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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 7
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:golgi
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G36360.1 KRH42483 AT2G01950.1 19000166
AT4G36360.1 KRH58580 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH28740 Soybean nucleus 97.06 96.6
KRH08131 Soybean nucleus 86.81 86.91
KRH69834 Soybean extracellular, golgi 86.57 86.67
VIT_04s0023g02690.t01 Wine grape extracellular, golgi 81.86 82.25
AT4G36360.1 Thale cress endoplasmic reticulum, golgi, vacuole 79.62 78.97
PGSC0003DMT400009096 Potato endoplasmic reticulum, golgi, vacuole 78.09 78.46
Solyc02g084720.2.1 Tomato endoplasmic reticulum, golgi, vacuole 77.86 78.22
Bra011677.1-P Field mustard golgi, vacuole 78.68 78.04
CDX69219 Canola vacuole 75.74 78.03
CDX75569 Canola golgi, vacuole 75.74 77.75
CDY59693 Canola vacuole 78.33 77.69
KRH15132 Soybean mitochondrion, nucleus 64.43 74.73
KRH61101 Soybean nucleus 64.19 74.05
KRH05876 Soybean nucleus 63.84 74.04
GSMUA_Achr4P06620_001 Banana cytosol 55.71 73.45
GSMUA_Achr4P13580_001 Banana golgi, vacuole 74.44 72.81
GSMUA_Achr9P21610_001 Banana extracellular, golgi 72.56 72.22
EER92805 Sorghum vacuole 71.26 71.85
CDY59691 Canola cytosol, nucleus, vacuole 29.68 71.59
Os03t0165400-01 Rice vacuole 70.91 71.58
CDY59725 Canola cytosol 26.03 70.83
TraesCS4B01G280900.1 Wheat golgi, vacuole 70.2 70.53
TraesCS4A01G022500.2 Wheat golgi, vacuole 70.08 70.5
TraesCS4D01G279400.4 Wheat vacuole 70.32 70.4
HORVU4Hr1G074280.4 Barley vacuole 69.73 69.89
KRH51779 Soybean vacuole 58.54 69.71
Zm00001d048440_P003 Maize vacuole 71.02 69.39
Bra017756.1-P Field mustard cytosol, nucleus, vacuole 23.79 66.45
KRH10007 Soybean nucleus 65.61 66.31
Zm00001d027803_P002 Maize golgi, plasma membrane, vacuole 71.26 65.9
KRH23324 Soybean vacuole 65.25 65.87
KRH44153 Soybean nucleus 64.66 65.12
KRH47126 Soybean nucleus 64.55 64.85
KRH37385 Soybean nucleus 53.47 62.97
KRH12385 Soybean vacuole 53.0 62.41
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 59.6 60.31
KRH02714 Soybean golgi, vacuole 59.36 60.07
KRH22910 Soybean nucleus 55.59 56.19
KRH26431 Soybean golgi, vacuole 54.89 55.48
KRH29942 Soybean extracellular, golgi, vacuole 53.71 54.42
KRG89008 Soybean nucleus 53.47 54.31
KRH63980 Soybean vacuole 51.59 51.96
KRH53957 Soybean nucleus 51.0 51.24
KRH40964 Soybean golgi, vacuole 42.28 50.99
KRH64633 Soybean vacuole 40.64 49.57
KRH63978 Soybean golgi, vacuole 41.7 49.37
KRH53958 Soybean golgi, vacuole 41.58 49.23
KRH53267 Soybean golgi, vacuole 40.4 49.21
KRH19351 Soybean extracellular, golgi, vacuole 46.88 48.13
KRH38264 Soybean endoplasmic reticulum, golgi, vacuole 46.76 47.72
KRH02579 Soybean extracellular, golgi, vacuole 47.0 47.27
KRH70131 Soybean vacuole 46.05 46.83
KRH42784 Soybean nucleus 50.06 46.75
KRH07365 Soybean extracellular, golgi, vacuole 45.35 46.61
KRH48710 Soybean vacuole 45.58 45.74
KRH48708 Soybean vacuole 45.47 45.63
KRH06832 Soybean mitochondrion 38.52 43.6
KRH60700 Soybean extracellular, golgi, vacuole 42.28 42.54
KRH38266 Soybean cytosol, peroxisome 29.09 42.22
KRH24309 Soybean golgi, vacuole 41.7 41.99
KRH29286 Soybean extracellular, golgi, vacuole 41.58 41.92
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80EMBL:ACUP02000636EnsemblPlantsGene:GLYMA_01G170200GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005575GO:GO:0005618
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030312InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979
UniProt:K7K4B2EnsemblPlants:KRH76716ProteinID:KRH76716ProteinID:KRH76716.1InterPro:Lectin_gal-bd_domPFAM:PF01301
PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF79
MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0002336CA6SEG:seg
Description
hypothetical protein
Coordinates
chr1:+:50763577..50769441
Molecular Weight (calculated)
94462.9 Da
IEP (calculated)
7.377
GRAVY (calculated)
-0.299
Length
849 amino acids
Sequence
(BLAST)
001: METTSVSKMQ FAAFFCLALW LGFQLEQVHC SVTYDRKAIL INGQRRILFS GSIHYPRSTP DMWEDLIYKA KEGGLDVIET YVFWNVHEPS RGNYNFEGRY
101: DLVRFVKTIQ KAGLYANLRI GPYVCAEWNF GGFPVWLKYV PGISFRTDNE PFKKAMQGFT EKIVGMMKSE RLYESQGGPI ILSQIENEYG AQSKLLGSAG
201: QNYVNWAAKM AVETGTGVPW VMCKEDDAPD PVINTCNGFY CDYFTPNKPY KPSIWTEAWS GWFSEFGGPN HERPVQDLAF GVARFIQKGG SFVNYYMYHG
301: GTNFGRTAGG PFITTSYDYD APLDEYGLIR QPKYGHLKEL HKAIKMCERA LVSTDPAVTS LGNFQQAHVY SAKSGDCAAF LSNFDTKSSV RVMFNNMHYN
401: LPPWSISILP DCRNVVFNTA KVGVQTSQMQ MLPTNTRMFS WESFDEDISS LDDGSSITTT TSGLLEQINV TRDTSDYLWY ITSVDIGSSE SFLRGGKLPT
501: LIVQSTGHAV HVFINGQLSG SAYGTREDRR FTYTGTVNLR AGTNRIALLS VAVGLPNVGG HFETWNTGIL GPVVLRGFDQ GKLDLSWQKW TYQVGLKGEA
601: MNLASPNGIS SVEWMQSALV SDKNQPLTWH KTYFDAPDGD EPLALDMEGM GKGQIWINGL SIGRYWTALA AGNCNGCSYA GTFRPPKCQV GCGQPTQRWY
701: HVPRSWLKPD HNLLVVFEEL GGDPSKISLV KRSVSSVCAD VSEYHPNIRN WHIDSYGKSE EFHPPKVHLH CSPGQTISSI KFASFGTPLG TCGNYEKGVC
801: HSSTSHATLE KKCIGKPRCT VTVSNSNFGQ DPCPNVLKRL SVEAVCAPN
Best Arabidopsis Sequence Match ( AT4G36360.1 )
(BLAST)
001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP
Arabidopsis Description
BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.