Factsheet for GSMUA_Achr7P08950_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	92.93	92.93
GSMUA_Achr7P08970_001	Banana	vacuole	91.03	91.78
GSMUA_Achr7P08940_001	Banana	vacuole	91.17	91.67
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	82.61	82.83
CDX88594	Canola	golgi, vacuole	31.93	72.31
GSMUA_Achr2P16780_001	Banana	plastid	82.34	72.06
CDX76255	Canola	extracellular	12.5	71.88
Zm00001d046357_P001	Maize	extracellular	69.97	71.33
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	69.43	71.17
EER88554	Sorghum	golgi, vacuole	69.97	71.03
TraesCS6A01G185400.1	Wheat	golgi, vacuole	69.84	70.99
TraesCS6B01G214100.1	Wheat	golgi, vacuole	69.57	70.62
Os06t0573600-01	Rice	plasma membrane, vacuole	68.48	70.49
TraesCS7D01G359500.1	Wheat	golgi	68.61	70.43
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	63.86	70.15
TraesCS6D01G172400.1	Wheat	golgi, vacuole	68.89	69.93
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	68.21	69.92
Solyc12g008840.1.1	Tomato	extracellular	68.48	69.61
EES06516	Sorghum	mitochondrion, plastid	69.43	69.05
Os02t0219200-01	Rice	peroxisome, vacuole	46.88	69.0
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	69.29	68.27
CDX94367	Canola	mitochondrion	65.9	68.12
KRH37385	Soybean	nucleus	66.58	67.96
KRH12385	Soybean	vacuole	66.3	67.68
HORVU6Hr1G039490.6	Barley	plastid	70.11	67.54
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	64.13	66.29
AT5G56870.1	Thale cress	vacuole	65.08	66.16
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	65.62	65.98
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	73.78	65.9
CDY11899	Canola	golgi, vacuole	64.13	65.37
CDX95380	Canola	vacuole	64.54	65.34
Bra006850.1-P	Field mustard	golgi, vacuole	63.86	65.1
CDX89360	Canola	mitochondrion	61.41	64.66
CDX92753	Canola	golgi, vacuole	62.5	64.61
CDY32919	Canola	golgi, vacuole	63.18	64.4
Bra035634.1-P	Field mustard	golgi, vacuole	63.04	64.27
CDY20708	Canola	golgi, vacuole	62.91	64.13
AT4G26140.7	Thale cress	vacuole	65.49	64.01
Bra019120.1-P	Field mustard	golgi, vacuole	61.82	63.9
CDY42755	Canola	vacuole	61.68	63.76
CDX76254	Canola	golgi, nucleus, vacuole	50.68	63.44
KRH10007	Soybean	nucleus	71.88	62.98
KRH44153	Soybean	nucleus	71.33	62.28
KRH23324	Soybean	vacuole	71.06	62.19
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	71.06	62.19
KRH47126	Soybean	nucleus	71.33	62.13
CDY23637	Canola	golgi, vacuole	70.79	62.1
Bra027403.1-P	Field mustard	golgi, vacuole	70.65	61.98
CDX97513	Canola	golgi, vacuole	70.65	61.9
Solyc03g121540.2.1	Tomato	nucleus	70.38	61.81
PGSC0003DMT400006654	Potato	golgi, vacuole	70.24	61.69
CDY51738	Canola	golgi, vacuole	69.97	61.38
AT3G52840.2	Thale cress	golgi, vacuole	65.08	61.33
CDY37486	Canola	golgi, vacuole	69.7	61.14
Solyc12g044880.1.1	Tomato	golgi, vacuole	69.29	61.08
PGSC0003DMT400012359	Potato	golgi, vacuole	69.7	61.07
PGSC0003DMT400083896	Potato	extracellular	69.16	60.96
Solyc06g062580.2.1	Tomato	nucleus	69.57	60.88
AT3G13750.1	Thale cress	golgi, vacuole	69.97	60.8
Zm00001d053585_P002	Maize	plastid	68.21	60.55
Bra021506.1-P	Field mustard	vacuole	70.11	59.93
VIT_11s0016g02200.t01	Wine grape	vacuole	68.07	59.93
CDY69471	Canola	cytosol	33.83	59.86
CDY70594	Canola	cytosol	33.83	59.86
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	68.21	59.83
KRH02714	Soybean	golgi, vacuole	68.07	59.71
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	65.76	56.74
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	65.08	55.18
GSMUA_Achr4P06620_001	Banana	cytosol	45.92	52.48
GSMUA_Achr6P18730_001	Banana	golgi, vacuole	53.26	51.58
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	57.61	50.48
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	58.42	49.37
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.22	47.82
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	34.1	47.36
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	28.26	46.53
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	52.72	44.19
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	50.41	44.11
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	46.06	43.18
GSMUA_Achr11P...	Banana	golgi, vacuole	47.83	43.08
GSMUA_AchrUn_...	Banana	extracellular, vacuole	47.28	42.65
GSMUA_Achr1P14790_001	Banana	vacuole	46.88	41.82
GSMUA_Achr1P26480_001	Banana	vacuole	45.24	40.96
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	46.06	40.41
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	46.33	37.97

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSMUA_Achr7G08950_001	EnsemblPlants:GSMUA_Achr7P08950_001
EnsemblPlants:GSMUA_Achr7T08950_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979
UniProt:M0TFY3	PFAM:PF01301	PRINTS:PR00742	PANTHER:PTHR23421	PANTHER:PTHR23421:SF74	SUPFAM:SSF49785
SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI000294B046	SEG:seg	:	:

Description

Beta-galactosidase [Source:GMGC_GENE;Acc:GSMUA_Achr7G08950_001]

Coordinates

chr7:-:7328836..7333651

Molecular Weight (calculated)

81875.7 Da

IEP (calculated)

8.826

GRAVY (calculated)

-0.184

Length

736 amino acids

Sequence
(BLAST)

001: MSLELMTLGC SLGLSTLLLL AVALVVVSSL WLSTPVDASV SYDHKAIIVN GQRRILISGS IHYPRSTPEM WPDLIQKAKD GGLDVIQTYV FWNGHEPSPG
101: QYYFGGNYDL VRFIKLVKHA GLYVHLRIGP YVCAEWNFGG FPVWLKYVPG INFRTDNEPF KAAMAKFTEK IVAMMKSERL FESQGGPIIL SQQIENEYGP
201: MEKFGGAAAK NYVTWAAQMA VGLNTGVPWV MCKQDDAPDP VINACNGFYC DYFSPNKPYK PTMWTEAWTG WFTGFGGPVP HRPVQDLAFA VARFIQKGGS
301: FVNYYMYHGG TNFGRTAGGP FIATSYDYDA PIDEYGLLRQ PKWGHLRDLH KAIKWCEPAL VSADPTVTKL GNYQEAHVFR SKSGACAAFL SNFNPHSYAP
401: VTFNGMKYYI PAWSVSILPD CKTAVFNTAK VGAPTSQIIM TWVGGFSWES FSEVTHSLRD KSFSKDGLVE QISLTRDRTD YLWYTTYVNI DSNEQFLKNG
501: RDPLLTVMSA GHSMHVFVNG ERAGTVYGSF GSPKVRFTGN VKLWAGSNKI SILSVAVGLP NIGPHFDTRN AGVLGPVTLE GLNEGKRNLS SQKWIYQIGL
601: RGESLSIYTL SGSSSVKWWG ASTRQPLTWY KAFFNAPAGN EPLALDMSSM GKGQIWINGQ SIGRYWPAYK AYGSCDWCDY RGTYNQKKCQ TNCGEPSQKW
701: YHVPRAWLNP TGNLLVAFEE WGGDPTAISM VKRVAL

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.