Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36360.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT4G36360.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76716 | Soybean | nucleus | 96.6 | 97.06 |
| KRH08131 | Soybean | nucleus | 86.17 | 86.67 |
| KRH69834 | Soybean | extracellular, golgi | 85.81 | 86.32 |
| VIT_04s0023g02690.t01 | Wine grape | extracellular, golgi | 81.13 | 81.89 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 79.02 | 78.74 |
| PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 77.49 | 78.22 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 77.26 | 77.99 |
| CDX69219 | Canola | vacuole | 75.26 | 77.91 |
| Bra011677.1-P | Field mustard | golgi, vacuole | 78.08 | 77.8 |
| CDX75569 | Canola | golgi, vacuole | 75.26 | 77.63 |
| CDY59693 | Canola | vacuole | 77.73 | 77.45 |
| KRH15132 | Soybean | mitochondrion, nucleus | 63.66 | 74.18 |
| KRH05876 | Soybean | nucleus | 63.07 | 73.5 |
| KRH61101 | Soybean | nucleus | 63.31 | 73.37 |
| GSMUA_Achr4P06620_001 | Banana | cytosol | 55.33 | 73.29 |
| GSMUA_Achr4P13580_001 | Banana | golgi, vacuole | 73.74 | 72.47 |
| GSMUA_Achr9P21610_001 | Banana | extracellular, golgi | 72.45 | 72.45 |
| CDY59691 | Canola | cytosol, nucleus, vacuole | 29.78 | 72.16 |
| EER92805 | Sorghum | vacuole | 70.93 | 71.85 |
| Os03t0165400-01 | Rice | vacuole | 70.22 | 71.22 |
| CDY59725 | Canola | cytosol | 25.91 | 70.83 |
| TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 69.64 | 70.3 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 69.52 | 70.26 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 69.75 | 70.17 |
| HORVU4Hr1G074280.4 | Barley | vacuole | 69.17 | 69.66 |
| KRH51779 | Soybean | vacuole | 58.15 | 69.57 |
| Zm00001d048440_P003 | Maize | vacuole | 70.34 | 69.04 |
| KRH10007 | Soybean | nucleus | 65.42 | 66.43 |
| Bra017756.1-P | Field mustard | cytosol, nucleus, vacuole | 23.56 | 66.12 |
| KRH23324 | Soybean | vacuole | 65.06 | 65.99 |
| Zm00001d027803_P002 | Maize | golgi, plasma membrane, vacuole | 70.81 | 65.8 |
| KRH44153 | Soybean | nucleus | 64.01 | 64.77 |
| KRH47126 | Soybean | nucleus | 63.89 | 64.5 |
| KRH37385 | Soybean | nucleus | 52.99 | 62.69 |
| KRH12385 | Soybean | vacuole | 52.76 | 62.41 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 59.55 | 60.55 |
| KRH02714 | Soybean | golgi, vacuole | 59.09 | 60.07 |
| KRH22910 | Soybean | nucleus | 55.1 | 55.95 |
| KRH26431 | Soybean | golgi, vacuole | 54.16 | 55.0 |
| KRH29942 | Soybean | extracellular, golgi, vacuole | 53.46 | 54.42 |
| KRG89008 | Soybean | nucleus | 52.99 | 54.07 |
| KRH63980 | Soybean | vacuole | 51.58 | 52.19 |
| KRH53957 | Soybean | nucleus | 51.0 | 51.48 |
| KRH40964 | Soybean | golgi, vacuole | 41.85 | 50.71 |
| KRH64633 | Soybean | vacuole | 40.21 | 49.28 |
| KRH63978 | Soybean | golgi, vacuole | 41.15 | 48.95 |
| KRH53267 | Soybean | golgi, vacuole | 39.98 | 48.92 |
| KRH53958 | Soybean | golgi, vacuole | 41.03 | 48.81 |
| KRH19351 | Soybean | extracellular, golgi, vacuole | 46.31 | 47.76 |
| KRH38264 | Soybean | endoplasmic reticulum, golgi, vacuole | 46.54 | 47.72 |
| KRH02579 | Soybean | extracellular, golgi, vacuole | 46.31 | 46.8 |
| KRH07365 | Soybean | extracellular, golgi, vacuole | 45.02 | 46.49 |
| KRH70131 | Soybean | vacuole | 45.49 | 46.47 |
| KRH42784 | Soybean | nucleus | 49.24 | 46.2 |
| KRH48708 | Soybean | vacuole | 45.13 | 45.51 |
| KRH48710 | Soybean | vacuole | 45.02 | 45.39 |
| KRH06832 | Soybean | mitochondrion | 38.1 | 43.33 |
| KRH60700 | Soybean | extracellular, golgi, vacuole | 42.2 | 42.65 |
| KRH38266 | Soybean | cytosol, peroxisome | 29.07 | 42.39 |
| KRH24309 | Soybean | golgi, vacuole | 41.74 | 42.23 |
| KRH29286 | Soybean | extracellular, golgi, vacuole | 41.62 | 42.16 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | EntrezGene:100798501 |
| Gene3D:2.60.120.260 | Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | EMBL:ACUP02006762 | EnsemblPlantsGene:GLYMA_11G073100 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030312 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | UniProt:I1LHX5 |
| InterPro:IPR000922 | InterPro:IPR008979 | EnsemblPlants:KRH28740 | ProteinID:KRH28740 | ProteinID:KRH28740.1 | InterPro:Lectin_gal-bd_dom |
| PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
| PANTHER:PTHR23421:SF79 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI000233D2C3 |
Description
hypothetical protein
Coordinates
chr11:-:5452404..5458366
Molecular Weight (calculated)
95098.0 Da
IEP (calculated)
7.825
GRAVY (calculated)
-0.295
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: METTLVSKMQ FAAFFCLALW LGFQLEQVHC SVTYDRKAIL INGQRRILFS GSIHYPRSTP DMWEDLIYKA KEGGLDVIET YIFWNVHEPS RGNYNFEGRY
101: DLVRFVKTIQ KAGLYAHLRI GPYVCAEWNF GGFPVWLKYV PGISFRTDNE PFKKAMQGFT EKIVGMMKSE RLYESQGGPI ILSQIENEYG AQSKLLGPAG
201: QNYVNWAAKM AVETGTGVPW VMCKEDDAPD PVINTCNGFY CDYFTPNKPY KPSIWTEAWS GWFSEFGGPN HERPVQDLAF GVARFIQKGG SFVNYYMYHG
301: GTNFGRTAGG PFITTSYDYD APLDEYGLIR QPKYGHLKEL HKAIKMCERA LVSADPAVTS MGNFQQAHVY TTKSGDCAAF LSNFDTKSSV RVMFNNMHYN
401: LPPWSISILP DCRNVVFNTA KVGVQTSQMQ MLPTNTHMFS WESFDEDISS LDDGSAITIT TSGLLEQINV TRDTSDYLWY ITSVDIGSSE SFLRGGKLPT
501: LIVQSTGHAV HVFINGQLSG SAYGTREDRR FRYTGTVNLR AGTNRIALLS VAVGLPNVGG HFETWNTGIL GPVVLRGLNQ GKLDLSWQKW TYQVGLKGEA
601: MNLASPNGIS SVEWMQSALV SEKNQPLTWH KTYFDAPDGD EPLALDMEGM GKGQIWINGL SIGRYWTAPA AGICNGCSYA GTFRPPKCQV GCGQPTQRWY
701: HVPRSWLKPN HNLLVVFEEL GGDPSKISLV KRSVSSICAD VSEYHPNIRN WHIDSYGKSE EFHPPKVHLH CSPSQAISSI KFASFGTPLG TCGNYEKGVC
801: HSPTSYATLE KKCIGKPRCT VTVSNSNFGQ DPCPNVLKRL SVEAVCSPTN RRG
101: DLVRFVKTIQ KAGLYAHLRI GPYVCAEWNF GGFPVWLKYV PGISFRTDNE PFKKAMQGFT EKIVGMMKSE RLYESQGGPI ILSQIENEYG AQSKLLGPAG
201: QNYVNWAAKM AVETGTGVPW VMCKEDDAPD PVINTCNGFY CDYFTPNKPY KPSIWTEAWS GWFSEFGGPN HERPVQDLAF GVARFIQKGG SFVNYYMYHG
301: GTNFGRTAGG PFITTSYDYD APLDEYGLIR QPKYGHLKEL HKAIKMCERA LVSADPAVTS MGNFQQAHVY TTKSGDCAAF LSNFDTKSSV RVMFNNMHYN
401: LPPWSISILP DCRNVVFNTA KVGVQTSQMQ MLPTNTHMFS WESFDEDISS LDDGSAITIT TSGLLEQINV TRDTSDYLWY ITSVDIGSSE SFLRGGKLPT
501: LIVQSTGHAV HVFINGQLSG SAYGTREDRR FRYTGTVNLR AGTNRIALLS VAVGLPNVGG HFETWNTGIL GPVVLRGLNQ GKLDLSWQKW TYQVGLKGEA
601: MNLASPNGIS SVEWMQSALV SEKNQPLTWH KTYFDAPDGD EPLALDMEGM GKGQIWINGL SIGRYWTAPA AGICNGCSYA GTFRPPKCQV GCGQPTQRWY
701: HVPRSWLKPN HNLLVVFEEL GGDPSKISLV KRSVSSICAD VSEYHPNIRN WHIDSYGKSE EFHPPKVHLH CSPSQAISSI KFASFGTPLG TCGNYEKGVC
801: HSPTSYATLE KKCIGKPRCT VTVSNSNFGQ DPCPNVLKRL SVEAVCSPTN RRG
001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
Arabidopsis Description
BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.