Factsheet for Os10t0330600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

extracellular: 23159799
plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0628500-00	Rice	extracellular, golgi, vacuole	34.18	96.26
Zm00001d043393_P001	Maize	extracellular	78.26	78.83
EES03081	Sorghum	extracellular	78.74	78.55
Os10t0340600-01	Rice	extracellular, golgi, vacuole	78.5	78.5
HORVU2Hr1G057440.2	Barley	vacuole	49.52	78.24
TraesCS1D01G024200.1	Wheat	vacuole	77.78	77.68
TraesCS1A01G024100.1	Wheat	vacuole	77.66	77.66
TraesCS1B01G030400.1	Wheat	vacuole	77.29	77.02
HORVU1Hr1G003210.2	Barley	golgi, vacuole	76.09	76.18
HORVU1Hr1G003200.1	Barley	golgi, vacuole	76.33	76.14
CDX98327	Canola	golgi, vacuole	19.08	62.95
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	54.95	57.96
CDY70160	Canola	vacuole	36.59	55.6
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	41.3	55.25
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.9	54.53
CDX67790	Canola	vacuole	52.66	53.5
CDX93659	Canola	vacuole	52.66	53.3
CDY65885	Canola	vacuole	52.42	52.86
CDY28339	Canola	vacuole	50.24	52.79
CDY34975	Canola	golgi, plasma membrane, vacuole	50.12	52.66
PGSC0003DMT400059880	Potato	cytosol	48.91	52.6
AT1G31740.1	Thale cress	vacuole	49.4	52.5
KRH07365	Soybean	extracellular, golgi, vacuole	51.69	51.82
VIT_11s0016g00680.t01	Wine grape	vacuole	51.93	51.5
Solyc07g042220.1.1	Tomato	unclear	50.72	51.34
CDY69031	Canola	cytosol, plastid, vacuole	38.04	50.72
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	44.81	50.68
KRH19351	Soybean	extracellular, golgi, vacuole	50.6	50.67
KRH02579	Soybean	extracellular, golgi, vacuole	51.21	50.24
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	54.35	50.11
Bra003128.1-P	Field mustard	extracellular, vacuole	42.63	49.93
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	50.12	49.88
KRH48708	Soybean	vacuole	50.85	49.76
KRH48710	Soybean	vacuole	50.72	49.65
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	49.76	49.46
AT5G20710.1	Thale cress	vacuole	48.79	48.91
KRH70131	Soybean	vacuole	49.03	48.62
Bra002325.1-P	Field mustard	golgi, vacuole	48.67	48.61
CDY32304	Canola	cytosol	50.48	47.39
KRH06832	Soybean	mitochondrion	42.39	46.8
KRH38266	Soybean	cytosol, peroxisome	32.49	45.98
Os09t0539200-01	Rice	vacuole	24.64	45.74
Os06t0573600-01	Rice	plasma membrane, vacuole	39.49	45.73
Os01t0580200-01	Rice	golgi, vacuole	43.36	43.41
Os02t0219200-01	Rice	peroxisome, vacuole	26.21	43.4
Os03t0165400-01	Rice	vacuole	42.15	41.5
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	45.17	40.7
CDY53917	Canola	plastid	50.0	40.23
Os03t0255100-01	Rice	extracellular	46.14	39.96
Os12t0429200-01	Rice	plasma membrane	42.87	38.63
Os08t0549200-01	Rice	plasma membrane	39.37	38.44
Os05t0428100-00	Rice	golgi, vacuole	37.32	38.1
CDX67763	Canola	golgi, plasma membrane, vacuole	35.39	38.0

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4348337	ProteinID:AAL31090.1	ProteinID:AAN04162.1	ProteinID:AAP53027.2
EMBL:AK119350	ProteinID:BAF26280.1	ProteinID:BAS98717.1	ProteinID:BAT10359.1	ProteinID:EAZ15685.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312
GO:GO:0048046	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	EnsemblPlantsGene:Os10g0330600	EnsemblPlants:Os10t0330600-01	PFAM:PF01301
PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF68
UniProt:Q7G3T8	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000DB47FD
RefSeq:XP_015613802.1	SEG:seg	:	:	:	:

Description

BETA-GALACTOSIDASE 12Glycoside hydrolase, family 35 protein. (Os10t0330600-01)

Coordinates

chr10:+:9349051..9356434

Molecular Weight (calculated)

92004.8 Da

IEP (calculated)

6.503

GRAVY (calculated)

-0.314

Length

828 amino acids

Sequence
(BLAST)

001: MKTTMAAAAT CLVALLVVVL AEAAGVGCTT VAYNDRSLVI DGERRIIISG SIHYPRSTPE MWPDLIKKAK EGGLDAIETY VFWNGHEPHR RQYNFEGNYD
101: IIRFFKEIQN AGLYAILRIG PYICGEWNYG GLPAWLRDIP QMQFRMHNAP FENEMENFTT LIINKMKDAN MFAGQGGPII LAQIENEYGN VMGQLNNNQS
201: ASEYIHWCAD MANKQNVGVP WIMCQQDSDV PHNVVNTCNG FYCHDWFPNR TGIPKIWTEN WTGWFKAWDK PDFHRSAEDI AFAVAMFFQK RGSLQNYYMY
301: HGGTNFGRTS GGPYITTSYD YDAPLDEYGN LRQPKYGHLK DLHSVIKSIE KILVHGEYVD ANYSDNVTVT KYTLGSTSAC FINNRNDNKD LNVTLDGNTH
401: LLPAWSVSIL PDCKTVAFNS AKIKAQTTIM VKKANMVEKE PESLKWSWMR ENLTPFMTDE KGSYRKNELL EQIVTSTDQS DYLWYRTSLD HKGEASYTLF
501: VNTTGHELYA FVNGMLVGKN HSPNGHFVFQ LESAVKLHDG KNYISLLSAT IGLKNYGPLF EKMPAGIVGG PVKLIDNNGT GIDLSNSSWS YKAGLAGEYR
601: QIHLDKPGYR WDNNNGTVPI NRPFTWYKTT FQAPAGQDTV VVDLLGLNKG VAWVNGNNLG RYWPSYTAAE MGGCHHCDYR GVFQAEGDGQ KCLTGCGEPS
701: QRYYHVPRSF LKNGEPNTLI LFEEAGGDPS QVIFHSVVAG SVCVSAEVGD AITLSCGQHS KTISTIDVTS FGVARGQCGA YEGGCESKAA YKAFTEACLG
801: KESCTVQIIN ALTGSGCLSG VLTVQASC

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.