Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 88.6 | 61.1 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 88.4 | 61.05 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 88.0 | 60.69 |
| EES06516 | Sorghum | mitochondrion, plastid | 88.2 | 59.59 |
| HORVU6Hr1G039490.6 | Barley | plastid | 88.8 | 58.12 |
| CDY70594 | Canola | cytosol | 46.2 | 55.53 |
| CDY69471 | Canola | cytosol | 46.0 | 55.29 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 77.2 | 53.99 |
| Zm00001d053585_P002 | Maize | plastid | 86.4 | 52.11 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 61.2 | 52.04 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 71.6 | 49.04 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 71.6 | 48.77 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 70.6 | 47.96 |
| PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 63.6 | 47.46 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 69.0 | 46.88 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 68.4 | 46.72 |
| Solyc12g008840.1.1 | Tomato | extracellular | 64.4 | 44.48 |
| KRH37385 | Soybean | nucleus | 64.0 | 44.38 |
| PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 39.2 | 43.85 |
| KRH12385 | Soybean | vacuole | 63.2 | 43.83 |
| Bra019644.1-P | Field mustard | golgi, plastid, vacuole | 61.0 | 42.84 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 72.0 | 42.81 |
| CDX94367 | Canola | mitochondrion | 60.6 | 42.56 |
| CDX89360 | Canola | mitochondrion | 59.2 | 42.35 |
| CDX95380 | Canola | vacuole | 61.4 | 42.23 |
| AT5G56870.1 | Thale cress | vacuole | 61.0 | 42.13 |
| Bra013956.1-P | Field mustard | cytosol, mitochondrion, plastid, vacuole | 60.8 | 41.53 |
| CDX92753 | Canola | golgi, vacuole | 58.8 | 41.29 |
| CDY42755 | Canola | vacuole | 58.6 | 41.15 |
| Bra019120.1-P | Field mustard | golgi, vacuole | 58.4 | 41.01 |
| CDY11899 | Canola | golgi, vacuole | 59.2 | 41.0 |
| Bra006850.1-P | Field mustard | golgi, vacuole | 59.0 | 40.86 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 68.4 | 40.67 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 67.4 | 40.17 |
| CDY23637 | Canola | golgi, vacuole | 67.4 | 40.17 |
| CDX97513 | Canola | golgi, vacuole | 67.4 | 40.12 |
| KRH10007 | Soybean | nucleus | 67.2 | 40.0 |
| KRH23324 | Soybean | vacuole | 67.0 | 39.83 |
| Os01t0580200-01 | Rice | golgi, vacuole | 65.4 | 39.54 |
| CDY32919 | Canola | golgi, vacuole | 57.0 | 39.47 |
| CDY37486 | Canola | golgi, vacuole | 66.2 | 39.45 |
| AT4G26140.7 | Thale cress | vacuole | 59.4 | 39.44 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 66.8 | 39.43 |
| Bra035634.1-P | Field mustard | golgi, vacuole | 56.8 | 39.34 |
| CDY51738 | Canola | golgi, vacuole | 66.0 | 39.33 |
| Solyc06g062580.2.1 | Tomato | nucleus | 66.0 | 39.24 |
| CDY20708 | Canola | golgi, vacuole | 56.6 | 39.2 |
| KRH44153 | Soybean | nucleus | 66.0 | 39.15 |
| KRH47126 | Soybean | nucleus | 66.0 | 39.05 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 65.4 | 38.93 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 60.6 | 38.8 |
| Bra021506.1-P | Field mustard | vacuole | 66.2 | 38.44 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 64.2 | 38.44 |
| PGSC0003DMT400083896 | Potato | extracellular | 64.2 | 38.44 |
| Solyc03g121540.2.1 | Tomato | nucleus | 64.2 | 38.31 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 64.2 | 38.31 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 63.4 | 37.78 |
| VIT_11s0016g02200.t01 | Wine grape | vacuole | 63.0 | 37.68 |
| KRH02714 | Soybean | golgi, vacuole | 63.0 | 37.54 |
| Os03t0165400-01 | Rice | vacuole | 58.6 | 34.84 |
| Os03t0255100-01 | Rice | extracellular | 52.2 | 27.3 |
| Os12t0429200-01 | Rice | plasma membrane | 48.8 | 26.55 |
| Os10t0330600-01 | Rice | extracellular | 43.4 | 26.21 |
| Os10t0340600-01 | Rice | extracellular, golgi, vacuole | 43.2 | 26.09 |
| Os01t0875500-01 | Rice | endoplasmic reticulum, mitochondrion, nucleus, vacuole | 47.6 | 25.9 |
| Os05t0428100-00 | Rice | golgi, vacuole | 41.2 | 25.4 |
| Os08t0549200-01 | Rice | plasma membrane | 41.4 | 24.41 |
| CDX88594 | Canola | golgi, vacuole | 15.6 | 24.0 |
| Os09t0539200-01 | Rice | vacuole | 18.4 | 20.63 |
| Os06t0628500-00 | Rice | extracellular, golgi, vacuole | 7.4 | 12.59 |
| CDX76255 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:3.20.20.80 | MapMan:35.1 | UniProt:A0A0P0VGJ1 | ProteinID:BAS77685.1 | ProteinID:BAS77686.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 |
| EnsemblPlantsGene:Os02g0219200 | EnsemblPlants:Os02t0219200-01 | PFAM:PF01301 | PRINTS:PR00742 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF70 |
| SUPFAM:SSF49785 | SUPFAM:SSF51445 | UniParc:UPI0000DF05FE | SEG:seg | : | : |
Description
BETA-GALACTOSIDASE 7Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta- galactosidase) (Exo-(1-->4)-beta-D-galactanase). (Os02t0219200-01);Similar to Beta-galactosidase. (Os02t0219200-02);Similar to Beta-galactosidase. (Os02t0219200-03)
Coordinates
chr2:-:6656266..6659388
Molecular Weight (calculated)
55008.5 Da
IEP (calculated)
8.182
GRAVY (calculated)
-0.390
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: KQDDAPDPVI NTCNGFYCDY FSPNKNYKPS MWTEAWTGWF TSFGGGVPHR PVEDLAFAVA RFIQKGGSFV NYYMYHGGTN FGRTAGGPFI ATSYDYDAPI
101: DEFGLLRQPK WGHLRDLHRA IKQAEPVLVS ADPTIESIGS YEKAYVFKAK NGACAAFLSN YHMNTAVKVR FNGQQYNLPA WSISILPDCK TAVFNTATVK
201: EPTLMPKMNP VVRFAWQSYS EDTNSLSDSA FTKDGLVEQL SMTWDKSDYL WYTTYVNIGT NDLRSGQSPQ LTVYSAGHSM QVFVNGKSYG SVYGGYDNPK
301: LTYNGRVKMW QGSNKISILS SAVGLPNVGN HFENWNVGVL GPVTLSSLNG GTKDLSHQKW TYQVGLKGET LGLHTVTGSS AVEWGGPGGY QPLTWHKAFF
401: NAPAGNDPVA LDMGSMGKGQ LWVNGHHVGR YWSYKASGGC GGCSYAGTYH EDKCRSNCGD LSQRWYHVPR SWLKPGGNLL VVLEEYGGDL AGVSLATRTT
101: DEFGLLRQPK WGHLRDLHRA IKQAEPVLVS ADPTIESIGS YEKAYVFKAK NGACAAFLSN YHMNTAVKVR FNGQQYNLPA WSISILPDCK TAVFNTATVK
201: EPTLMPKMNP VVRFAWQSYS EDTNSLSDSA FTKDGLVEQL SMTWDKSDYL WYTTYVNIGT NDLRSGQSPQ LTVYSAGHSM QVFVNGKSYG SVYGGYDNPK
301: LTYNGRVKMW QGSNKISILS SAVGLPNVGN HFENWNVGVL GPVTLSSLNG GTKDLSHQKW TYQVGLKGET LGLHTVTGSS AVEWGGPGGY QPLTWHKAFF
401: NAPAGNDPVA LDMGSMGKGQ LWVNGHHVGR YWSYKASGGC GGCSYAGTYH EDKCRSNCGD LSQRWYHVPR SWLKPGGNLL VVLEEYGGDL AGVSLATRTT
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.