Factsheet for VIT_03s0038g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g110000.2.1	Tomato	nucleus	65.24	77.44
PGSC0003DMT400079498	Potato	vacuole	65.24	77.44
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	74.86	76.45
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	73.58	74.36
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	72.07	72.92
GSMUA_Achr4P06620_001	Banana	cytosol	54.0	72.36
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	72.54	72.12
EER92805	Sorghum	vacuole	68.95	70.67
Os03t0165400-01	Rice	vacuole	68.25	70.04
TraesCS4B01G280900.1	Wheat	golgi, vacuole	68.37	69.82
TraesCS4A01G022500.2	Wheat	golgi, vacuole	68.25	69.79
TraesCS4D01G279400.4	Wheat	vacuole	68.25	69.46
HORVU4Hr1G074280.4	Barley	vacuole	67.9	69.19
Zm00001d048440_P003	Maize	vacuole	69.29	68.81
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	69.64	65.47
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	62.22	63.85
VIT_11s0016g02200.t01	Wine grape	vacuole	61.07	63.04
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	28.74	53.8
VIT_06s0004g03020.t01	Wine grape	extracellular	52.38	53.43
VIT_07s0031g02480.t01	Wine grape	extracellular	50.52	51.48
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	46.23	48.6
VIT_18s0001g02220.t01	Wine grape	vacuole	45.77	48.59
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	45.31	46.94
VIT_11s0016g00680.t01	Wine grape	vacuole	44.96	46.47
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	43.45	45.02

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:100257138
wikigene:100257138	Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	ProteinID:CCB60722
ProteinID:CCB60722.1	UniProt:F6I1A6	EMBL:FN596508	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	EntrezGene:LOC100257138	wikigene:LOC100257138
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228
PANTHER:PTHR23421	PANTHER:PTHR23421:SF71	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000210AA86
ArrayExpress:VIT_03s0038g00150	EnsemblPlantsGene:VIT_03s0038g00150	EnsemblPlants:VIT_03s0038g00150.t01	RefSeq:XP_002263382	RefSeq:XP_002263382.2	SEG:seg

Description

Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:F6I1A6]

Coordinates

chr3:+:111028..117181

Molecular Weight (calculated)

96080.1 Da

IEP (calculated)

7.276

GRAVY (calculated)

-0.262

Length

863 amino acids

Sequence
(BLAST)

001: MGAISDSKWF LLCMWVFLCI QLTQCSVTYD RKALIINGQR RILFSGSIHY PRSTPQMWEG LIQKAKDGGL DAIDTYVFWN LHEPSPGKYN FEGRYDLVRF
101: IKLIQKAGLY VHLRIGPYIC AEWNFGGFPV WLKFVPGVSF RTDNEPFKMA MQRFTQKIVQ MMKNEKLFES QGGPIIISQI ENEYGHESRA FGAPGYAYLT
201: WAAKMAVAMD TGVPWVMCKE DDAPDPVINT CNGFYCDYFS PNKPNKPTLW TEAWSGWFTE FAGPIQQRPV EDLSFAVTRF IQKGGSFVNY YMYHGGTNFG
301: RTAGGPFITT SYDYDAPIDE YGLIRQPKYG HLKELHKAIK LCERALLSAD PAETSLGTYA KAQVFYSESG GCAAFLSNYN PTSAARVTFN SMHYNLAPWS
401: ISILPDCKNV VFNTATVSET EDSSKGMLLI MHKVGVQTSQ MQMLPTNSEL LSWETFNEDI SSADDDSTIT VVGLLEQLNV TRDTSDYLWY STRIDISSSE
501: SFLHGGQHPT LIVQSTGHAM HVFINGHLSG SAFGTREDRR FTFTGDVNLQ TGSNIISVLS IAVGLPNNGP HFETWSTGVL GPVVLHGLDE GKKDLSWQKW
601: SYQVGLKGEA MNLVSPNVIS NIDWMKGSLF AQKQQPLTWY KAYFDAPDGD EPLALDMGSM GKGQVWINGQ SIGRYWTAYA KGNCSGCSYS GTFRTTKCQF
701: GCGQPTQRWY HVPRSWLKPT QNLLVLFEEL GGDASKISFM KRSVTTVCAE VSEHHPNIKN WHIESQERPE EMSKPKVHLH CASGQSISAI KFASFGTPSG
801: TCGNFQKGTC HAPTSQAVLE KKCIGQQKCS VAVSSSNFAN PCPNMFKKLS VEAVCAPSTT SNA

Best Arabidopsis Sequence Match ( AT4G36360.1 )
(BLAST)

001: MREMGTGDSA SRLILWFCLG FLILGVGFVQ CGVTYDRKAL LINGQRRILF SGSIHYPRST PDMWEDLIQK AKDGGIDVIE TYVFWNLHEP SPGKYDFEGR
101: NDLVRFVKTI HKAGLYAHLR IGPYVCAEWN FGGFPVWLKY VPGISFRTDN EPFKRAMKGF TERIVELMKS ENLFESQGGP IILSQIENEY GRQGQLLGAE
201: GHNYMTWAAK MAIATETGVP WVMCKEDDAP DPVINTCNGF YCDSFAPNKP YKPLIWTEAW SGWFTEFGGP MHHRPVQDLA FGVARFIQKG GSFVNYYMYH
301: GGTNFGRTAG GPFVTTSYDY DAPIDEYGLI RQPKYGHLKE LHRAIKMCEK ALVSADPVVT SIGNKQQAHV YSAESGDCSA FLANYDTESA ARVLFNNVHY
401: NLPPWSISIL PDCRNAVFNT AKVGVQTSQM EMLPTDTKNF QWESYLEDLS SLDDSSTFTT HGLLEQINVT RDTSDYLWYM TSVDIGDSES FLHGGELPTL
501: IIQSTGHAVH IFVNGQLSGS AFGTRQNRRF TYQGKINLHS GTNRIALLSV AVGLPNVGGH FESWNTGILG PVALHGLSQG KMDLSWQKWT YQVGLKGEAM
601: NLAFPTNTPS IGWMDASLTV QKPQPLTWHK TYFDAPEGNE PLALDMEGMG KGQIWVNGES IGRYWTAFAT GDCSHCSYTG TYKPNKCQTG CGQPTQRWYH
701: VPRAWLKPSQ NLLVIFEELG GNPSTVSLVK RSVSGVCAEV SEYHPNIKNW QIESYGKGQT FHRPKVHLKC SPGQAIASIK FASFGTPLGT CGSYQQGECH
801: AATSYAILER KCVGKARCAV TISNSNFGKD PCPNVLKRLT VEAVCAPETS VSTWRP

Arabidopsis Description

BGAL3Beta-galactosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV9]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.