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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035634.1-P Field mustard golgi, vacuole 99.86 99.86
CDY32919 Canola golgi, vacuole 97.65 97.65
CDX88594 Canola golgi, vacuole 42.24 93.85
CDY11899 Canola golgi, vacuole 89.75 89.75
AT5G56870.1 Thale cress vacuole 88.23 87.98
CDY69471 Canola cytosol 50.42 87.5
CDY70594 Canola cytosol 49.86 86.54
CDX76255 Canola extracellular 14.96 84.38
CDX94367 Canola mitochondrion 76.59 77.67
CDX92753 Canola golgi, vacuole 76.04 77.11
CDY42755 Canola vacuole 75.76 76.83
CDX95380 Canola vacuole 75.48 74.97
CDX89360 Canola mitochondrion 71.88 74.25
CDX76254 Canola golgi, nucleus, vacuole 59.7 73.3
KRH37385 Soybean nucleus 66.9 66.99
KRH12385 Soybean vacuole 66.48 66.57
PGSC0003DMT400000899 Potato nucleus, peroxisome, vacuole 61.5 66.27
Solyc12g008840.1.1 Tomato extracellular 65.65 65.47
GSMUA_Achr7P08970_001 Banana vacuole 64.54 63.84
GSMUA_Achr6P00880_001 Banana golgi, vacuole 64.68 63.62
GSMUA_Achr7P08960_001 Banana endoplasmic reticulum, golgi, vacuole 64.4 63.18
GSMUA_Achr7P08950_001 Banana golgi, vacuole 64.13 62.91
GSMUA_Achr7P08940_001 Banana vacuole 63.16 62.3
Os06t0573600-01 Rice plasma membrane, vacuole 60.66 61.26
TraesCS7B01G264200.1 Wheat plasma membrane, vacuole 60.66 61.0
Zm00001d046357_P001 Maize extracellular 60.94 60.94
EER88554 Sorghum golgi, vacuole 60.94 60.69
TraesCS7D01G359500.1 Wheat golgi 60.25 60.67
TraesCS6A01G185400.1 Wheat golgi, vacuole 60.8 60.64
TraesCS6B01G214100.1 Wheat golgi, vacuole 60.66 60.41
TraesCS7A01G363600.1 Wheat plasma membrane, vacuole 59.97 60.31
CDX98327 Canola golgi, vacuole 20.91 60.16
TraesCS6D01G172400.1 Wheat golgi, vacuole 60.39 60.14
CDY36028 Canola plastid 58.45 59.27
CDY53959 Canola golgi, vacuole 59.56 58.9
HORVU7Hr1G086690.2 Barley plasma membrane, vacuole 60.8 58.77
CDY47949 Canola golgi, vacuole 59.28 58.63
EES06516 Sorghum mitochondrion, plastid 59.56 58.11
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 67.31 57.93
KRH02714 Soybean golgi, vacuole 66.9 57.57
HORVU6Hr1G039490.6 Barley plastid 60.8 57.46
Os02t0219200-01 Rice peroxisome, vacuole 39.2 56.6
VIT_11s0016g02200.t01 Wine grape vacuole 65.37 56.46
CDY23637 Canola golgi, vacuole 64.96 55.9
CDX97513 Canola golgi, vacuole 64.96 55.83
GSMUA_Achr2P16780_001 Banana plastid 64.96 55.77
CDY51738 Canola golgi, vacuole 63.99 55.07
Os01t0580200-01 Rice golgi, vacuole 62.88 54.9
OQU87043 Sorghum golgi, vacuole 62.74 54.78
CDY37486 Canola golgi, vacuole 63.57 54.71
Zm00001d044290_P005 Maize golgi, vacuole 62.88 54.7
GSMUA_Achr6P35850_001 Banana golgi, vacuole 61.91 54.25
HORVU3Hr1G050450.12 Barley golgi, vacuole 62.05 53.91
TraesCS3A01G208600.1 Wheat plastid 62.33 53.89
TraesCS3D01G211500.2 Wheat golgi, vacuole 62.19 53.77
TraesCS3B01G235100.1 Wheat golgi, vacuole 62.05 53.52
Zm00001d053585_P002 Maize plastid 59.56 51.87
CDY43757 Canola golgi, vacuole 51.8 50.47
CDX84446 Canola golgi, vacuole 51.66 50.34
CDX75569 Canola golgi, vacuole 57.62 50.3
CDX69219 Canola vacuole 57.06 50.0
CDY59693 Canola vacuole 58.45 49.3
CDY70160 Canola vacuole 36.7 48.62
CDY39845 Canola vacuole 46.68 46.81
CDY15749 Canola golgi, vacuole 53.19 45.5
CDY31204 Canola golgi, vacuole 53.19 45.5
CDY31349 Canola vacuole 46.68 45.48
CDX84445 Canola vacuole 45.15 45.28
CDX83288 Canola golgi, vacuole 52.49 44.85
CDY04567 Canola golgi, vacuole 52.77 44.82
PGSC0003DMT400011458 Potato cytosol, nucleus, peroxisome 27.01 43.62
CDY43756 Canola cytosol, nucleus, peroxisome 30.19 42.75
CDY65885 Canola vacuole 48.34 42.51
CDX67790 Canola vacuole 47.78 42.33
CDX93659 Canola vacuole 47.92 42.3
CDY28339 Canola vacuole 45.98 42.13
CDY34975 Canola golgi, plasma membrane, vacuole 45.98 42.13
CDY23785 Canola vacuole 50.69 40.99
CDY19166 Canola golgi, vacuole 50.28 40.88
CDY59725 Canola cytosol 17.59 40.71
CDY32304 Canola cytosol 45.57 37.3
CDX75479 Canola vacuole 43.35 37.04
CDY69031 Canola cytosol, plastid, vacuole 31.72 36.88
CDX69103 Canola vacuole 43.07 36.85
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 39.75 36.79
CDY40650 Canola vacuole 42.11 36.02
CDX72512 Canola vacuole 41.97 35.9
CDX72747 Canola vacuole 41.69 33.97
CDY59691 Canola cytosol, nucleus, vacuole 16.34 33.52
CDX67763 Canola golgi, plasma membrane, vacuole 35.6 33.33
CDY70118 Canola cytosol 26.18 31.82
CDY53917 Canola plastid 45.01 31.58
CDY22419 Canola cytosol 41.55 31.38
CDY02241 Canola golgi, vacuole 42.66 31.14
CDX89744 Canola vacuole 42.66 28.36
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078G7U2UniProt:A0A078G7U2EnsemblPlants:CDY20708ProteinID:CDY20708
ProteinID:CDY20708.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00012909001InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301
PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF63MetaCyc:PWY-6807SUPFAM:SSF49785
SUPFAM:SSF51445TMHMM:TMhelixUniParc:UPI0004EEB853:::
Description
BnaA02g08480DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078G7U2]
Coordinates
chrLK032111:-:155057..159689
Molecular Weight (calculated)
80947.6 Da
IEP (calculated)
9.070
GRAVY (calculated)
-0.233
Length
722 amino acids
Sequence
(BLAST)
001: MGLNVRDKVS IFLAILCYSS LICSVKATVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGN YYFGDRYDLV
101: KFIKLVQQAG LYVNLRIGPF VCAEWNFGGF PVWLKFVPGI AFRTDNEPFK AAMKKFTEKI VWMMKAERLF QTQGGPIILA QIENEYGPVE WNSGAPAKAY
201: TQWAAQMALG LQTGVPWIMC KQEDAPSPII DTCNGYYCED FKPNSINKPK MWTENWTGWY TEFGGAVPYR PVEDIAYSVA RFILKGGSFV NYYMYHGGTN
301: FDRTAGEYMA SSYDYDAPLD EYGLPREPKY SHLKALHKVI KLSEPALVSA DATVTYLGAK QEAHVFWSKS SCAAFLSNND VNSPARVMFR GFPYDLPPWS
401: VSILPDCKTE YYNTAKVNAP SAHRNMVSTG TRFSWESFNE VVPFANEAGT FPRNGLVEQI SMTWDKSDYF WYLTDITVGA GERFLKTGDF PLLTAWSAGH
501: ALHVFVNGQF AGRAYGSLEH TSLTFSQKIK LHAGVNKLAL LSVVVGLPNV GKHFETWNKG ILGGVTLKGV NSGTWDMSKW KWSYKVGMKG EALSLHTPTA
601: SVRWNQGSFL AKNQPLTWYK SIFAAPPGNE PLAVDMNTMG KGQVWINGRN IGRHWAAYKA RGNCGRCNYA GEFTATKCLS NCGEASQRWY HVPRSWLKPQ
701: NVIVVFEEWG GDTSGISLVK RI
Best Arabidopsis Sequence Match ( AT5G56870.1 )
(BLAST)
001: MVLNFRDKSC IFLAILCCLS LSCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPGPII DTCNGYYCED FKPNSINKPK MWTENWTGWY TDFGGAVPYR PVEDIAYSVA RFIQKGGSLV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKAI KLSEPALLSA DATVTSLGAK QEAYVFWSKS SCAAFLSNKD ENSAARVLFR GFPYDLPPWS
401: VSILPDCKTE VYNTAKVNAP SVHRNMVPTG TKFSWGSFNE ATPTANEAGT FARNGLVEQI SMTWDKSDYF WYITDITIGS GETFLKTGDS PLLTVMSAGH
501: ALHVFVNGQL SGTAYGGLDH PKLTFSQKIK LHAGVNKIAL LSVAVGLPNV GTHFEQWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EALSLHTNTE
601: SSGVRWTQGS FVAKKQPLTW YKSTFATPAG NEPLALDMNT MGKGQVWING RNIGRHWPAY KAQGSCGRCN YAGTFDAKKC LSNCGEASQR WYHVPRSWLK
701: SQNLIVVFEE LGGDPNGISL VKRT
Arabidopsis Description
BGAL4Beta-galactosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.