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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 6
  • golgi 6
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH29942 Soybean extracellular, golgi, vacuole 88.64 88.42
KRH22910 Soybean nucleus 82.54 82.14
KRH26431 Soybean golgi, vacuole 81.22 80.83
VIT_06s0004g03020.t01 Wine grape extracellular 75.84 74.94
Bra011946.1-P Field mustard golgi, vacuole 72.01 71.24
CDY15749 Canola golgi, vacuole 71.89 71.21
AT2G28470.1 Thale cress endoplasmic reticulum, golgi, vacuole 72.37 71.01
Bra000493.1-P Field mustard golgi, vacuole 71.65 70.97
CDY04567 Canola golgi, vacuole 72.13 70.94
Solyc11g069270.1.1 Tomato extracellular 72.13 70.77
CDY31204 Canola golgi, vacuole 71.41 70.73
PGSC0003DMT400020941 Potato extracellular 71.89 70.54
CDX83288 Canola golgi, vacuole 71.29 70.53
GSMUA_Achr4P20830_001 Banana golgi, vacuole 70.45 67.62
GSMUA_Achr4P22060_001 Banana golgi, vacuole 67.22 66.9
EER92534 Sorghum endoplasmic reticulum, golgi 67.7 65.81
TraesCS4A01G083700.3 Wheat extracellular 66.99 65.65
TraesCS4B01G220500.1 Wheat golgi 66.15 64.83
HORVU0Hr1G008780.10 Barley plasma membrane, vacuole 66.99 64.44
TraesCS4D01G220800.2 Wheat vacuole 66.39 64.01
Zm00001d028474_P002 Maize vacuole 68.3 63.59
Os03t0255100-01 Rice extracellular 66.15 57.85
KRH12385 Soybean vacuole 49.4 57.28
KRH37385 Soybean nucleus 49.04 56.87
KRH10007 Soybean nucleus 55.5 55.24
KRH23324 Soybean vacuole 55.02 54.7
KRH08131 Soybean nucleus 55.14 54.36
KRH15132 Soybean mitochondrion, nucleus 47.37 54.1
KRH05876 Soybean nucleus 47.25 53.96
KRH47126 Soybean nucleus 54.43 53.85
KRH69834 Soybean extracellular, golgi 54.55 53.77
KRH44153 Soybean nucleus 54.19 53.74
KRH76716 Soybean nucleus 54.31 53.47
KRH61101 Soybean nucleus 47.01 53.4
KRH28740 Soybean nucleus 54.07 52.99
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 52.75 52.56
KRH02714 Soybean golgi, vacuole 52.15 51.97
KRH63980 Soybean vacuole 51.79 51.36
KRH19351 Soybean extracellular, golgi, vacuole 50.6 51.15
KRH02579 Soybean extracellular, golgi, vacuole 51.32 50.83
KRH53957 Soybean nucleus 51.32 50.77
KRH42784 Soybean nucleus 54.78 50.38
KRH51779 Soybean vacuole 42.94 50.35
KRH38264 Soybean endoplasmic reticulum, golgi, vacuole 50.0 50.24
KRH64633 Soybean vacuole 41.27 49.57
KRH53267 Soybean golgi, vacuole 40.79 48.92
KRH07365 Soybean extracellular, golgi, vacuole 48.21 48.79
KRH70131 Soybean vacuole 48.45 48.5
KRH40964 Soybean golgi, vacuole 40.79 48.44
KRH48710 Soybean vacuole 48.92 48.35
KRH48708 Soybean vacuole 48.92 48.35
KRH63978 Soybean golgi, vacuole 40.43 47.14
KRH53958 Soybean golgi, vacuole 40.31 47.0
KRH06832 Soybean mitochondrion 40.79 45.47
KRH38266 Soybean cytosol, peroxisome 30.74 43.93
KRH60700 Soybean extracellular, golgi, vacuole 42.22 41.82
KRH29286 Soybean extracellular, golgi, vacuole 42.11 41.81
KRH24309 Soybean golgi, vacuole 42.11 41.76
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23EntrezGene:100796895
Gene3D:2.60.120.260Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80EnsemblPlantsGene:GLYMA_U018900GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005488GO:GO:0005575GO:GO:0005618
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787GO:GO:0016798GO:GO:0030246GO:GO:0030312InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFUniProt:I1LKE7InterPro:IPR000922
InterPro:IPR008979EnsemblPlants:KRG89008ProteinID:KRG89008ProteinID:KRG89008.1InterPro:Lectin_gal-bd_domPFAM:PF01301
PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF72
MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000233D6DB
Description
hypothetical protein
Coordinates
chrscaffold_21:+:3187047..3193966
Molecular Weight (calculated)
91191.8 Da
IEP (calculated)
7.309
GRAVY (calculated)
-0.164
Length
836 amino acids
Sequence
(BLAST)
001: MRTSQILLVL LWFFCIYAPS SFGANVTYDH RALVIDGKRR VLVSGSIHYP RSTPEMWPDL IQKSKDGGLD VIETYVFWNL HEPVRGQYNF EGRGDLVKFV
101: KVVAAAGLYV HLRIGPYACA EWNYGGFPLW LHFIPGIQFR TDNKPFEAEM KQFTAKIVDL MKQENLYASQ GGPIILSQIE NEYGNIEADY GPAAKSYIKW
201: AASMATSLGT GVPWVMCQQQ NAPDPIINAC NGFYCDQFKP NSNTKPKIWT EGYTGWFLAF GDAVPHRPVE DLAFAVARFY QRGGTFQNYY MYHGGTNFGR
301: ASGGPFVASS YDYDAPIDEY GFIRQPKWGH LKDVHKAIKL CEEALIATDP TITSLGPNIE AAVYKTGVVC AAFLANIATS DATVTFNGNS YHLPAWSVSI
401: LPDCKNVVLN TAKITSASMI SSFTTESLKD VGSLDDSGSR WSWISEPIGI SKADSFSTFG LLEQINTTAD RSDYLWYSLS IDLDAGAQTF LHIKSLGHAL
501: HAFINGKLAG SGTGNHEKAN VEVDIPITLV SGKNTIDLLS LTVGLQNYGA FFDTWGAGIT GPVILKCLKN GSNVDLSSKQ WTYQVGLKNE DLGLSSGCSG
601: QWNSQSTLPT NQPLTWYKTN FVAPSGNNPV AIDFTGMGKG EAWVNGQSIG RYWPTYASPK GGCTDSCNYR GAYDASKCLK NCGKPSQTLY HVPRSWLRPD
701: RNTLVLFEES GGNPKQISFA TKQIGSVCSH VSESHPPPVD SWNSNTESGR KVVPVVSLEC PYPNQVVSSI KFASFGTPLG TCGNFKHGLC SSNKALSIVQ
801: KACIGSSSCR IELSVNTFGD PCKGVAKSLA VEASCA
Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.