Factsheet for Bra017756.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, vacuole

Predictor Summary:

nucleus 2
golgi 1
vacuole 1
extracellular 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36360.1	Bra024839.1-P	AT2G01950.1	19000166
AT4G36360.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59725	Canola	cytosol	58.55	57.05
Bra011677.1-P	Field mustard	golgi, vacuole	80.26	28.5
AT4G36360.1	Thale cress	endoplasmic reticulum, golgi, vacuole	77.3	27.45
GSMUA_Achr4P06620_001	Banana	cytosol	55.26	26.09
KRH08131	Soybean	nucleus	67.43	24.17
KRH69834	Soybean	extracellular, golgi	66.45	23.82
KRH76716	Soybean	nucleus	66.45	23.79
KRH28740	Soybean	nucleus	66.12	23.56
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	64.8	23.31
PGSC0003DMT400009096	Potato	endoplasmic reticulum, golgi, vacuole	62.17	22.37
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	61.51	22.13
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	61.18	21.81
Os03t0165400-01	Rice	vacuole	60.2	21.76
EER92805	Sorghum	vacuole	59.54	21.5
TraesCS4A01G022500.2	Wheat	golgi, vacuole	58.22	20.97
TraesCS4B01G280900.1	Wheat	golgi, vacuole	58.22	20.95
Zm00001d048440_P003	Maize	vacuole	59.87	20.94
HORVU4Hr1G074280.4	Barley	vacuole	57.89	20.78
TraesCS4D01G279400.4	Wheat	vacuole	57.89	20.75
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	59.21	20.74
Bra014036.1-P	Field mustard	plastid	47.04	20.08
Bra027403.1-P	Field mustard	golgi, vacuole	54.61	19.79
Bra036334.1-P	Field mustard	golgi, vacuole	47.04	19.59
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	58.55	19.39
Bra021506.1-P	Field mustard	vacuole	54.28	19.16
Bra024237.1-P	Field mustard	vacuole	30.59	18.56
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	43.42	18.54
Bra006850.1-P	Field mustard	golgi, vacuole	42.11	17.73
Bra035634.1-P	Field mustard	golgi, vacuole	42.11	17.73
Bra019120.1-P	Field mustard	golgi, vacuole	40.46	17.28
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	41.45	17.21
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	39.47	16.39
Bra011946.1-P	Field mustard	golgi, vacuole	44.74	16.09
Bra000493.1-P	Field mustard	golgi, vacuole	44.41	16.0
Bra024238.1-P	Field mustard	golgi, vacuole	35.86	14.71
Bra021814.1-P	Field mustard	plastid	41.78	14.22
Bra002325.1-P	Field mustard	golgi, vacuole	38.49	14.11
Bra013052.1-P	Field mustard	golgi, vacuole	38.16	13.71
Bra003128.1-P	Field mustard	extracellular, vacuole	31.58	13.58
Bra017687.1-P	Field mustard	vacuole	37.17	13.39
Bra029200.1-P	Field mustard	vacuole	31.25	13.19
Bra001991.1-P	Field mustard	golgi, vacuole	35.2	13.18
Bra011577.1-P	Field mustard	vacuole	36.51	13.14
Bra033571.1-P	Field mustard	cytosol	35.86	11.4

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:35.1	EnsemblPlantsGene:Bra017756	EnsemblPlants:Bra017756.1	EnsemblPlants:Bra017756.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_Hdrlase_35	InterPro:IPR008979	UniProt:M4DMM1	PRINTS:PR00742	PANTHER:PTHR23421	PANTHER:PTHR23421:SF79
SUPFAM:SSF49785	UniParc:UPI0002540BE1	:	:	:	:

Description

AT4G36360 (E=5e-136) BGAL3 | BGAL3 (beta-galactosidase 3); beta-galactosidase/ catalytic/ cation binding / sugar binding

Coordinates

chrA03:-:30265036..30273697

Molecular Weight (calculated)

33478.7 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.446

Length

304 amino acids

Sequence
(BLAST)

001: MRVKENGRKE TTVCVGSWHI RGQELTQDTC TEAFPTKLGA SIPKLGPLGV VGGSIKNVGG HFESWNTGIL GPVALHGLSQ GKRDLSWQKW TYQVGLRGEA
101: MNLAYPTNTP SVEWMDASFT VQKPQPLTWH KTYFDAPEGD EPLALDMEGM GKGQILVNGE SIGRYWTTFA TGDCGNCSYT GTYKPNKCLS GCGQPTQRYY
201: HVPRSWLKPS QNLLVIFEEI GGNPSAVSLV KRSVSGVCAE VSEYHLNIKN WQLESYGKGQ TFHRPKVHWK SSPGQAISAI KFASFVTPLR KCGSYQQGEF
301: HAAT

Best Arabidopsis Sequence Match ( AT1G45130.1 )
(BLAST)

001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN

Arabidopsis Description

BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.