAVGLQTGVP WIMCKQPDAP DPVINTCNGM RCGETFPGPN SPNKPKMWTE DWTSFFQVYG APPYIRSAED IAYHAALFVA KNGSFINYYM YHGGTNFGRT
101: SSSYFITGYY DQAPLDEYGL LRQPKYGHLK ELHAAIKSTA NPLLHGKQTI LSLGPMQQAY VFEDARSGCV AFLVNNDGRK VIQIQFRNNA YSLRPKSIGI
201: LQNCKTLIYE TAKVNVPKNM RVTTPVHTFN VPDKWEVFRE TIPTFSGTSL RANTLLEHTK LTKDKTDYLW YTLRFKRDST CTKPSLFIES SGHVVHVFVN
301: NALAGSGHGS RDIRAVKLQV PVSLINGQNN ISILSGMVGL PDSGAYMESK SYGLTKAQIS CDGTKTIDLS RSQWGYSVGL LGEKVRLHQW RNLKRVKWSN
401: NNAGLIKNHP LAWYKTMFDA PSGDGPVGLN MESMGKGEMW VNGESIGRYW VSFLTPSGHP SQSIYHIPRA FLKPSGNLLV VLEEEGGDPL GISLNTISVV
501: GSNQSQSQLS
Best Arabidopsis Sequence Match ( AT5G63800.1 )
(BLAST)
001: MEMGRLVFGL CLILIVGTFL EFSGGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN
101: DLVKFIKEIR SQGLYVCLRI GPFIEAEWNY GGLPFWLRDV PGMVYRTDNE PFKFHMQKFT AKIVDLMKSE GLYASQGGPI ILSQIENEYA NVEGAFHEKG
201: ASYIKWAGQM AVGLKTGVPW IMCKSPDAPD PVINTCNGMK CGETFPGPNS PNKPKMWTED WTSFFQVYGK EPYIRSAEDI AFHAALFVAK NGSYINYYMY
301: HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKSSAN PLLQGKQTIL SLGPMQQAYV FEDANNGCVA FLVNNDAKAS QIQFRNNAYS
401: LSPKSIGILQ NCKNLIYETA KVNVKMNTRV TTPVQVFNVP DNWNLFRETI PAFPGTSLKT NALLEHTNLT KDKTDYLWYT SSFKLDSPCT NPSIYTESSG
501: HVVHVFVNNA LAGSGHGSRD IRVVKLQAPV SLINGQNNIS ILSGMVGLPD SGAYMERRSY GLTKVQISCG GTKPIDLSRS QWGYSVGLLG EKVRLYQWKN
601: LNRVKWSMNK AGLIKNRPLA WYKTTFDGPN GDGPVGLHMS SMGKGEIWVN GESIGRYWVS FLTPAGQPSQ SIYHIPRAFL KPSGNLLVVF EEEGGDPLGI
701: SLNTISVVGS SQAQSQFS
Arabidopsis Description
BGAL6Beta-galactosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.