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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31204 Canola golgi, vacuole 97.28 97.39
CDY15749 Canola golgi, vacuole 89.59 89.69
CDY04567 Canola golgi, vacuole 88.52 88.0
AT2G28470.1 Thale cress endoplasmic reticulum, golgi, vacuole 87.22 86.5
KRH29942 Soybean extracellular, golgi, vacuole 72.07 72.67
KRH22910 Soybean nucleus 72.07 72.5
VIT_06s0004g03020.t01 Wine grape extracellular 72.07 71.99
KRH26431 Soybean golgi, vacuole 70.89 71.31
KRG89008 Soybean nucleus 70.53 71.29
PGSC0003DMT400020941 Potato extracellular 68.76 68.19
GSMUA_Achr4P20830_001 Banana golgi, vacuole 69.82 67.74
Solyc11g069270.1.1 Tomato extracellular 68.28 67.72
GSMUA_Achr4P22060_001 Banana golgi, vacuole 65.56 65.95
EER92534 Sorghum endoplasmic reticulum, golgi 66.63 65.47
TraesCS4A01G083700.3 Wheat extracellular 65.44 64.83
CDX88594 Canola golgi, vacuole 24.73 64.31
TraesCS4B01G220500.1 Wheat golgi 64.85 64.24
HORVU0Hr1G008780.10 Barley plasma membrane, vacuole 65.68 63.87
TraesCS4D01G220800.2 Wheat vacuole 65.09 63.44
CDX98327 Canola golgi, vacuole 18.82 63.35
Zm00001d028474_P002 Maize vacuole 67.22 63.25
CDX76255 Canola extracellular 8.99 59.38
Os03t0255100-01 Rice extracellular 65.92 58.26
CDX94367 Canola mitochondrion 46.75 55.48
CDY36028 Canola plastid 46.27 54.92
CDY53959 Canola golgi, vacuole 47.34 54.79
CDY47949 Canola golgi, vacuole 47.22 54.66
CDX75569 Canola golgi, vacuole 53.14 54.29
CDX92753 Canola golgi, vacuole 45.68 54.21
CDX95380 Canola vacuole 46.63 54.2
CDX69219 Canola vacuole 52.78 54.13
CDX97513 Canola golgi, vacuole 53.73 54.05
CDY11899 Canola golgi, vacuole 46.15 54.02
CDY51738 Canola golgi, vacuole 53.61 53.99
CDY23637 Canola golgi, vacuole 53.37 53.75
CDY37486 Canola golgi, vacuole 53.14 53.52
CDY42755 Canola vacuole 45.09 53.51
CDX76254 Canola golgi, nucleus, vacuole 37.16 53.4
CDY59693 Canola vacuole 54.08 53.39
CDX89360 Canola mitochondrion 43.55 52.65
CDY20708 Canola golgi, vacuole 44.85 52.49
CDY32919 Canola golgi, vacuole 44.85 52.49
CDY70160 Canola vacuole 33.25 51.56
CDY23785 Canola vacuole 54.2 51.29
CDY19166 Canola golgi, vacuole 53.61 51.01
CDY43757 Canola golgi, vacuole 44.5 50.74
CDX67790 Canola vacuole 48.88 50.67
CDY34975 Canola golgi, plasma membrane, vacuole 46.98 50.38
CDX84446 Canola golgi, vacuole 44.14 50.34
CDY28339 Canola vacuole 46.86 50.25
CDX93659 Canola vacuole 48.05 49.63
CDY65885 Canola vacuole 47.93 49.33
CDY69031 Canola cytosol, plastid, vacuole 35.03 47.67
CDY39845 Canola vacuole 40.0 46.94
CDX84445 Canola vacuole 39.76 46.67
CDY69471 Canola cytosol 22.96 46.63
CDY70594 Canola cytosol 22.96 46.63
CDY31349 Canola vacuole 40.12 45.75
CDY32304 Canola cytosol 45.92 43.99
CDY59691 Canola cytosol, nucleus, vacuole 18.22 43.75
CDY43756 Canola cytosol, nucleus, peroxisome 25.92 42.94
CDY59725 Canola cytosol 15.74 42.63
CDX75479 Canola vacuole 40.12 40.12
CDX69103 Canola vacuole 40.0 40.05
CDY40650 Canola vacuole 39.76 39.81
CDX72512 Canola vacuole 39.65 39.69
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 36.45 39.49
CDY53917 Canola plastid 46.51 38.19
CDX72747 Canola vacuole 40.0 38.15
CDX67763 Canola golgi, plasma membrane, vacuole 32.66 35.8
CDY22419 Canola cytosol 40.0 35.36
CDY70118 Canola cytosol 24.14 34.34
CDY02241 Canola golgi, vacuole 39.41 33.67
CDX89744 Canola vacuole 38.93 30.29
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078D7Q8EnsemblPlants:CDX83288ProteinID:CDX83288
ProteinID:CDX83288.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00138842001InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979
InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228
PANTHER:PTHR23421PANTHER:PTHR23421:SF74MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEB8AB::::
Description
BnaA03g22180D
Coordinates
chrLK031832:-:853749..858675
Molecular Weight (calculated)
92345.4 Da
IEP (calculated)
7.823
GRAVY (calculated)
-0.211
Length
845 amino acids
Sequence
(BLAST)
001: MVRGRKIEIV SFLLLLQIVV AAMAANVTYD HRALVIDGKR KILISGSIHY PRSTPEMWPD LIQKSKDGGL DVIETYVFWN GHEPHKNKYN FEGRYDLVKF
101: VKLVAKAGLY VHLRIGPYAC AEWNYGGFPV WLHFIPGIKF RTDNEPFKVY MQMYKLLIVD LMKQEKLYAS QGGPIILSQI ENEYGNVDSS YGSAGKSYMK
201: WSASMALSLD TGVPWNMCQQ GDAPDPIINT CNGFYCDQFT PNSNNKPKMW TENWSGWFLG FGDPTPYRPV EDLAFAVAIF YQRSGTFQNY YMYHGGTNFE
301: RTSGGPLIST SYDYDAPIDE YGLVRQPKWG HLRDLHKAIK LCEDALLATD PTVTSLGSNL VASVYKTSSG SCAAFLANIG TESDATVTFN GNSYHLPAWS
401: ISILPDCKNV AFNTAKINAA TESTTFSSQS LKPNADSSEE LGSQWSYIKE PIGISKADAF VKPGLLEQIN TTADESDYLW YSLRMDIKGD ETFLDEGSKA
501: VLHVQSIGQV VYAFINGKLA GSGNGKQKIS LDIPINLVTG KNTIDLLSVT VGLANYGAFF DLFGAGITGP VTLKSAKSGS SIDLSSQQWT YQVGLKGEDT
601: NLGSGDSSEW VSKSPLPTMQ PLVWYKTTFD APSGSDPVAI DFTGTGKGIA WVNGQSIGRY WPTSIARNNG CTDSCNYRGS YSSNKCLKNC GKPSQTLYHV
701: PRSWIKPSGN TLVLLEEMGG DPTKISFATK QTGSSLCLTV SQSHPAPVDS WASDSKILNR TSPVLSLKCP VSTHVITSIN FASFGTPTGT CGSFSHGRCN
801: SPRSLSIVRK ACVGSRSCKV EVSTRVFGDP CRSLAKSLAV EASCS
Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.