Factsheet for GSMUA_Achr6P18730_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43757	Canola	golgi, vacuole	61.58	63.16
Bra024238.1-P	Field mustard	golgi, vacuole	61.45	63.02
CDX84446	Canola	golgi, vacuole	61.32	62.89
AT5G63810.1	Thale cress	golgi, vacuole	61.18	62.75
HORVU3Hr1G081970.1	Barley	vacuole	65.66	60.93
VIT_07s0031g02480.t01	Wine grape	extracellular	67.63	60.68
TraesCS3A01G386300.1	Wheat	golgi, vacuole	66.18	59.81
EES01845	Sorghum	endoplasmic reticulum, golgi, vacuole	66.18	59.67
TraesCS3B01G418400.2	Wheat	vacuole	66.05	59.48
TraesCS3D01G379300.2	Wheat	vacuole	66.05	59.48
HORVU3Hr1G081960.9	Barley	vacuole	66.05	59.34
TraesCS3A01G386200.1	Wheat	vacuole	65.53	59.0
TraesCS3D01G379200.1	Wheat	vacuole	65.0	58.53
KRH53957	Soybean	nucleus	64.34	57.87
KRH63980	Soybean	vacuole	63.95	57.65
TraesCS3B01G418300.2	Wheat	vacuole	64.08	56.76
Solyc03g019890.2.1	Tomato	nucleus	64.34	56.21
PGSC0003DMT400039333	Potato	extracellular, golgi	61.58	55.98
Zm00001d042654_P005	Maize	endoplasmic reticulum, golgi, vacuole	63.55	55.77
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	67.24	55.6
GSMUA_Achr7P08970_001	Banana	vacuole	51.18	53.29
GSMUA_Achr7P08940_001	Banana	vacuole	51.32	53.28
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	51.58	53.26
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	51.32	52.99
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	49.74	51.5
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	54.47	47.53
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	32.89	47.17
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	51.84	46.9
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	38.16	46.85
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	50.0	46.12
GSMUA_Achr9P21610_001	Banana	extracellular, golgi	51.71	46.07
GSMUA_Achr4P13580_001	Banana	golgi, vacuole	52.37	45.85
GSMUA_Achr2P16780_001	Banana	plastid	50.66	45.78
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	44.74	43.31
GSMUA_Achr4P06620_001	Banana	cytosol	36.45	43.01
GSMUA_Achr2P21790_001	Banana	golgi, vacuole	46.45	41.97
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	48.03	41.57
GSMUA_Achr1P14790_001	Banana	vacuole	44.34	40.85
GSMUA_AchrUn_...	Banana	extracellular, vacuole	43.82	40.81
GSMUA_Achr1P26480_001	Banana	vacuole	42.63	39.85
GSMUA_Achr11P...	Banana	golgi, vacuole	42.63	39.66
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	41.97	38.02
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	44.61	37.75

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.2.1.2.4	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0004565	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0009628	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0080167	EnsemblPlantsGene:GSMUA_Achr6G18730_001	EnsemblPlants:GSMUA_Achr6P18730_001	EnsemblPlants:GSMUA_Achr6T18730_001	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	UniProt:M0T871	PFAM:PF01301	PRINTS:PR00742
PANTHER:PTHR23421	PANTHER:PTHR23421:SF67	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI000296EFE7	SEG:seg	:	:	:	:

Description

Beta-galactosidase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G18730_001]

Coordinates

chr6:-:12933097..12943793

Molecular Weight (calculated)

85215.0 Da

IEP (calculated)

7.786

GRAVY (calculated)

-0.276

Length

760 amino acids

Sequence
(BLAST)

001: MAKNAGLLIL SLSFLFFLFF SVAVSRNVTF DHRSLIIDGQ RKLLISASIH YPRSVPAMWP DLVAAAKRGG VDVIETYVFW NGHEPSPGQY YFEDRFDLVR
101: FAKIVRDAGM YMILRIGPFV AAEWNYGGVP VWLHYVPGTV FRTDNEPFKS HMASFTTFIV QMMKRENLFA SQGGHIILAQ ATALNYHLIS ATDQIENEYG
201: DIESVYGDGG RSYSRWAANM ALSQNIGVPW IMCQQYDAPD NVINTCNSFY CDQFKPSSAN KPKFWTENWP GWGEIGERNK VHLEFQNFGT AKPHRPPEDI
301: AFAVARFFQK GGSLQNYYMY HGGTNFGRTS GGPFITTSYD YDAPIDEYGL VRLPKWSHLK ELHEAIKLCE QTLLYGTSKF LSLGSHQEAD IFEHSGKCVA
401: FLANVDERND KLVIFRNVRY NLPAWSVSIL PDCKNVVFNT AKVRSQNSRV EMVPENLKAS AGSGKLSWQV YTEKAGVWGA PDLIKNELVD HINTTKDTTD
501: YLWYTTSFYI DGNEFLSNGS LPILMVESKG HAVQAFVNGQ LQANSSGYTI KLEAPITLRA GVNEIALLSM TVGLQNAGPF YEWLGAGLTS VKISGLRNGG
601: LDLSGAAWAY KIGLVGEHQN IFKADGNHDV RWTPASDPPK NQPLTWYKVE VAPPQGNEPV ALDMQSMWKG QAWLNGKAIG RYWSLTSSVY NKCTQNCDYR
701: GPFSPDKCRT GCGEISQRWY HVPRSWFQPS GNTLVFFEEK GGDPTRITFA RRRVTAGAPA

Best Arabidopsis Sequence Match ( AT5G63810.1 )
(BLAST)

001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V

Arabidopsis Description

BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.