Factsheet for Zm00001d043393_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

extracellular: 22192489

msms PMID: 22192489 doi

K Witzel, M Shahzad, A Matros, HP Mock, KH Mühling

Institute of Plant Nutrition and Soil Science, Christian Albrechts University, Hermann-Rodewald-Strasse 2, 24118 Kiel, Germany. khmuehling@plantnutrition.uni-kiel.de.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03081	Sorghum	extracellular	90.88	90.0
Os06t0628500-00	Rice	extracellular, golgi, vacuole	30.41	85.03
Os10t0330600-01	Rice	extracellular	78.83	78.26
TraesCS1B01G030400.1	Wheat	vacuole	77.01	76.17
TraesCS1D01G024200.1	Wheat	vacuole	76.64	76.0
TraesCS1A01G024100.1	Wheat	vacuole	76.4	75.85
HORVU2Hr1G057440.2	Barley	vacuole	48.3	75.76
HORVU1Hr1G003200.1	Barley	golgi, vacuole	75.91	75.18
HORVU1Hr1G003210.2	Barley	golgi, vacuole	75.18	74.73
Os10t0340600-01	Rice	extracellular, golgi, vacuole	75.18	74.64
CDX98327	Canola	golgi, vacuole	18.98	62.15
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	54.99	57.58
CDY70160	Canola	vacuole	36.62	55.23
CDX67790	Canola	vacuole	52.31	52.76
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	39.66	52.67
CDY65885	Canola	vacuole	52.43	52.5
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	33.82	52.45
CDX93659	Canola	vacuole	52.19	52.45
CDY34975	Canola	golgi, plasma membrane, vacuole	50.24	52.41
CDY28339	Canola	vacuole	50.12	52.28
AT1G31740.1	Thale cress	vacuole	49.15	51.86
PGSC0003DMT400059880	Potato	cytosol	47.93	51.17
Solyc07g042220.1.1	Tomato	unclear	50.12	50.37
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	50.73	50.12
CDY69031	Canola	cytosol, plastid, vacuole	37.83	50.08
VIT_11s0016g00680.t01	Wine grape	vacuole	50.85	50.06
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	44.4	49.86
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	50.49	49.82
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	54.38	49.78
KRH07365	Soybean	extracellular, golgi, vacuole	49.76	49.52
KRH19351	Soybean	extracellular, golgi, vacuole	49.76	49.46
KRH48708	Soybean	vacuole	50.73	49.29
KRH48710	Soybean	vacuole	50.61	49.17
KRH02579	Soybean	extracellular, golgi, vacuole	50.0	48.7
Bra002325.1-P	Field mustard	golgi, vacuole	49.03	48.61
Bra003128.1-P	Field mustard	extracellular, vacuole	41.73	48.51
AT5G20710.1	Thale cress	vacuole	48.66	48.43
KRH70131	Soybean	vacuole	48.54	47.78
KRH06832	Soybean	mitochondrion	42.82	46.93
CDY32304	Canola	cytosol	49.76	46.37
KRH38266	Soybean	cytosol, peroxisome	32.48	45.64
Zm00001d046357_P001	Maize	extracellular	38.69	44.04
Zm00001d044290_P005	Maize	golgi, vacuole	43.8	43.37
Zm00001d028474_P002	Maize	vacuole	47.32	43.32
Zm00001d048440_P003	Maize	vacuole	42.7	40.39
CDY53917	Canola	plastid	50.0	39.94
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	41.97	39.84
Zm00001d053225_P005	Maize	golgi, vacuole	40.39	39.24
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	43.31	38.78
Zm00001d032022_P003	Maize	golgi, vacuole	39.66	38.35
Zm00001d053585_P002	Maize	plastid	38.56	38.24
Zm00001d041880_P001	Maize	extracellular, plasma membrane	42.21	37.8
CDX67763	Canola	golgi, plasma membrane, vacuole	35.28	37.61
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	37.35	37.44
Zm00001d042656_P001	Maize	golgi, vacuole	31.51	36.89
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	38.2	36.05
Zm00001d022621_P005	Maize	vacuole	36.74	33.78

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100382034
Gene3D:2.60.120.260	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EMBL:BT062954	UniProt:C0P3T5	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
ProteinID:ONM37752.1	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF68	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00018C6AEB
EnsemblPlantsGene:Zm00001d043393	EnsemblPlants:Zm00001d043393_P001	EnsemblPlants:Zm00001d043393_T001	SEG:seg	:	:

Description

Beta-galactosidase

Coordinates

chr3:-:198633149..198637378

Molecular Weight (calculated)

91146.2 Da

IEP (calculated)

7.869

GRAVY (calculated)

-0.290

Length

822 amino acids

Sequence
(BLAST)

001: MTALQFLLLA LVAVTQVASA TTVTYNDRAL VIDGQRRIIL SGSIHYPRST PQMWPDLINK AKEGGLNTIE TYVFWNGHEP RRRQYNFEGS YDIIRFFKEI
101: QNAGMHAILR IGPYICGEWN YGGLPAWLRD IPGMQFRLHN APFEREMETF TTLIVNKMKD VNMFAGQGGP IILAQIENEY GNIMGQLKNN QSASQYIHWC
201: ADMANKQEVG VPWIMCQQDN DVPHNVINTC NGFYCHDWFP NRTGIPKIWT ENWTGWFKAW DKPDFHRSAE DIAFAVAMFF QKRGSVHNYY MYHGGTNFGR
301: TSGGPYITTS YDYDAPLDEY GNIRQPKYGH LKDLHDLIRS MEKILVHGKY NDTSYGKNVT VTKYMYGGSS VCFINNQFVD RDMKVTLGGE THLVPAWSVS
401: ILPNCKTVAY NTAKIKTQTS VMVKKANSVE KEPETMRWSW MPENLKPFMT DHRGSFRQSQ LLEQIATSTD QSDYLWYRTS LEHKGEGSYT LYVNTSGHEM
501: YAFVNGRLVG QNHSADGAFV FQLQSPVKLH SGKNYVSLLS GTVGLKNYGP SFELVPAGIA GGPVKLVGTN GTAIDLTKSS WSYKSGLAGE LRQIHLDKPG
601: YKWQSHNGTI PVNRPFTWYK TTFEAPAGEE AVVVDLLGLN KGVAWVNGNS LGRYWPSYTA AEMPGCHVCD YRGKFIAEGD GIRCLTGCGE PAQRFYHVPR
701: SFLRAGEPNT LILFEEAGGD PTRAAFHTVA VGPVCVAAVE LGDDVTLSCG GHGRVVASVD VASFGVARGS CGAYKGGCES KAALKAFTDA CVGRESCTVK
801: YTAAFAGAGC QSGALTVQAT CS

Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)

001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC

Arabidopsis Description

BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.