Factsheet for Zm00001d048440_P003

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G36360.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92805	Sorghum	vacuole	93.44	96.44
Os03t0165400-01	Rice	vacuole	85.85	88.7
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	91.83	86.93
TraesCS4B01G280900.1	Wheat	golgi, vacuole	83.77	86.15
TraesCS4A01G022500.2	Wheat	golgi, vacuole	83.54	86.02
TraesCS4D01G279400.4	Wheat	vacuole	83.54	85.61
HORVU4Hr1G074280.4	Barley	vacuole	83.08	85.24
GSMUA_Achr4P06620_001	Banana	cytosol	57.77	77.95
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	76.75	76.84
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	74.68	76.08
KRH61101	Soybean	nucleus	60.3	71.2
KRH15132	Soybean	mitochondrion, nucleus	59.95	71.17
KRH76716	Soybean	nucleus	69.39	71.02
VIT_04s0023g02690.t01	Wine grape	extracellular, golgi	69.04	71.01
KRH05876	Soybean	nucleus	59.72	70.9
PGSC0003DMT400079498	Potato	vacuole	59.15	70.7
Solyc01g110000.2.1	Tomato	nucleus	58.92	70.43
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	69.16	70.37
KRH28740	Soybean	nucleus	69.04	70.34
KRH08131	Soybean	nucleus	68.58	70.28
PGSC0003DMT400009496	Potato	nucleus, peroxisome, vacuole	43.27	69.5
KRH69834	Soybean	extracellular, golgi	67.78	69.46
AT1G45130.1	Thale cress	golgi, vacuole	58.46	69.4
VIT_03s0038g00150.t01	Wine grape	vacuole	68.81	69.29
Bra036334.1-P	Field mustard	golgi, vacuole	58.11	69.18
CDY53959	Canola	golgi, vacuole	58.11	69.18
CDY36028	Canola	plastid	56.62	69.1
CDY47949	Canola	golgi, vacuole	58.0	69.04
PGSC0003DMT400009096	Potato	endoplasmic reticulum, golgi, vacuole	67.09	68.99
Solyc02g084720.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	67.09	68.99
Bra014036.1-P	Field mustard	plastid	56.5	68.96
Solyc04g080840.1.1	Tomato	extracellular, golgi	57.77	68.3
Bra011677.1-P	Field mustard	golgi, vacuole	67.2	68.22
CDX69219	Canola	vacuole	64.67	68.2
CDX75569	Canola	golgi, vacuole	64.79	68.08
AT4G36360.1	Thale cress	endoplasmic reticulum, golgi, vacuole	66.51	67.52
CDY59693	Canola	vacuole	66.51	67.52
KRH51779	Soybean	vacuole	55.35	67.46
Zm00001d044290_P005	Maize	golgi, vacuole	61.1	63.98
Zm00001d046357_P001	Maize	extracellular	51.78	62.33
CDY59691	Canola	cytosol, nucleus, vacuole	24.51	60.51
CDY59725	Canola	cytosol	21.52	59.94
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	20.94	59.87
Zm00001d053585_P002	Maize	plastid	50.17	52.59
Zm00001d028474_P002	Maize	vacuole	51.55	49.89
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	47.41	47.58
Zm00001d041880_P001	Maize	extracellular, plasma membrane	48.1	45.53
Zm00001d010212_P002	Maize	endoplasmic reticulum, extracellular, golgi	41.66	44.15
Zm00001d042656_P001	Maize	golgi, vacuole	35.1	43.45
Zm00001d043393_P001	Maize	extracellular	40.39	42.7
Zm00001d053225_P005	Maize	golgi, vacuole	39.13	40.19
Zm00001d032022_P003	Maize	golgi, vacuole	38.9	39.76
Zm00001d006243_P005	Maize	endoplasmic reticulum, golgi, vacuole	34.98	34.9
Zm00001d022621_P005	Maize	vacuole	34.18	33.22

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	EntrezGene:103639582
Gene3D:2.60.120.260	Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	UniProt:A0A1D6PKF8	ProteinID:AQL09739.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301
PFAM:PF02140	PRINTS:PR00742	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF51	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000844152A	EnsemblPlantsGene:Zm00001d048440	EnsemblPlants:Zm00001d048440_P003
EnsemblPlants:Zm00001d048440_T003	SEG:seg	:	:	:	:

Description

Beta-galactosidase 5

Coordinates

chr9:-:156458781..156465887

Molecular Weight (calculated)

95746.5 Da

IEP (calculated)

6.458

GRAVY (calculated)

-0.194

Length

869 amino acids

Sequence
(BLAST)

001: MRRWWPAALL GCAVAVSVLV AAVECAVTYD KKAVLIDGQR RILFSGSIHY PRSTPDMWEG LIQKAKDGGL DVIQTYVFWN GHEPTPGNYY FEERYDLVRF
101: IKTVQKAGLF VHLRIGPYIC GEWNFGGFPV WLKYVPGISF RTDNEPFKTA MQGFTEKIVG MMKSENLFAS QGGPIILSQA SIIFSLDLIE NEYGPEGREF
201: GAAGQAYINW AAKMAVGLGT GVPWVMCKEE DAPDPVVYSI IPVKNDAVVL IIKIINACNG FYCDAFSPNK PYKPTMWTEA WSGWFTEFGG TIRQRPVEDL
301: AFAVARFVQK GGSFINYYMY HGGTNFGRTA GGPFITTSYD YDAPIDEYGL VREPKHSHLK ELHRAVKLCE QALVSVDPAI TTLGTMQEAR VFQSPSGCAA
401: FLANYNSNSY AKVVFNNEQY SLPPWSISIL PDCKNVVFNS ATVGVQTSQM QMWGDGASSM TWERYDEEVD SLAAAPLLTT TGLLEQLNVT RDSSDYLWYI
501: TSVDISSSEN FLQGGGKPLS LSVQSAGHAL HVFVNGQLQG SAYGTREDRR IKYNGNASLR AGTNKIALLS VACGLPNVGV HYETWNTGVG GPVVLHGLDE
601: GSRDLTWQTW SYQVGLKGEQ MNLNSIEGSS SVEWMQGSLI AQNQQPLAWY RAYFETPSGD EPLALDMGSM GKGQIWINGQ SIGRYWTAYA DGDCKECSYT
701: GTFRAPKCQS GCGQPTQRWY HVPKSWLQPT RNLLVVFEEL GGDSSKIALV KRSVSSVCAD VSEDHPNIKN WQIESYGERE YHRAKVHLRC ARGQSISAIK
801: FASFGTPTGT CGDFQQGDCH SANSHTVLEK KCIGLQRCVV AISPESFGGD PCPSVTKRVA VQAVCSPVA

Best Arabidopsis Sequence Match ( AT1G45130.1 )
(BLAST)

001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN

Arabidopsis Description

BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.