Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- plastid 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS3A01G099400.1 | |
| TraesCS3B01G115800.1 | |
| TraesCS3D01G099700.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13750.1 | TraesCS3A01G099400.1 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | TraesCS3B01G115800.1 | AT2G01950.1 | 19000166 |
| AT3G13750.1 | TraesCS3D01G099700.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G214100.1 | Wheat | golgi, vacuole | 98.34 | 98.21 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 96.82 | 96.69 |
| HORVU6Hr1G039490.6 | Barley | plastid | 96.69 | 91.62 |
| Os02t0219200-01 | Rice | peroxisome, vacuole | 61.05 | 88.4 |
| EES06516 | Sorghum | mitochondrion, plastid | 87.85 | 85.95 |
| TraesCS7A01G363600.1 | Wheat | plasma membrane, vacuole | 81.22 | 81.89 |
| Zm00001d053585_P002 | Maize | plastid | 85.5 | 74.67 |
| GSMUA_Achr7P08970_001 | Banana | vacuole | 72.51 | 71.92 |
| GSMUA_Achr6P00880_001 | Banana | golgi, vacuole | 72.1 | 71.12 |
| GSMUA_Achr7P08960_001 | Banana | endoplasmic reticulum, golgi, vacuole | 71.41 | 70.24 |
| GSMUA_Achr7P08950_001 | Banana | golgi, vacuole | 70.99 | 69.84 |
| GSMUA_Achr7P08940_001 | Banana | vacuole | 70.44 | 69.67 |
| CDX76255 | Canola | extracellular | 12.29 | 69.53 |
| CDX88594 | Canola | golgi, vacuole | 31.08 | 69.23 |
| PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 61.46 | 66.42 |
| KRH37385 | Soybean | nucleus | 65.47 | 65.74 |
| Solyc12g008840.1.1 | Tomato | extracellular | 65.61 | 65.61 |
| KRH12385 | Soybean | vacuole | 65.33 | 65.6 |
| Bra019644.1-P | Field mustard | golgi, plastid, vacuole | 63.4 | 64.47 |
| CDX94367 | Canola | mitochondrion | 63.12 | 64.19 |
| CDX95380 | Canola | vacuole | 63.95 | 63.69 |
| GSMUA_Achr2P16780_001 | Banana | plastid | 72.93 | 62.78 |
| AT5G56870.1 | Thale cress | vacuole | 62.71 | 62.71 |
| Bra013956.1-P | Field mustard | cytosol, mitochondrion, plastid, vacuole | 63.12 | 62.43 |
| CDY11899 | Canola | golgi, vacuole | 62.15 | 62.33 |
| Bra006850.1-P | Field mustard | golgi, vacuole | 62.02 | 62.19 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 50.28 | 61.9 |
| CDX89360 | Canola | mitochondrion | 59.53 | 61.66 |
| CDX92753 | Canola | golgi, vacuole | 60.22 | 61.24 |
| CDY32919 | Canola | golgi, vacuole | 60.91 | 61.08 |
| Bra035634.1-P | Field mustard | golgi, vacuole | 60.77 | 60.94 |
| CDY42755 | Canola | vacuole | 59.81 | 60.81 |
| CDY20708 | Canola | golgi, vacuole | 60.64 | 60.8 |
| Bra019120.1-P | Field mustard | golgi, vacuole | 59.67 | 60.67 |
| AT4G26140.7 | Thale cress | vacuole | 62.71 | 60.29 |
| Bra027403.1-P | Field mustard | golgi, vacuole | 67.82 | 58.52 |
| AT3G52840.2 | Thale cress | golgi, vacuole | 63.12 | 58.51 |
| TraesCS3A01G208600.1 | Wheat | plastid | 67.4 | 58.44 |
| CDY23637 | Canola | golgi, vacuole | 67.68 | 58.4 |
| CDX97513 | Canola | golgi, vacuole | 67.68 | 58.33 |
| VIT_09s0002g02120.t01 | Wine grape | golgi, vacuole | 67.54 | 58.15 |
| CDY51738 | Canola | golgi, vacuole | 67.13 | 57.93 |
| AT3G13750.1 | Thale cress | golgi, vacuole | 67.68 | 57.85 |
| CDY37486 | Canola | golgi, vacuole | 66.99 | 57.81 |
| KRH44153 | Soybean | nucleus | 67.27 | 57.77 |
| KRH10007 | Soybean | nucleus | 66.85 | 57.62 |
| KRH47126 | Soybean | nucleus | 66.99 | 57.4 |
| CDY70594 | Canola | cytosol | 32.87 | 57.21 |
| CDY69471 | Canola | cytosol | 32.87 | 57.21 |
| KRH23324 | Soybean | vacuole | 66.44 | 57.19 |
| Solyc03g121540.2.1 | Tomato | nucleus | 65.61 | 56.68 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 65.47 | 56.56 |
| Bra021506.1-P | Field mustard | vacuole | 67.27 | 56.56 |
| PGSC0003DMT400083896 | Potato | extracellular | 65.06 | 56.41 |
| Solyc06g062580.2.1 | Tomato | nucleus | 65.47 | 56.36 |
| Solyc12g044880.1.1 | Tomato | golgi, vacuole | 64.92 | 56.29 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 65.19 | 56.19 |
| KRH02714 | Soybean | golgi, vacuole | 64.64 | 55.78 |
| KRH19154 | Soybean | golgi, mitochondrion, plastid, vacuole | 64.64 | 55.78 |
| VIT_11s0016g02200.t01 | Wine grape | vacuole | 63.67 | 55.14 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 61.05 | 52.37 |
| TraesCS4A01G083700.3 | Wheat | extracellular | 54.97 | 46.66 |
| PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 27.07 | 43.85 |
| TraesCS3A01G386300.1 | Wheat | golgi, vacuole | 50.55 | 43.52 |
| TraesCS3A01G386200.1 | Wheat | vacuole | 50.41 | 43.25 |
| TraesCS5A01G143600.4 | Wheat | plasma membrane | 51.93 | 41.27 |
| TraesCS1A01G024100.1 | Wheat | vacuole | 46.41 | 40.58 |
| TraesCS1A01G267700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.17 | 39.68 |
| TraesCS3A01G386100.3 | Wheat | vacuole | 43.78 | 38.15 |
| TraesCS7A01G272400.2 | Wheat | vacuole | 43.37 | 36.81 |
| TraesCS5A01G330900.1 | Wheat | endoplasmic reticulum, vacuole | 40.33 | 34.8 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS |
| InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR008979 | PFAM:PF01301 | PRINTS:PR00742 | ScanProsite:PS01182 |
| PANTHER:PTHR23421 | PANTHER:PTHR23421:SF70 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6A01G185400 | EnsemblPlants:TraesCS6A01G185400.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:-:217264592..217269058
Molecular Weight (calculated)
80162.4 Da
IEP (calculated)
9.363
GRAVY (calculated)
-0.303
Length
724 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPPLVAGGG LLLAAFVAFS LAASSANAAV SYDHRSLLIN GRRRILISGS IHYPRSTPEM WPGLIQKAKD GGLDVIQTYV FWNGHEPVKG QYYFSDRYDL
101: VRFVKLAKQA GLYVHLRIGP YVCAEWNFGG FPVWLKYVPG ISFRTDNGPF KAEMQRFVEK IVSMMKSERL FEWQGGPIIM SQVENEFGPM ESVGGSGAKP
201: YANWAAKMAV ATNTGVPWVM CKQEDAPDPV INTCNGFYCD YFTPNKKNKP TMWTEAWTGW FTSFGGAVPH RPVEDMAFAV ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP IDEYGLLRQP KWGHLRDLHK AIKQAEPVLV SGDPTVQSLG NYEKAYVFKS KNGACAAFLS NYHMNAAVKV RFNGRHYDLP
401: AWSISILPDC KTAVFNTATV KEPTLLPKMH PVVRFAWQSY SEDTNSLDGS AFTKNGLVEQ LSMTWDKSDY LWYTTYVNIG ANELAKNGQW PQLTIYSAGH
501: SMQVFVNGKS YGSVYGGYNN PKLTYDGHVK MWQGSNKISI LSSAVGLPND GNHFERWNVG VLGPVTVSGL NSGKRDLSHQ KWTYQVGLKG ESLGLHTVAG
601: SSSVEWGGPG NKQPLTWHKA LFTAPVGSDP VALDMGSMGK GQMWVNGHHV GRYWSYKAPS GGCGRCSYAG TYRQDKCRSN CGELSQRWYH VPRSWLKPGG
701: NLLVVLEEYG GDLTGVAMAT RRTT
101: VRFVKLAKQA GLYVHLRIGP YVCAEWNFGG FPVWLKYVPG ISFRTDNGPF KAEMQRFVEK IVSMMKSERL FEWQGGPIIM SQVENEFGPM ESVGGSGAKP
201: YANWAAKMAV ATNTGVPWVM CKQEDAPDPV INTCNGFYCD YFTPNKKNKP TMWTEAWTGW FTSFGGAVPH RPVEDMAFAV ARFIQKGGSF VNYYMYHGGT
301: NFGRTAGGPF IATSYDYDAP IDEYGLLRQP KWGHLRDLHK AIKQAEPVLV SGDPTVQSLG NYEKAYVFKS KNGACAAFLS NYHMNAAVKV RFNGRHYDLP
401: AWSISILPDC KTAVFNTATV KEPTLLPKMH PVVRFAWQSY SEDTNSLDGS AFTKNGLVEQ LSMTWDKSDY LWYTTYVNIG ANELAKNGQW PQLTIYSAGH
501: SMQVFVNGKS YGSVYGGYNN PKLTYDGHVK MWQGSNKISI LSSAVGLPND GNHFERWNVG VLGPVTVSGL NSGKRDLSHQ KWTYQVGLKG ESLGLHTVAG
601: SSSVEWGGPG NKQPLTWHKA LFTAPVGSDP VALDMGSMGK GQMWVNGHHV GRYWSYKAPS GGCGRCSYAG TYRQDKCRSN CGELSQRWYH VPRSWLKPGG
701: NLLVVLEEYG GDLTGVAMAT RRTT
001: MYSDISVSLY IYVHIASRFS FIPITELIIS AEYLLFFIKK QKNIERFGFS KNVKMSMHFR NKAWIILAIL CFSSLIHSTE AVVTYDHKAL IINGQRRILI
101: SGSIHYPRST PEMWPDLIKK AKEGGLDVIQ TYVFWNGHEP SPGNYYFQDR YDLVKFTKLV HQAGLYLDLR IGPYVCAEWN FGGFPVWLKY VPGMVFRTDN
201: EPFKIAMQKF TKKIVDMMKE EKLFETQGGP IILSQIENEY GPMQWEMGAA GKAYSKWTAE MALGLSTGVP WIMCKQEDAP YPIIDTCNGF YCEGFKPNSD
301: NKPKLWTENW TGWFTEFGGA IPNRPVEDIA FSVARFIQNG GSFMNYYMYY GGTNFDRTAG VFIATSYDYD APIDEYGLLR EPKYSHLKEL HKVIKLCEPA
401: LVSVDPTITS LGDKQEIHVF KSKTSCAAFL SNYDTSSAAR VMFRGFPYDL PPWSVSILPD CKTEYYNTAK IRAPTILMKM IPTSTKFSWE SYNEGSPSSN
501: EAGTFVKDGL VEQISMTRDK TDYFWYFTDI TIGSDESFLK TGDNPLLTIF SAGHALHVFV NGLLAGTSYG ALSNSKLTFS QNIKLSVGIN KLALLSTAVG
601: LPNAGVHYET WNTGILGPVT LKGVNSGTWD MSKWKWSYKI GLRGEAMSLH TLAGSSAVKW WIKGFVVKKQ PLTWYKSSFD TPRGNEPLAL DMNTMGKGQV
701: WVNGHNIGRH WPAYTARGNC GRCNYAGIYN EKKCLSHCGE PSQRWYHVPR SWLKPFGNLL VIFEEWGGDP SGISLVKRTA K
101: SGSIHYPRST PEMWPDLIKK AKEGGLDVIQ TYVFWNGHEP SPGNYYFQDR YDLVKFTKLV HQAGLYLDLR IGPYVCAEWN FGGFPVWLKY VPGMVFRTDN
201: EPFKIAMQKF TKKIVDMMKE EKLFETQGGP IILSQIENEY GPMQWEMGAA GKAYSKWTAE MALGLSTGVP WIMCKQEDAP YPIIDTCNGF YCEGFKPNSD
301: NKPKLWTENW TGWFTEFGGA IPNRPVEDIA FSVARFIQNG GSFMNYYMYY GGTNFDRTAG VFIATSYDYD APIDEYGLLR EPKYSHLKEL HKVIKLCEPA
401: LVSVDPTITS LGDKQEIHVF KSKTSCAAFL SNYDTSSAAR VMFRGFPYDL PPWSVSILPD CKTEYYNTAK IRAPTILMKM IPTSTKFSWE SYNEGSPSSN
501: EAGTFVKDGL VEQISMTRDK TDYFWYFTDI TIGSDESFLK TGDNPLLTIF SAGHALHVFV NGLLAGTSYG ALSNSKLTFS QNIKLSVGIN KLALLSTAVG
601: LPNAGVHYET WNTGILGPVT LKGVNSGTWD MSKWKWSYKI GLRGEAMSLH TLAGSSAVKW WIKGFVVKKQ PLTWYKSSFD TPRGNEPLAL DMNTMGKGQV
701: WVNGHNIGRH WPAYTARGNC GRCNYAGIYN EKKCLSHCGE PSQRWYHVPR SWLKPFGNLL VIFEEWGGDP SGISLVKRTA K
Arabidopsis Description
BGAL2Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM56]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.