Factsheet for VIT_08s0007g04270.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g00680.t01	Wine grape	vacuole	62.67	62.52
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	58.58	58.65
KRH48708	Soybean	vacuole	59.3	58.39
KRH48710	Soybean	vacuole	59.18	58.27
KRH70131	Soybean	vacuole	57.74	57.6
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	36.25	56.98
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	52.94	56.18
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	41.18	55.41
KRH06832	Soybean	mitochondrion	49.82	55.33
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	54.5	53.98
KRH38266	Soybean	cytosol, peroxisome	36.97	52.65
Os06t0628500-00	Rice	extracellular, golgi, vacuole	18.49	52.38
HORVU2Hr1G057440.2	Barley	vacuole	32.05	50.95
Os10t0340600-01	Rice	extracellular, golgi, vacuole	50.54	50.85
HORVU1Hr1G003210.2	Barley	golgi, vacuole	50.42	50.79
TraesCS1A01G024100.1	Wheat	vacuole	50.42	50.72
EES03081	Sorghum	extracellular	50.54	50.72
HORVU1Hr1G003200.1	Barley	golgi, vacuole	50.42	50.6
Zm00001d043393_P001	Maize	extracellular	49.82	50.49
TraesCS1D01G024200.1	Wheat	vacuole	50.18	50.42
VIT_06s0004g03020.t01	Wine grape	extracellular	51.14	50.35
TraesCS1B01G030400.1	Wheat	vacuole	50.18	50.3
Os10t0330600-01	Rice	extracellular	49.46	49.76
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	52.22	48.44
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	26.05	47.07
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	47.42	46.97
VIT_11s0016g02200.t01	Wine grape	vacuole	46.94	46.77
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	45.98	45.33
VIT_03s0038g00150.t01	Wine grape	vacuole	46.94	45.31
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	46.22	45.08
VIT_07s0031g02480.t01	Wine grape	extracellular	45.14	44.39
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	42.74	43.36
VIT_18s0001g02220.t01	Wine grape	vacuole	41.18	42.19
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	41.3	41.3

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100252769
wikigene:100252769	Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	ProteinID:CCB55375
ProteinID:CCB55375.1	UniProt:F6HKF3	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	EntrezGene:LOC100252769	wikigene:LOC100252769
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF88	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0001983E6D
ArrayExpress:VIT_08s0007g04270	EnsemblPlantsGene:VIT_08s0007g04270	EnsemblPlants:VIT_08s0007g04270.t01	RefSeq:XP_002284027	RefSeq:XP_002284027.1	SEG:seg

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:F6HKF3]

Coordinates

chr8:+:18228341..18233371

Molecular Weight (calculated)

92864.0 Da

IEP (calculated)

5.309

GRAVY (calculated)

-0.362

Length

833 amino acids

Sequence
(BLAST)

001: MVATMGSSSS FLVLSLFVLS FCLTCNADQI TSDARGIMIN GERKILISGS VHYPRSTPEM WPDLIQKSKD GGLNTIDTYV FWDLHEPQRR QYDFTGNKDL
101: VRFIKAIQAQ GLYAVLRIGP YVCAEWTYGG FPVWLHNQPS IQLRTNNTVY MSEMQTFTTM IVDMMKKEQL FASQGGPIII SQIENEYGNV MRAYHDAGVQ
201: YINWCAQMAA ALDTGVPWIM CQQDNAPQPM INTCNGYYCD QFTPNNPNSP KMWTENWSGW YKNWGGSDPH RTAEDLAFSV ARFYQLGGTF QNYYMYHGGT
301: NFGRTAGGPY ITTSYDYDAP LNEYGNKNQP KWGHLRDLHL LLLSMEKALT YGDVKNVDYE TLTSATIYSY QGKSSCFFGN SNADRDVTIN YGGVNYTIPA
401: WSVSILPDCS NEVYNTAKVN SQYSTFVKKG SEAENEPNSL QWTWRGETIQ YITPGRFTAS ELLDQKTVAE DTSDYLYYMT TVDISNDDPI WGKDLTLSVN
501: TSGHILHAFV NGEHIGYQYA LLGQFEFQFR RSVTLQLGKN EITLLSATVG LTNYGPDFDM VNQGIHGPVQ IIASNGSADI IKDLSNNNQW AYKAGLNGED
601: KKIFLGRARY NQWKSDNLPV NRSFVWYKAT FDAPPGEDPV VVDLMGLGKG EAWVNGHSLG RYWPSYIARG EGCSPECDYR GPYKAEKCNT NCGNPSQRWY
701: HVPRSFLAST DNRLVLFEEF GGNPSSVTFQ TVTVGNACAN AREGYTLELS CQGRAISGIK FASFGDPQGT CGKPFATGSQ VFEKGTCEAA DSLSIIQKLC
801: VGKYSCSIDV SEQILGPAGC TADTKRLAVE AIC

Best Arabidopsis Sequence Match ( AT5G20710.1 )
(BLAST)

001: MKMKHFTRLL SLFFILITSL SLAKSTIVSH DERAITINGK RRILLSGSIH YPRSTADMWP DLINKAKDGG LDAIETYVFW NAHEPKRREY DFSGNLDVVR
101: FIKTIQDAGL YSVLRIGPYV CAEWNYGGFP VWLHNMPNMK FRTVNPSFMN EMQNFTTKIV KMMKEEKLFA SQGGPIILAQ IENEYGNVIS SYGAEGKAYI
201: DWCANMANSL DIGVPWLMCQ QPNAPQPMLE TCNGFYCDQY EPTNPSTPKM WTENWTGWFK NWGGKHPYRT AEDLAFSVAR FFQTGGTFQN YYMYHGGTNF
301: GRVAGGPYIT TSYDYHAPLD EFGNLNQPKW GHLKQLHTVL KSMEKSLTYG NISRIDLGNS IKATIYTTKE GSSCFIGNVN ATADALVNFK GKDYHVPAWS
401: VSVLPDCDKE AYNTAKVNTQ TSIMTEDSSK PERLEWTWRP ESAQKMILKG SGDLIAKGLV DQKDVTNDAS DYLWYMTRLH LDKKDPLWSR NMTLRVHSNA
501: HVLHAYVNGK YVGNQFVKDG KFDYRFERKV NHLVHGTNHI SLLSVSVGLQ NYGPFFESGP TGINGPVSLV GYKGEETIEK DLSQHQWDYK IGLNGYNDKL
601: FSIKSVGHQK WANEKLPTGR MLTWYKAKFK APLGKEPVIV DLNGLGKGEA WINGQSIGRY WPSFNSSDDG CKDECDYRGA YGSDKCAFMC GKPTQRWYHV
701: PRSFLNASGH NTITLFEEMG GNPSMVNFKT VVVGTVCARA HEHNKVELSC HNRPISAVKF ASFGNPLGHC GSFAVGTCQG DKDAAKTVAK ECVGKLNCTV
801: NVSSDTFGST LDCGDSPKKL AVELEC

Arabidopsis Description

BGAL7Beta-galactosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.