Factsheet for VIT_11s0016g00680.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
golgi 4
mitochondrion 1
vacuole 4
extracellular 3
endoplasmic reticulum 2
plasma membrane 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98327	Canola	golgi, vacuole	22.75	75.7
PGSC0003DMT400059880	Potato	cytosol	66.11	71.69
Solyc07g042220.1.1	Tomato	unclear	68.26	69.68
KRH19351	Soybean	extracellular, golgi, vacuole	68.98	69.65
CDY70160	Canola	vacuole	44.91	68.81
KRH02579	Soybean	extracellular, golgi, vacuole	68.62	67.89
AT1G31740.1	Thale cress	vacuole	63.11	67.65
CDY34975	Canola	golgi, plasma membrane, vacuole	63.47	67.26
CDY28339	Canola	vacuole	63.35	67.13
CDX93659	Canola	vacuole	65.63	66.99
CDX67790	Canola	vacuole	65.15	66.75
CDY65885	Canola	vacuole	65.63	66.75
CDY69031	Canola	cytosol, plastid, vacuole	48.14	64.73
AT5G20710.1	Thale cress	vacuole	63.71	64.41
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	56.17	64.07
Bra002325.1-P	Field mustard	golgi, vacuole	63.59	64.05
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	62.52	62.67
Bra003128.1-P	Field mustard	extracellular, vacuole	52.22	61.67
CDY32304	Canola	cytosol	64.31	60.88
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	56.41	60.0
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	37.13	58.49
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	43.11	58.16
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	57.72	57.31
Os06t0628500-00	Rice	extracellular, golgi, vacuole	20.12	57.14
HORVU2Hr1G057440.2	Barley	vacuole	34.97	55.73
HORVU1Hr1G003210.2	Barley	golgi, vacuole	52.1	52.6
HORVU1Hr1G003200.1	Barley	golgi, vacuole	52.1	52.41
TraesCS1A01G024100.1	Wheat	vacuole	51.86	52.29
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	55.93	52.0
TraesCS1D01G024200.1	Wheat	vacuole	51.62	51.99
Os10t0330600-01	Rice	extracellular	51.5	51.93
TraesCS1B01G030400.1	Wheat	vacuole	51.5	51.74
VIT_06s0004g03020.t01	Wine grape	extracellular	52.22	51.54
CDY53917	Canola	plastid	63.47	51.51
Os10t0340600-01	Rice	extracellular, golgi, vacuole	50.78	51.21
EES03081	Sorghum	extracellular	50.66	50.96
Zm00001d043393_P001	Maize	extracellular	50.06	50.85
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	48.14	47.8
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	26.23	47.51
CDX67763	Canola	golgi, plasma membrane, vacuole	42.99	46.56
VIT_11s0016g02200.t01	Wine grape	vacuole	46.59	46.53
VIT_07s0031g02480.t01	Wine grape	extracellular	47.19	46.52
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	46.23	45.68
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	46.11	45.08
VIT_03s0038g00150.t01	Wine grape	vacuole	46.47	44.96
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	43.11	43.85
VIT_18s0001g02220.t01	Wine grape	vacuole	42.16	43.3
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	40.72	40.82

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100242240
wikigene:100242240	Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	ProteinID:CBI27773
ProteinID:CBI27773.3	UniProt:D7TCB5	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	EntrezGene:LOC100242240	wikigene:LOC100242240
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF88	SUPFAM:SSF49785	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI00015C90FD
ArrayExpress:VIT_11s0016g00680	EnsemblPlantsGene:VIT_11s0016g00680	EnsemblPlants:VIT_11s0016g00680.t01	RefSeq:XP_002276918	RefSeq:XP_002276918.2	SEG:seg

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:D7TCB5]

Coordinates

chr11:-:655658..659478

Molecular Weight (calculated)

92985.6 Da

IEP (calculated)

5.263

GRAVY (calculated)

-0.324

Length

835 amino acids

Sequence
(BLAST)

001: MYRTYFLGNT SVASSKNATH AISFCVLFVL LNVLASAVEV SYDGRALIID GKRRVLQSGS IHYPRSTPEM WPDLIRKAKA GGLDAIETYV FWNVHEPLRR
101: EYDFSGNLDL IRFIQTIQAE GLYAVLRIGP YVCAEWTYGG FPMWLHNMPG IEFRTANKVF MNEMQNFTTL IVDMAKQEKL FASQGGPIII AQIENEYGNI
201: MAPYGDAGKV YVDWCAAMAN SLDIGVPWIM CQQSDAPQPM INTCNGWYCD SFTPNNPNSP KMWTENWTGW FKNWGGKDPH RTAEDLSYSV ARFFQTGGTF
301: QNYYMYHGGT NFGRVAGGPY ITTSYDYDAP LDEFGNLNQP KWGHLKDLHT VLKSMEETLT EGNITTIDMG NSVEVTVYAT QKVSSCFFSN SNTTNDATFT
401: YGGTEYTVPA WSVSILPDCK KEVYNTAKVN AQTSVMVKNK NEAEDQPASL KWSWRPEMID DTAVLGKGQV SANRLIDQKT TNDRSDYLWY MNSVDLSEDD
501: LVWTDNMTLR VNATGHILHA YVNGEYLGSQ WATNGIFNYV FEEKVKLKPG KNLIALLSAT IGFQNYGAFY DLVQSGISGP VEIVGRKGDE TIIKDLSSHK
601: WSYKVGMHGM AMKLYDPESP YKWEEGNVPL NRNLTWYKTT FKAPLGTDAV VVDLQGLGKG EAWVNGQSLG RYWPSSIAED GCNATCDYRG PYTNTKCVRN
701: CGNPTQRWYH VPRSFLTADE NTLVLFEEFG GNPSLVNFQT VTIGTACGNA YENNVLELAC QNRPISDIKF ASFGDPQGSC GSFSKGSCEG NKDALDIIKK
801: ACVGKESCSL DVSEKAFGST SCGSIPKRLA VEAVC

Best Arabidopsis Sequence Match ( AT5G20710.1 )
(BLAST)

001: MKMKHFTRLL SLFFILITSL SLAKSTIVSH DERAITINGK RRILLSGSIH YPRSTADMWP DLINKAKDGG LDAIETYVFW NAHEPKRREY DFSGNLDVVR
101: FIKTIQDAGL YSVLRIGPYV CAEWNYGGFP VWLHNMPNMK FRTVNPSFMN EMQNFTTKIV KMMKEEKLFA SQGGPIILAQ IENEYGNVIS SYGAEGKAYI
201: DWCANMANSL DIGVPWLMCQ QPNAPQPMLE TCNGFYCDQY EPTNPSTPKM WTENWTGWFK NWGGKHPYRT AEDLAFSVAR FFQTGGTFQN YYMYHGGTNF
301: GRVAGGPYIT TSYDYHAPLD EFGNLNQPKW GHLKQLHTVL KSMEKSLTYG NISRIDLGNS IKATIYTTKE GSSCFIGNVN ATADALVNFK GKDYHVPAWS
401: VSVLPDCDKE AYNTAKVNTQ TSIMTEDSSK PERLEWTWRP ESAQKMILKG SGDLIAKGLV DQKDVTNDAS DYLWYMTRLH LDKKDPLWSR NMTLRVHSNA
501: HVLHAYVNGK YVGNQFVKDG KFDYRFERKV NHLVHGTNHI SLLSVSVGLQ NYGPFFESGP TGINGPVSLV GYKGEETIEK DLSQHQWDYK IGLNGYNDKL
601: FSIKSVGHQK WANEKLPTGR MLTWYKAKFK APLGKEPVIV DLNGLGKGEA WINGQSIGRY WPSFNSSDDG CKDECDYRGA YGSDKCAFMC GKPTQRWYHV
701: PRSFLNASGH NTITLFEEMG GNPSMVNFKT VVVGTVCARA HEHNKVELSC HNRPISAVKF ASFGNPLGHC GSFAVGTCQG DKDAAKTVAK ECVGKLNCTV
801: NVSSDTFGST LDCGDSPKKL AVELEC

Arabidopsis Description

BGAL7Beta-galactosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.