CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70160	Canola	vacuole	55.67	90.09
CDX93659	Canola	vacuole	82.43	88.88
CDX67790	Canola	vacuole	82.09	88.83
CDX98327	Canola	golgi, vacuole	25.17	88.45
CDY69031	Canola	cytosol, plastid, vacuole	62.13	88.24
CDY34975	Canola	golgi, plasma membrane, vacuole	78.34	87.69
CDY28339	Canola	vacuole	78.23	87.56
AT1G31740.1	Thale cress	vacuole	70.63	79.97
CDY65885	Canola	vacuole	73.92	79.42
CDY53917	Canola	plastid	79.37	68.03
PGSC0003DMT400059880	Potato	cytosol	56.35	64.55
VIT_11s0016g00680.t01	Wine grape	vacuole	60.88	64.31
Solyc07g042220.1.1	Tomato	unclear	59.07	63.69
KRH19351	Soybean	extracellular, golgi, vacuole	58.84	62.76
KRH02579	Soybean	extracellular, golgi, vacuole	58.28	60.9
CDX67763	Canola	golgi, plasma membrane, vacuole	51.59	59.01
CDX88594	Canola	golgi, vacuole	21.54	58.46
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	50.0	56.18
CDX76255	Canola	extracellular	7.94	54.69
Os06t0628500-00	Rice	extracellular, golgi, vacuole	18.14	54.42
HORVU2Hr1G057440.2	Barley	vacuole	31.97	53.82
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	37.53	53.47
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	31.97	53.21
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	50.23	52.68
HORVU1Hr1G003210.2	Barley	golgi, vacuole	47.39	50.54
Os10t0330600-01	Rice	extracellular	47.39	50.48
TraesCS1A01G024100.1	Wheat	vacuole	47.39	50.48
Os10t0340600-01	Rice	extracellular, golgi, vacuole	47.05	50.12
HORVU1Hr1G003200.1	Barley	golgi, vacuole	47.17	50.12
TraesCS1B01G030400.1	Wheat	vacuole	47.05	49.94
TraesCS1D01G024200.1	Wheat	vacuole	46.94	49.94
Zm00001d043393_P001	Maize	extracellular	46.37	49.76
EES03081	Sorghum	extracellular	46.26	49.16
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	49.55	48.66
CDY36028	Canola	plastid	37.98	47.05
CDY15749	Canola	golgi, vacuole	44.78	46.8
CDX95380	Canola	vacuole	38.55	46.77
CDY53959	Canola	golgi, vacuole	38.66	46.71
CDY11899	Canola	golgi, vacuole	38.1	46.54
CDY47949	Canola	golgi, vacuole	38.44	46.44
CDY04567	Canola	golgi, vacuole	44.67	46.35
CDX94367	Canola	mitochondrion	37.3	46.21
CDY31204	Canola	golgi, vacuole	43.99	45.97
CDX83288	Canola	golgi, vacuole	43.99	45.92
CDY20708	Canola	golgi, vacuole	37.3	45.57
CDY32919	Canola	golgi, vacuole	37.19	45.43
CDX92753	Canola	golgi, vacuole	36.51	45.22
CDX76254	Canola	golgi, nucleus, vacuole	30.05	45.07
CDX97513	Canola	golgi, vacuole	42.86	45.0
CDY42755	Canola	vacuole	36.28	44.94
CDY23637	Canola	golgi, vacuole	42.74	44.93
CDY37486	Canola	golgi, vacuole	42.52	44.7
CDY51738	Canola	golgi, vacuole	42.29	44.46
CDX89360	Canola	mitochondrion	34.58	43.63
CDY43757	Canola	golgi, vacuole	36.62	43.59
CDX84446	Canola	golgi, vacuole	36.62	43.59
CDX75569	Canola	golgi, vacuole	39.91	42.56
CDY59693	Canola	vacuole	41.27	42.52
CDX69219	Canola	vacuole	39.46	42.23
CDY39845	Canola	vacuole	33.79	41.39
CDX84445	Canola	vacuole	33.56	41.11
CDY19166	Canola	golgi, vacuole	40.7	40.43
CDY23785	Canola	vacuole	40.7	40.2
CDY31349	Canola	vacuole	33.56	39.95
CDY69471	Canola	cytosol	18.03	38.22
CDY70594	Canola	cytosol	18.03	38.22
CDX75479	Canola	vacuole	36.51	38.11
CDX69103	Canola	vacuole	36.28	37.91
CDY43756	Canola	cytosol, nucleus, peroxisome	21.77	37.65
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	32.88	37.18
CDX72512	Canola	vacuole	35.37	36.97
CDY40650	Canola	vacuole	35.37	36.97
CDX72747	Canola	vacuole	34.92	34.76
CDY59725	Canola	cytosol	12.24	34.62
CDY59691	Canola	cytosol, nucleus, vacuole	13.61	34.09
CDY70118	Canola	cytosol	22.68	33.67
CDY22419	Canola	cytosol	34.81	32.11
CDY02241	Canola	golgi, vacuole	35.37	31.55
CDX89744	Canola	vacuole	35.49	28.82

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078H4H7	UniProt:A0A078H4H7	EnsemblPlants:CDY32304
ProteinID:CDY32304	ProteinID:CDY32304.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565
GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
GO:GO:0030246	EnsemblPlantsGene:GSBRNA2T00051780001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF88	MetaCyc:PWY-6807
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0004EEFA8B	SEG:seg	:	:

Description

BnaC05g28820DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078H4H7]

Coordinates

chrLK032291:-:389725..401362

Molecular Weight (calculated)

99316.0 Da

IEP (calculated)

7.932

GRAVY (calculated)

-0.338

Length

882 amino acids

Sequence
(BLAST)

001: MDFIDEIHQK STTVTICDLD RLSTKTPSST SASPQGRIKL FGTILYQKNR YFFLYLSLQF SRVNMASLRF ILCCVLVNCA CATIVSHDGR AITIDGHRRV
101: LLSGSIHYPR STPEMWPDLI KKGKEGGLDA IETYVFWNAH EPTRRQYDFS GKLDLIRFLK TIQDEGLYGV LRIRPYACAE GITGFPVWLH NMPGMVFRTT
201: NKAFMDEIQN FTTMIVDMVM KEKLFASQGG PIILAQIENE YGNIMGPYGE AGESYIKLCA NMAQALNVGV PWIICQQNYA PQPMLNTCNG FYCDNFTPNN
301: LNTPKMWTEN WTGWFKQWGG KNPHRTTEDV AFSVARFFQR GGTFNNYYMY HRGTNFDRSA GGPYITTSYD YDAPLDEYGN LNQPKYGHLK QLHDVLHSME
401: KTLTYGNIST IDFGNSASAT IYTTQEGYSC FFGNGNENSD ATISFRGESY VVPAWSVTIL PDCKTEAYNT AKITTQTSMM VKKPNEAEDD PSTLKWSWRP
501: ENMDNFVLRG KGESTNTQLF DQKVVSNDQS DYLWYMTTVK FRKRDPFMGK NMSLRVNSTA HVLRVFVNGK HIGNQHAENE KFHYVFEKDA KFKSGRNVIF
601: LLSITVGLQN YGAFFESVPV GITGPIFIIG RNGDEIIVKD LSSHKWSYKT GLNGFENKLF KTESPSKWSF ESVPLNRTMT WYKTTFKAPL GNDPVVVDLL
701: GLGKGTAWVN GNNIGCYWLA FNSSSDGCSA KCNYRGAYYA EKYQTNCGEP TQRWYHVPRS FLITEGVNTL VLFEEMGGNP SLVNFQTTRV GSVCANVYEK
801: NVIELSCDRK TISAIKFASF GNSDGNCGSF VKGTCEGSKN AVDILTKECI GKEKCSIDVT AEKFGVPDCS GVARRLPIEA IC

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.