Factsheet for Bra013956.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, vacuole, cytosol

Predictor Summary:

plastid 2
golgi 1
mitochondrion 3
vacuole 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89360	Canola	mitochondrion	90.44	94.71
Bra019120.1-P	Field mustard	golgi, vacuole	84.02	86.38
AT4G26140.7	Thale cress	vacuole	87.7	85.26
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	77.6	79.78
Bra006850.1-P	Field mustard	golgi, vacuole	78.55	79.64
Bra035634.1-P	Field mustard	golgi, vacuole	75.82	76.87
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	64.21	70.15
KRH12385	Soybean	vacuole	68.72	69.76
KRH37385	Soybean	nucleus	68.44	69.49
Solyc12g008840.1.1	Tomato	extracellular	67.08	67.82
GSMUA_Achr7P08970_001	Banana	vacuole	66.94	67.12
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	66.12	65.94
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	65.98	65.62
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	65.98	65.62
Os06t0573600-01	Rice	plasma membrane, vacuole	64.07	65.59
GSMUA_Achr7P08940_001	Banana	vacuole	65.16	65.16
TraesCS7D01G359500.1	Wheat	golgi	63.52	64.85
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	63.52	64.76
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	63.39	64.62
Zm00001d046357_P001	Maize	extracellular	63.52	64.4
EER88554	Sorghum	golgi, vacuole	63.66	64.28
TraesCS6A01G185400.1	Wheat	golgi, vacuole	62.43	63.12
TraesCS6D01G172400.1	Wheat	golgi, vacuole	62.3	62.9
TraesCS6B01G214100.1	Wheat	golgi, vacuole	62.16	62.76
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	63.39	62.12
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	70.49	61.5
EES06516	Sorghum	mitochondrion, plastid	62.16	61.49
KRH02714	Soybean	golgi, vacuole	70.22	61.26
Bra014036.1-P	Field mustard	plastid	59.15	60.81
Os02t0219200-01	Rice	peroxisome, vacuole	41.53	60.8
Bra027403.1-P	Field mustard	golgi, vacuole	69.67	60.79
VIT_11s0016g02200.t01	Wine grape	vacuole	68.72	60.17
HORVU6Hr1G039490.6	Barley	plastid	62.7	60.08
Bra036334.1-P	Field mustard	golgi, vacuole	59.29	59.45
Bra021506.1-P	Field mustard	vacuole	68.85	58.54
Zm00001d044290_P005	Maize	golgi, vacuole	65.03	57.35
OQU87043	Sorghum	golgi, vacuole	64.62	57.19
GSMUA_Achr2P16780_001	Banana	plastid	65.71	57.19
Os01t0580200-01	Rice	golgi, vacuole	64.48	57.07
TraesCS3D01G211500.2	Wheat	golgi, vacuole	64.34	56.41
HORVU3Hr1G050450.12	Barley	golgi, vacuole	63.93	56.32
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	63.25	56.19
TraesCS3A01G208600.1	Wheat	plastid	64.07	56.17
TraesCS3B01G235100.1	Wheat	golgi, vacuole	63.66	55.67
Zm00001d053585_P002	Maize	plastid	62.02	54.76
Bra011677.1-P	Field mustard	golgi, vacuole	60.25	51.52
Bra024238.1-P	Field mustard	golgi, vacuole	51.09	50.47
Bra011946.1-P	Field mustard	golgi, vacuole	54.78	47.46
Bra000493.1-P	Field mustard	golgi, vacuole	54.51	47.27
Bra024237.1-P	Field mustard	vacuole	32.1	46.91
Bra029200.1-P	Field mustard	vacuole	45.77	46.53
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	28.28	46.31
Bra021814.1-P	Field mustard	plastid	51.23	41.99
Bra002325.1-P	Field mustard	golgi, vacuole	47.4	41.86
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	17.21	41.45
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	39.07	39.07
Bra003128.1-P	Field mustard	extracellular, vacuole	35.25	36.49
Bra001991.1-P	Field mustard	golgi, vacuole	40.16	36.21
Bra011577.1-P	Field mustard	vacuole	41.67	36.09
Bra017687.1-P	Field mustard	vacuole	40.85	35.43
Bra013052.1-P	Field mustard	golgi, vacuole	40.85	35.34
Bra033571.1-P	Field mustard	cytosol	41.94	32.11

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra013956	EnsemblPlants:Bra013956.1	EnsemblPlants:Bra013956.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	UniProt:M4DBU6	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182
PANTHER:PTHR23421	PANTHER:PTHR23421:SF63	SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0002546DC7	:

Description

AT4G26140 (E=0.0) BGAL12 | BGAL12 (beta-galactosidase 12); beta-galactosidase/ catalytic/ cation binding

Coordinates

chrA01:-:8681810..8686073

Molecular Weight (calculated)

81729.0 Da

IEP (calculated)

7.886

GRAVY (calculated)

-0.362

Length

732 amino acids

Sequence
(BLAST)

001: MVTYDHKAVT INGQRRILLS GSIHYPRSTP EMWPDLIQKA KDGGLDVIQT YVFWNGHEPS PGQYYFEDRY DLVKFVKLVQ QAGLYVHIRI GPSKFVKLVQ
101: QDGLYVHIRI GPYVCAEWNF GGFPVWLKYV PGMAFRTDNE PFKAAMQKFT EKIVGMMKEE KLFETQGGPI ILSQIENEYG PIEWEIGAPG KAYTKWAAQM
201: AEGLSTGVPW IMCKQDDAPD SIINTCNGYY CENFKPNSDN KPKMWTENWT GWFTEFGGAV PYRPAEDIAF SVARFIQNGG SFINYYMYHG GTNFDRTAGE
301: FMATSYDYDA PLDEYGLPRE PKYSHLTKLH KVIKLCEPAL VSVDPTVTSL GDKQEAHVFK SKSSCAAFLS NYNSSSAARV SFGGSTYDLP PWSVSILPNC
401: KTEYYNTAKV QVRAPSIHMK MVPTDTQLSW GSYSEEIPSP NYNGTFAKDG LVEQISITRD KTDYFWYLTD ITISADEKFL KTGEDPLLTI GSAGHALSVF
501: VNGQLAGTAY GSLEKPKLTF SQKIKLAAGV NKLALLSIAV GLPNVGLHYE TRNSGVLGPV TLEGVNSGTW DMSKWKWSYK IGTKGEALSI HTVTGSSTVE
601: WKEGPLVAKK QPLTWYKSTF ETPAGNEPLA LDMNTMGKGQ VWINGQNIGR HWPAYKARGK CERCSYAGTF NENKCLSNCG EASQRWYHVP RSWLKPSANL
701: IVVLEEWGGD PNGISLVRRT SKKIASESIF SG

Best Arabidopsis Sequence Match ( AT4G26140.1 )
(BLAST)

001: MGLNFREKAW ILLGILCCSS LICSVKAIVT YDRKAVIING QRRILLSGSI HYPRSTPEMW PDLIQKAKDG GLDVIQTYVF WNGHEPSPGQ YYFEDRYDLV
101: KFIKVVQQAG LYVHLRIGPY VCAEWNFGGF PVWLKYVPGM VFRTDNEPFK AAMQKFTEKI VRMMKEEKLF ETQGGPIILS QIENEYGPIE WEIGAPGKAY
201: TKWVAEMAQG LSTGVPWIMC KQDDAPNSII NTCNGFYCEN FKPNSDNKPK MWTENWTGWF TEFGGAVPYR PAEDIALSVA RFIQNGGSFI NYYMYHGGTN
301: FDRTAGEFIA TSYDYDAPLD EYGLPREPKY SHLKRLHKVI KLCEPALVSA DPTVTSLGDK QEAHVFKSKS SCAAFLSNYN TSSAARVLFG GSTYDLPPWS
401: VSILPDCKTE YYNTAKVQVR TSSIHMKMVP TNTPFSWGSY NEEIPSANDN GTFSQDGLVE QISITRDKTD YFWYLTDITI SPDEKFLTGE DPLLTIGSAG
501: HALHVFVNGQ LAGTAYGSLE KPKLTFSQKI KLHAGVNKLA LLSTAAGLPN VGVHYETWNT GVLGPVTLNG VNSGTWDMTK WKWSYKIGTK GEALSVHTLA
601: GSSTVEWKEG SLVAKKQPLT WYKSTFDSPT GNEPLALDMN TMGKGQMWIN GQNIGRHWPA YTARGKCERC SYAGTFTEKK CLSNCGEASQ RWYHVPRSWL
701: KPTNNLVIVL EEWGGEPNGI SLVKRTAK

Arabidopsis Description

BGAL12beta-galactosidase 12 [Source:TAIR;Acc:AT4G26140]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.