Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10007 | Soybean | nucleus | 97.5 | 97.62 |
| KRH47126 | Soybean | nucleus | 87.04 | 86.63 |
| KRH44153 | Soybean | nucleus | 86.44 | 86.24 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 80.14 | 80.14 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 78.83 | 79.02 |
| CDX97513 | Canola | golgi, vacuole | 78.83 | 78.93 |
| PGSC0003DMT400083896 | Potato | extracellular | 78.12 | 78.68 |
| CDY23637 | Canola | golgi, vacuole | 78.48 | 78.67 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 79.19 | 78.63 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 77.76 | 78.32 |
| Solyc03g121540.2.1 | Tomato | nucleus | 78.0 | 78.28 |
| CDY51738 | Canola | golgi, vacuole | 78.0 | 78.19 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 77.88 | 78.16 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 77.41 | 77.5 |
| CDY37486 | Canola | golgi, vacuole | 77.17 | 77.35 |
| Solyc06g062580.2.1 | Tomato | nucleus | 77.05 | 77.05 |
| Bra021506.1-P | Field mustard | vacuole | 77.88 | 76.07 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 63.26 | 72.88 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 63.02 | 72.21 |
| KRH12385 | Soybean | vacuole | 61.24 | 71.43 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 71.11 | 71.28 |
| KRH37385 | Soybean | nucleus | 61.0 | 71.15 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 62.19 | 71.06 |
| KRH02714 | Soybean | golgi, vacuole | 70.75 | 70.92 |
| GSMUA_Achr6P35850_001 | Banana | golgi, vacuole | 69.44 | 70.87 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 61.95 | 70.79 |
| Os01t0580200-01 | Rice | golgi, vacuole | 69.08 | 70.25 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 61.12 | 70.22 |
| OQU87043 | Sorghum | golgi, vacuole | 68.73 | 69.89 |
| Zm00001d044290_P005 | Maize | golgi, vacuole | 68.49 | 69.4 |
| HORVU3Hr1G050450.12 | Barley | golgi, vacuole | 68.49 | 69.31 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 68.61 | 69.1 |
| TraesCS3A01G208600.1 | Wheat | plastid | 68.49 | 68.98 |
| TraesCS3B01G235100.1 | Wheat | golgi, vacuole | 68.61 | 68.94 |
| TraesCS7B01G264200.1 | Wheat | plasma membrane, vacuole | 57.31 | 67.13 |
| EER88554 | Sorghum | golgi, vacuole | 57.79 | 67.03 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 39.83 | 67.0 |
| Os06t0573600-01 | Rice | plasma membrane, vacuole | 56.96 | 66.99 |
| TraesCS7A01G363600.1 | Wheat | plasma membrane, vacuole | 57.19 | 66.99 |
| TraesCS7D01G359500.1 | Wheat | golgi | 57.07 | 66.95 |
| Zm00001d046357_P001 | Maize | extracellular | 57.07 | 66.48 |
| TraesCS6A01G185400.1 | Wheat | golgi, vacuole | 57.19 | 66.44 |
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 56.84 | 65.93 |
| KRH15132 | Soybean | mitochondrion, nucleus | 57.07 | 65.57 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 56.36 | 65.38 |
| KRH76716 | Soybean | nucleus | 65.87 | 65.25 |
| KRH28740 | Soybean | nucleus | 65.99 | 65.06 |
| KRH05876 | Soybean | nucleus | 56.48 | 64.89 |
| EES06516 | Sorghum | mitochondrion, plastid | 57.07 | 64.86 |
| HORVU7Hr1G086690.2 | Barley | plasma membrane, vacuole | 57.07 | 64.26 |
| KRH61101 | Soybean | nucleus | 56.12 | 64.13 |
| KRH08131 | Soybean | nucleus | 64.33 | 63.8 |
| KRH69834 | Soybean | extracellular, golgi | 63.97 | 63.44 |
| HORVU6Hr1G039490.6 | Barley | plastid | 57.31 | 63.09 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 61.71 | 61.71 |
| KRH51779 | Soybean | vacuole | 50.89 | 60.03 |
| Zm00001d053585_P002 | Maize | plastid | 56.36 | 57.18 |
| KRH22910 | Soybean | nucleus | 56.48 | 56.55 |
| KRH26431 | Soybean | golgi, vacuole | 55.53 | 55.6 |
| KRG89008 | Soybean | nucleus | 54.7 | 55.02 |
| KRH29942 | Soybean | extracellular, golgi, vacuole | 54.58 | 54.77 |
| KRH63980 | Soybean | vacuole | 52.44 | 52.31 |
| KRH53957 | Soybean | nucleus | 51.96 | 51.72 |
| KRH64633 | Soybean | vacuole | 41.14 | 49.71 |
| KRH40964 | Soybean | golgi, vacuole | 41.38 | 49.43 |
| KRH53267 | Soybean | golgi, vacuole | 40.9 | 49.35 |
| KRH70131 | Soybean | vacuole | 48.51 | 48.86 |
| KRH53958 | Soybean | golgi, vacuole | 41.62 | 48.81 |
| KRH63978 | Soybean | golgi, vacuole | 41.62 | 48.81 |
| KRH19351 | Soybean | extracellular, golgi, vacuole | 47.8 | 48.61 |
| KRH38264 | Soybean | endoplasmic reticulum, golgi, vacuole | 48.04 | 48.56 |
| KRH02579 | Soybean | extracellular, golgi, vacuole | 48.28 | 48.1 |
| KRH42784 | Soybean | nucleus | 51.49 | 47.63 |
| KRH07365 | Soybean | extracellular, golgi, vacuole | 46.49 | 47.34 |
| KRH48708 | Soybean | vacuole | 46.85 | 46.57 |
| KRH48710 | Soybean | vacuole | 46.73 | 46.45 |
| KRH60700 | Soybean | extracellular, golgi, vacuole | 44.35 | 44.19 |
| KRH38266 | Soybean | cytosol, peroxisome | 30.08 | 43.25 |
| KRH06832 | Soybean | mitochondrion | 38.53 | 43.2 |
| KRH24309 | Soybean | golgi, vacuole | 43.04 | 42.94 |
| KRH29286 | Soybean | extracellular, golgi, vacuole | 42.57 | 42.52 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | EntrezGene:100787084 |
| Gene3D:2.60.120.260 | Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EMBL:ACUP02008461 | EnsemblPlantsGene:GLYMA_13G350700 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | UniProt:I1M5C9 |
| InterPro:IPR000922 | InterPro:IPR008979 | EnsemblPlants:KRH23324 | ProteinID:KRH23324 | ProteinID:KRH23324.1 | InterPro:Lectin_gal-bd_dom |
| PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
| PANTHER:PTHR23421:SF74 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI000233B24D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:44006167..44012783
Molecular Weight (calculated)
93311.2 Da
IEP (calculated)
7.340
GRAVY (calculated)
-0.237
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMCLKLKLI MWNVALLLAF SLIGSAKASV SYDSKAITIN GQRRILISGS IHYPRSTPEM WPDLIQKAKD GGLDVIQTYV FWNGHEPSPG KYYFEGNYDL
101: VKFIKLVQQA GLYVHLRIGP YVCAEWNFGG FPVWLKYIPG ISFRTDNEPF KVQMQKFTTK IVDLMKAERL YESQGGPIIM SQIENEYGPM EYEIGAAGKA
201: YTKWAAEMAM ELGTGVPWIM CKQDDTPDPL INTCNGFYCD YFSPNKAYKP KMWTEAWTGW FTEFGGPVPH RPAEDLAFSV ARFIQKGGSF INYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP LDEYGLLRQP KWGHLKDLHR AIKLCEPALV SGDPTVTKIG NYQEAHVFKS MSGACAAFLA NYNPKSYATV AFGNMHYNLP
401: PWSISILPNC KNTVYNTARV GSQSAQMKMT RVPIHGGLSW LSFNEETTTT DDSSFTMTGL LEQLNTTRDL SDYLWYSTDV VLDPNEGFLR NGKDPVLTVF
501: SAGHALHVFI NGQLSGTAYG SLEFPKLTFN EGVKLRTGVN KISLLSVAVG LPNVGPHFET WNAGVLGPIS LSGLNEGRRD LSWQKWSYKV GLKGETLSLH
601: SLGGSSSVEW IQGSLVSQRQ PLTWYKTTFD APDGTAPLAL DMNSMGKGQV WLNGQNLGRY WPAYKASGTC DYCDYAGTYN ENKCRSNCGE ASQRWYHVPQ
701: SWLKPTGNLL VVFEELGGDL NGISLVRRDI DSVCADIYEW QPNLISYQMQ TSGKAPVRPK VHLSCSPGQK ISSIKFASFG TPVGSCGNFH EGSCHAHMSY
801: DAFERNCVGQ NLCTVAVSPE NFGGDPCPNV LKKLSVEAIC S
101: VKFIKLVQQA GLYVHLRIGP YVCAEWNFGG FPVWLKYIPG ISFRTDNEPF KVQMQKFTTK IVDLMKAERL YESQGGPIIM SQIENEYGPM EYEIGAAGKA
201: YTKWAAEMAM ELGTGVPWIM CKQDDTPDPL INTCNGFYCD YFSPNKAYKP KMWTEAWTGW FTEFGGPVPH RPAEDLAFSV ARFIQKGGSF INYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP LDEYGLLRQP KWGHLKDLHR AIKLCEPALV SGDPTVTKIG NYQEAHVFKS MSGACAAFLA NYNPKSYATV AFGNMHYNLP
401: PWSISILPNC KNTVYNTARV GSQSAQMKMT RVPIHGGLSW LSFNEETTTT DDSSFTMTGL LEQLNTTRDL SDYLWYSTDV VLDPNEGFLR NGKDPVLTVF
501: SAGHALHVFI NGQLSGTAYG SLEFPKLTFN EGVKLRTGVN KISLLSVAVG LPNVGPHFET WNAGVLGPIS LSGLNEGRRD LSWQKWSYKV GLKGETLSLH
601: SLGGSSSVEW IQGSLVSQRQ PLTWYKTTFD APDGTAPLAL DMNSMGKGQV WLNGQNLGRY WPAYKASGTC DYCDYAGTYN ENKCRSNCGE ASQRWYHVPQ
701: SWLKPTGNLL VVFEELGGDL NGISLVRRDI DSVCADIYEW QPNLISYQMQ TSGKAPVRPK VHLSCSPGQK ISSIKFASFG TPVGSCGNFH EGSCHAHMSY
801: DAFERNCVGQ NLCTVAVSPE NFGGDPCPNV LKKLSVEAIC S
001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
Arabidopsis Description
BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.