Factsheet for Bra006850.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
golgi 6
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69471	Canola	cytosol	56.93	98.8
CDY11899	Canola	golgi, vacuole	98.61	98.61
CDY70594	Canola	cytosol	56.37	97.84
AT5G56870.1	Thale cress	vacuole	91.83	91.57
Bra035634.1-P	Field mustard	golgi, vacuole	90.86	90.86
Bra019120.1-P	Field mustard	golgi, vacuole	78.95	80.06
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	77.84	78.93
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	79.64	78.55
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	64.54	69.55
KRH37385	Soybean	nucleus	69.39	69.49
KRH12385	Soybean	vacuole	68.7	68.79
Solyc12g008840.1.1	Tomato	extracellular	68.56	68.37
GSMUA_Achr7P08970_001	Banana	vacuole	66.2	65.48
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	66.2	65.12
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	65.79	64.54
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	65.1	63.86
GSMUA_Achr7P08940_001	Banana	vacuole	64.54	63.66
Os06t0573600-01	Rice	plasma membrane, vacuole	62.47	63.08
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	62.47	62.81
Zm00001d046357_P001	Maize	extracellular	62.6	62.6
EER88554	Sorghum	golgi, vacuole	62.74	62.48
TraesCS7D01G359500.1	Wheat	golgi	62.05	62.48
TraesCS6A01G185400.1	Wheat	golgi, vacuole	62.19	62.02
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	61.63	61.98
TraesCS6D01G172400.1	Wheat	golgi, vacuole	61.77	61.52
TraesCS6B01G214100.1	Wheat	golgi, vacuole	61.63	61.38
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	62.6	60.51
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	69.94	60.19
KRH02714	Soybean	golgi, vacuole	69.39	59.71
EES06516	Sorghum	mitochondrion, plastid	61.08	59.59
Bra014036.1-P	Field mustard	plastid	58.59	59.41
Os02t0219200-01	Rice	peroxisome, vacuole	40.86	59.0
VIT_11s0016g02200.t01	Wine grape	vacuole	68.28	58.97
Bra036334.1-P	Field mustard	golgi, vacuole	59.42	58.77
HORVU6Hr1G039490.6	Barley	plastid	61.91	58.51
GSMUA_Achr2P16780_001	Banana	plastid	66.76	57.31
Bra027403.1-P	Field mustard	golgi, vacuole	66.48	57.21
Os01t0580200-01	Rice	golgi, vacuole	63.85	55.74
OQU87043	Sorghum	golgi, vacuole	63.71	55.62
Zm00001d044290_P005	Maize	golgi, vacuole	63.57	55.3
Bra021506.1-P	Field mustard	vacuole	65.79	55.17
HORVU3Hr1G050450.12	Barley	golgi, vacuole	63.43	55.11
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	62.74	54.98
TraesCS3A01G208600.1	Wheat	plastid	63.43	54.85
TraesCS3D01G211500.2	Wheat	golgi, vacuole	63.16	54.61
TraesCS3B01G235100.1	Wheat	golgi, vacuole	63.02	54.36
Zm00001d053585_P002	Maize	plastid	61.22	53.32
Bra011677.1-P	Field mustard	golgi, vacuole	60.66	51.17
Bra024238.1-P	Field mustard	golgi, vacuole	51.66	50.34
Bra024237.1-P	Field mustard	vacuole	32.96	47.51
Bra029200.1-P	Field mustard	vacuole	47.23	47.36
Bra000493.1-P	Field mustard	golgi, vacuole	54.43	46.56
Bra011946.1-P	Field mustard	golgi, vacuole	54.43	46.51
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	27.98	45.19
Bra002325.1-P	Field mustard	golgi, vacuole	48.75	42.46
Bra017756.1-P	Field mustard	cytosol, nucleus, vacuole	17.73	42.11
Bra021814.1-P	Field mustard	plastid	51.52	41.66
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	40.3	39.75
Bra003128.1-P	Field mustard	extracellular, vacuole	36.43	37.2
Bra001991.1-P	Field mustard	golgi, vacuole	41.55	36.95
Bra011577.1-P	Field mustard	vacuole	43.21	36.92
Bra013052.1-P	Field mustard	golgi, vacuole	42.11	35.93
Bra017687.1-P	Field mustard	vacuole	41.55	35.55
Bra033571.1-P	Field mustard	cytosol	41.55	31.38

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra006850	EnsemblPlants:Bra006850.1	EnsemblPlants:Bra006850.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	UniProt:M4CRK9	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182
PANTHER:PTHR23421	PANTHER:PTHR23421:SF63	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI000253FD1A	:	:	:	:	:

Description

AT5G56870 (E=0.0) BGAL4 | BGAL4 (beta-galactosidase 4); beta-galactosidase

Coordinates

chrA03:-:5333029..5337064

Molecular Weight (calculated)

81039.5 Da

IEP (calculated)

9.054

GRAVY (calculated)

-0.304

Length

722 amino acids

Sequence
(BLAST)

001: MGSNFRDKAW IFLAILCYSS LICSVKATVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGN YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPSPII DTCNGYYCEN FKPNSNNKPK MWTENWTGWY TEFGGAVPYR PVEDIAYSVA RFIQNGGSFV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLTREPKY SHLKALHKVI KLSEPALVSA DATVTYLGAK QEAHVFWSKS SCAAFLSNND ANSAARVMFR GFPYDLPPWS
401: VSILPDCKTE YYNTAKVNAP RVHRNMVPTG TRFSWESFNE ATPSANERDT FARNGLVEQI SMTWDKSDYF WYLTDITVGA GERFLKTGDY PLLTIWSAGH
501: ALHVFVNGQL AGSAYGGLSH PKLTFSQKIK LHAGVNKLAL LSVAVGLPNV GQHFETWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EAMSLHTDSS
601: SVSWNQGSYV IKKQPLTWYK STFAAPGGNE PLAIDMNTMG KGHVWINGRN IGRHWPAYKA QGNCGRCNYA GTFDAKKCLS NCGEASQRWY HVPRSWLKSQ
701: NLIVVFEEWG GDPSGISLVK RT

Best Arabidopsis Sequence Match ( AT5G56870.1 )
(BLAST)

001: MVLNFRDKSC IFLAILCCLS LSCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPGPII DTCNGYYCED FKPNSINKPK MWTENWTGWY TDFGGAVPYR PVEDIAYSVA RFIQKGGSLV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKAI KLSEPALLSA DATVTSLGAK QEAYVFWSKS SCAAFLSNKD ENSAARVLFR GFPYDLPPWS
401: VSILPDCKTE VYNTAKVNAP SVHRNMVPTG TKFSWGSFNE ATPTANEAGT FARNGLVEQI SMTWDKSDYF WYITDITIGS GETFLKTGDS PLLTVMSAGH
501: ALHVFVNGQL SGTAYGGLDH PKLTFSQKIK LHAGVNKIAL LSVAVGLPNV GTHFEQWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EALSLHTNTE
601: SSGVRWTQGS FVAKKQPLTW YKSTFATPAG NEPLALDMNT MGKGQVWING RNIGRHWPAY KAQGSCGRCN YAGTFDAKKC LSNCGEASQR WYHVPRSWLK
701: SQNLIVVFEE LGGDPNGISL VKRT

Arabidopsis Description

BGAL4Beta-galactosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.