CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47949	Canola	golgi, vacuole	99.32	99.32
AT1G45130.1	Thale cress	golgi, vacuole	91.78	91.53
CDY36028	Canola	plastid	87.95	90.17
KRH15132	Soybean	mitochondrion, nucleus	74.25	74.04
KRH05876	Soybean	nucleus	73.56	73.36
PGSC0003DMT400009496	Potato	nucleus, peroxisome, vacuole	52.74	71.16
KRH61101	Soybean	nucleus	71.51	70.92
Solyc04g080840.1.1	Tomato	extracellular, golgi	70.82	70.34
CDX76255	Canola	extracellular	11.64	66.41
KRH51779	Soybean	vacuole	64.66	66.2
CDX88594	Canola	golgi, vacuole	29.45	66.15
VIT_18s0001g13230.t01	Wine grape	extracellular, golgi	73.29	62.65
CDX94367	Canola	mitochondrion	59.73	61.24
CDX95380	Canola	vacuole	60.68	60.94
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	72.19	60.71
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	70.68	60.49
EER92805	Sorghum	vacuole	69.45	60.21
CDY32919	Canola	golgi, vacuole	59.32	59.97
CDY11899	Canola	golgi, vacuole	59.04	59.7
CDX76254	Canola	golgi, nucleus, vacuole	48.08	59.69
Os03t0165400-01	Rice	vacuole	68.77	59.69
CDY20708	Canola	golgi, vacuole	58.9	59.56
CDX92753	Canola	golgi, vacuole	58.08	59.55
CDX98327	Canola	golgi, vacuole	20.41	59.36
CDY42755	Canola	vacuole	57.67	59.13
CDX75569	Canola	golgi, vacuole	66.85	59.01
TraesCS4D01G279400.4	Wheat	vacuole	68.22	58.73
TraesCS4B01G280900.1	Wheat	golgi, vacuole	67.95	58.7
HORVU4Hr1G074280.4	Barley	vacuole	68.08	58.68
TraesCS4A01G022500.2	Wheat	golgi, vacuole	67.81	58.65
CDX69219	Canola	vacuole	66.16	58.62
CDX89360	Canola	mitochondrion	55.75	58.23
Zm00001d048440_P003	Maize	vacuole	69.18	58.11
GSMUA_Achr4P06620_001	Banana	cytosol	51.1	57.92
CDY59693	Canola	vacuole	67.53	57.59
CDY23637	Canola	golgi, vacuole	65.75	57.21
CDX97513	Canola	golgi, vacuole	65.62	57.02
CDY51738	Canola	golgi, vacuole	65.21	56.73
CDY37486	Canola	golgi, vacuole	65.07	56.62
Zm00001d027803_P002	Maize	golgi, plasma membrane, vacuole	69.18	55.01
CDY69471	Canola	cytosol	31.1	54.57
CDY70594	Canola	cytosol	31.1	54.57
CDY59725	Canola	cytosol	22.33	52.24
CDY70160	Canola	vacuole	36.99	49.54
CDX84446	Canola	golgi, vacuole	50.0	49.26
CDY43757	Canola	golgi, vacuole	49.86	49.12
CDY15749	Canola	golgi, vacuole	55.62	48.1
CDY31204	Canola	golgi, vacuole	55.07	47.63
CDX83288	Canola	golgi, vacuole	54.79	47.34
CDY04567	Canola	golgi, vacuole	54.66	46.94
CDY39845	Canola	vacuole	44.79	45.42
CDX84445	Canola	vacuole	44.11	44.72
CDY59691	Canola	cytosol, nucleus, vacuole	21.23	44.03
CDY31349	Canola	vacuole	44.52	43.86
CDY34975	Canola	golgi, plasma membrane, vacuole	47.26	43.78
CDY28339	Canola	vacuole	47.26	43.78
CDX67790	Canola	vacuole	48.77	43.68
CDX93659	Canola	vacuole	48.36	43.15
CDY65885	Canola	vacuole	48.49	43.12
CDY23785	Canola	vacuole	51.1	41.77
CDY19166	Canola	golgi, vacuole	50.68	41.67
CDY43756	Canola	cytosol, nucleus, peroxisome	28.63	40.98
CDY69031	Canola	cytosol, plastid, vacuole	33.29	39.13
CDY32304	Canola	cytosol	46.71	38.66
CDX75479	Canola	vacuole	42.05	36.33
CDX69103	Canola	vacuole	41.92	36.26
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	38.36	35.9
CDY40650	Canola	vacuole	41.1	35.55
CDX72512	Canola	vacuole	40.96	35.43
CDX72747	Canola	vacuole	41.64	34.31
CDX67763	Canola	golgi, plasma membrane, vacuole	35.89	33.98
CDY53917	Canola	plastid	46.99	33.33
CDY22419	Canola	cytosol	41.78	31.9
CDY70118	Canola	cytosol	24.66	30.3
CDY02241	Canola	golgi, vacuole	40.96	30.23
CDX89744	Canola	vacuole	41.23	27.72

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078IX44	UniProt:A0A078IX44	EnsemblPlants:CDY53959	ProteinID:CDY53959
ProteinID:CDY53959.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00011814001	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01301
PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421	PANTHER:PTHR23421:SF51	MetaCyc:PWY-6807	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EC109D	SEG:seg	:

Description

BnaCnng25850DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078IX44]

Coordinates

chrLK033256:-:62270..66486

Molecular Weight (calculated)

81065.8 Da

IEP (calculated)

8.778

GRAVY (calculated)

-0.215

Length

730 amino acids

Sequence
(BLAST)

001: MGTTLVLTKI LCFLLITMVI GSAMIQCSIT YDKKAIVING HRRILLSGSI HYPRSTPEMW EDLIKKAKDG GLDVIDTYVF WNGHEPSPGT YDFKGRYDLV
101: RFIKTVQEVG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGI SFRSDNGPFK AAMQGFTQKI VQMMKEHRFF ASQGGPIILS QIENEFGPEL KALGPAGHSY
201: INWAAKMAVG LDTGVPWVMC KEDDAPDPII NACNGFYCDY FTPNKPYKPK MWTEAWSGWF TEFGGTIPKR PVEDLAFGVT RFIQKGGSYI NYYMYHGGTN
301: FGRTAGGPFI TTSYDYDAPI DEYGLVQEPK YSHLKQLHQA IKQCESALVS SEPKVTKLGN YEEAHVFSAG KGSCVAFLSN YHMNAPAKVV FNNRHYTLPA
401: WSTSILPDCR NVVFNTATVV AKTSQVQMVP SGSILYSVGR YDEDIATYGD RGTITALGLL EQINVTRDTS DYLWYITSVD IKASESFLRG GKWPTLTVDS
501: AGHAVHVFVN GHFYGSAFGT RENRRFSFSA PVNLRGGANR IALLSVAVGL PNVGPHFETW ATGIVGSVAL HGLDGGNKDL SRQKWTYQVG LRGEAMNLIS
601: PSEASSDDWI KGSLAKQNKQ PLTWYKAFFD APRGNEPLAL DLRSMGKGQA WINGQSLGRY WMAFAKGNCG SCNYAGTYRE AKCQSGCGEP TQRWYHVPRS
701: WLKPRGNLIV LFEELGGDVS KVSVVKRSVH

Best Arabidopsis Sequence Match ( AT1G45130.1 )
(BLAST)

001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN

Arabidopsis Description

BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.