Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G13750.1 CDY03088 AT2G01950.1 19000166
AT3G13750.1 CDY17621 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY37486 Canola golgi, vacuole 98.81 98.81
Bra021506.1-P Field mustard vacuole 99.64 97.1
CDX97513 Canola golgi, vacuole 95.95 95.83
CDY23637 Canola golgi, vacuole 95.71 95.71
AT3G13750.1 Thale cress golgi, vacuole 95.11 94.21
VIT_09s0002g02120.t01 Wine grape golgi, vacuole 79.74 79.55
KRH10007 Soybean nucleus 79.14 79.05
KRH44153 Soybean nucleus 78.55 78.17
KRH23324 Soybean vacuole 78.19 78.0
Solyc03g121540.2.1 Tomato nucleus 77.71 77.8
KRH47126 Soybean nucleus 78.31 77.75
PGSC0003DMT400006654 Potato golgi, vacuole 77.12 77.21
PGSC0003DMT400083896 Potato extracellular 76.04 76.41
PGSC0003DMT400012359 Potato golgi, vacuole 76.28 76.19
Solyc06g062580.2.1 Tomato nucleus 76.28 76.1
Solyc12g044880.1.1 Tomato golgi, vacuole 75.45 75.81
GSMUA_Achr7P08970_001 Banana vacuole 63.89 73.42
CDX88594 Canola golgi, vacuole 27.77 71.69
GSMUA_Achr7P08960_001 Banana endoplasmic reticulum, golgi, vacuole 62.57 71.33
GSMUA_Achr6P00880_001 Banana golgi, vacuole 62.1 70.98
GSMUA_Achr7P08940_001 Banana vacuole 61.74 70.77
CDX94367 Canola mitochondrion 59.48 70.08
GSMUA_Achr7P08950_001 Banana golgi, vacuole 61.38 69.97
GSMUA_Achr6P35850_001 Banana golgi, vacuole 68.18 69.42
OQU87043 Sorghum golgi, vacuole 68.06 69.04
Os01t0580200-01 Rice golgi, vacuole 67.7 68.68
Zm00001d044290_P005 Maize golgi, vacuole 67.58 68.31
TraesCS3A01G208600.1 Wheat plastid 67.46 67.78
TraesCS3D01G211500.2 Wheat golgi, vacuole 67.22 67.54
HORVU3Hr1G050450.12 Barley golgi, vacuole 66.63 67.27
Zm00001d046357_P001 Maize extracellular 57.81 67.17
TraesCS3B01G235100.1 Wheat golgi, vacuole 66.98 67.14
TraesCS6A01G185400.1 Wheat golgi, vacuole 57.93 67.13
CDX89360 Canola mitochondrion 55.9 67.1
TraesCS7D01G359500.1 Wheat golgi 57.21 66.95
CDX92753 Canola golgi, vacuole 56.73 66.85
TraesCS7B01G264200.1 Wheat plasma membrane, vacuole 57.21 66.85
TraesCS6D01G172400.1 Wheat golgi, vacuole 57.69 66.76
CDX76254 Canola golgi, nucleus, vacuole 46.72 66.67
TraesCS6B01G214100.1 Wheat golgi, vacuole 57.57 66.62
EER88554 Sorghum golgi, vacuole 57.57 66.62
CDX95380 Canola vacuole 57.69 66.58
CDX76255 Canola extracellular 10.13 66.41
TraesCS7A01G363600.1 Wheat plasma membrane, vacuole 56.62 66.16
Os06t0573600-01 Rice plasma membrane, vacuole 56.26 66.01
Os02t0219200-01 Rice peroxisome, vacuole 39.33 66.0
CDY11899 Canola golgi, vacuole 56.73 65.93
CDY42755 Canola vacuole 55.9 65.87
CDY47949 Canola golgi, vacuole 56.85 65.34
CDY53959 Canola golgi, vacuole 56.73 65.21
CDY36028 Canola plastid 55.3 65.17
EES06516 Sorghum mitochondrion, plastid 57.45 65.14
CDY32919 Canola golgi, vacuole 55.78 64.82
HORVU7Hr1G086690.2 Barley plasma membrane, vacuole 57.21 64.26
HORVU6Hr1G039490.6 Barley plastid 58.28 64.01
CDY20708 Canola golgi, vacuole 55.07 63.99
CDX75569 Canola golgi, vacuole 61.5 62.39
CDY70594 Canola cytosol 30.87 62.26
CDX69219 Canola vacuole 61.14 62.26
CDY59693 Canola vacuole 63.17 61.92
CDY69471 Canola cytosol 30.51 61.54
GSMUA_Achr2P16780_001 Banana plastid 61.38 61.24
CDX98327 Canola golgi, vacuole 18.12 60.56
Zm00001d053585_P002 Maize plastid 56.02 56.69
CDY15749 Canola golgi, vacuole 55.18 54.86
CDY04567 Canola golgi, vacuole 54.95 54.24
CDY31204 Canola golgi, vacuole 54.47 54.15
CDY59691 Canola cytosol, nucleus, vacuole 22.53 53.69
CDX83288 Canola golgi, vacuole 53.99 53.61
CDY59725 Canola cytosol 19.79 53.21
CDY43757 Canola golgi, vacuole 46.25 52.36
CDX84446 Canola golgi, vacuole 46.01 52.09
CDY70160 Canola vacuole 33.49 51.56
CDY65885 Canola vacuole 48.03 49.09
CDY34975 Canola golgi, plasma membrane, vacuole 46.01 48.98
CDY28339 Canola vacuole 46.01 48.98
CDX67790 Canola vacuole 47.32 48.71
CDY39845 Canola vacuole 41.72 48.61
CDY23785 Canola vacuole 51.49 48.38
CDY19166 Canola golgi, vacuole 51.13 48.31
CDX93659 Canola vacuole 46.48 47.68
CDX84445 Canola vacuole 40.76 47.5
CDY31349 Canola vacuole 41.72 47.23
CDY69031 Canola cytosol, plastid, vacuole 33.37 45.09
CDY43756 Canola cytosol, nucleus, peroxisome 27.29 44.9
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 40.64 43.72
CDY40650 Canola vacuole 42.67 42.42
CDX75479 Canola vacuole 42.67 42.37
CDX72512 Canola vacuole 42.55 42.3
CDY32304 Canola cytosol 44.46 42.29
CDX69103 Canola vacuole 42.31 42.06
CDY70118 Canola cytosol 28.49 40.24
CDX72747 Canola vacuole 41.0 38.83
CDY53917 Canola plastid 45.77 37.32
CDY22419 Canola cytosol 41.6 36.51
CDY02241 Canola golgi, vacuole 42.31 35.89
CDX67763 Canola golgi, plasma membrane, vacuole 32.42 35.28
CDX89744 Canola vacuole 42.55 32.87
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
Gene3D:2.60.120.740MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078IRL6UniProt:A0A078IRL6EnsemblPlants:CDY51738
ProteinID:CDY51738ProteinID:CDY51738.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798
GO:GO:0030246EnsemblPlantsGene:GSBRNA2T00004100001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SFInterPro:IPR000922InterPro:IPR008979InterPro:Lectin_gal-bd_domPFAM:PF01301PFAM:PF02140
PRINTS:PR00742ScanProsite:PS01182PFscan:PS50228PANTHER:PTHR23421PANTHER:PTHR23421:SF74MetaCyc:PWY-6807
SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF4407SEG:seg
Description
BnaA01g37210DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078IRL6]
Coordinates
chrLK033023:+:48834..53767
Molecular Weight (calculated)
93034.1 Da
IEP (calculated)
9.127
GRAVY (calculated)
-0.263
Length
839 amino acids
Sequence
(BLAST)
001: MKNVAMAAAS ALFLLGFLVS LVSASVSYDS RAITINGKRR ILISGSIHYP RSTPEMWPDL IRKAKEGGLD VIQTYVFWNG HEPSPGKYYF EGNYDLVKFV
101: KLVKQSGLYL HLRIGPYVCA EWNFGGFPVW LKYVPGISFR TDNGPFKAQM QRFTTKIVNM MKAERLFESQ GGPIILSQIE NEYGPMEYEL GAPGRSYTNW
201: AAKMAVGLGT GVPWVMCKQD DAPDPIINAC NGFYCDYFSP NKAYKPKMWT EAWTGWFTKF GGPVPYRPAE DMAFSVARFI QKGGSFINYY MFHGGTNFGR
301: TAGGPFIATS YDYDAPLDEY GLERQPKWGH LKDLHRAIKL CEPALVSGQL TRIPLGNYQE AHQYKSKSGA CSAFLANYNQ RSYAKVTFGK NHYNLPPWSI
401: SILPDCKNTV YNTARVGAQT SRMKMVRVPV HGGLSWQAYN EDPSSYVDES FTMVGLLEQI NTTRDTSDYL WYMTDVKINS NEGFLRGGNL PTLTILSAGH
501: AMHVFINGQL SGSAYGSLDS PKLTFRRGVN LRAGFNKIAI LSIAVGLPNV GPHFETWNAG VLGPVSLNGL NGGRRDLSWQ KWTYKVGLRG ESLSLHSLSG
601: SSSVEWAEGA FVAQKQPLTW YKTTFSAPAG DSPLAVDMGS MGKGQIWING QSVGRHWPAY KAVGTCRECS YIGTFNENKC LRNCGEASQR WYHVPRSWLK
701: PTGNLLVVFE EWGGDPNGIS LVRREVDTVC ADIYEWQSTL VNYQLHASGK VNKPLHPKVH LQCGPGQKIT TVKFASFGTP QGTCGSYRQG SCHAHHSYDA
801: FNRLCVGQNW CSVTVAPAMF GGDPCPNVMK KLAVEAVCA
Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)
001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA
Arabidopsis Description
BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.