Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G386300.1 | Wheat | golgi, vacuole | 96.8 | 97.15 |
| TraesCS3B01G418400.2 | Wheat | vacuole | 96.68 | 96.68 |
| HORVU3Hr1G081960.9 | Barley | vacuole | 95.5 | 95.27 |
| TraesCS3D01G379200.1 | Wheat | vacuole | 86.85 | 86.85 |
| EES01845 | Sorghum | endoplasmic reticulum, golgi, vacuole | 81.99 | 82.09 |
| Zm00001d042654_P005 | Maize | endoplasmic reticulum, golgi, vacuole | 78.08 | 76.1 |
| Os01t0875500-01 | Rice | endoplasmic reticulum, mitochondrion, nucleus, vacuole | 81.4 | 74.76 |
| GSMUA_Achr6P18730_001 | Banana | golgi, vacuole | 59.48 | 66.05 |
| KRH53957 | Soybean | nucleus | 65.05 | 64.97 |
| VIT_07s0031g02480.t01 | Wine grape | extracellular | 64.93 | 64.7 |
| KRH63980 | Soybean | vacuole | 64.45 | 64.53 |
| CDY43757 | Canola | golgi, vacuole | 54.03 | 61.54 |
| Bra024238.1-P | Field mustard | golgi, vacuole | 53.91 | 61.4 |
| AT5G63810.1 | Thale cress | golgi, vacuole | 53.67 | 61.13 |
| PGSC0003DMT400039333 | Potato | extracellular, golgi | 60.55 | 61.12 |
| CDX84446 | Canola | golgi, vacuole | 53.55 | 61.0 |
| Solyc03g019890.2.1 | Tomato | nucleus | 62.56 | 60.69 |
| TraesCS7D01G359500.1 | Wheat | golgi | 43.6 | 51.33 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 43.25 | 50.34 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 49.53 | 50.06 |
| TraesCS4D01G220800.2 | Wheat | vacuole | 51.42 | 50.06 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 49.88 | 49.65 |
| TraesCS5D01G148400.1 | Wheat | unclear | 47.27 | 43.75 |
| TraesCS1D01G024200.1 | Wheat | vacuole | 42.3 | 43.06 |
| TraesCS7D01G272600.1 | Wheat | golgi, vacuole | 42.06 | 42.26 |
| TraesCS1D01G267600.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 40.76 | 41.95 |
| TraesCS3D01G379100.3 | Wheat | vacuole | 40.52 | 40.28 |
| TraesCS5D01G336700.2 | Wheat | vacuole | 38.03 | 38.26 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.2.1.2.4 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0030246 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 |
| InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | PFscan:PS50228 |
| PANTHER:PTHR23421 | PANTHER:PTHR23421:SF67 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS3D01G379300 | EnsemblPlants:TraesCS3D01G379300.2 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3D:+:496143122..496148910
Molecular Weight (calculated)
94116.0 Da
IEP (calculated)
7.126
GRAVY (calculated)
-0.372
Length
844 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVAGPRLL PWLLLLHPLL VVAAAAASGV TYDHRSLVIS GRRRLLISAS IHYPRSVPAM WPKLVAEAKD GGADCIETYV FWNGHETAPG KYYFEDRFDL
101: VQFARVVKDA GLYLMLRIGP FVAAEWNFGG VPAWLHYIPG TVFRTNNEPF KSHMKSFTTK IVDMMKKERF FASQGGHIIL AQIENEYGYY QQAYGAGGKA
201: YAMWAGSMAL AQNTGVPWIM CQQYDVPDHV INTCNSFYCD QFKPNLPTQP KIWTENWPGW FQTFGESNPH RPPEDVAFSV ARFFGKGGSV QNYYVYHGGT
301: NFDRTAGGPF ITTSYDYDAP IDEYGLKRFP KWAHLKELHK SIKLCEHSLL FGNSTLLSLG PQQEADVYTD HSGGCVAFLA NIDSEKDKVV TFRNRQYDLP
401: AWSVSILPDC KNVVFNTAKV RSQTLMVDMV PETLQASKPD QWSIFTERIG IWDKNDFVRN EFVDHINTTK DSTDYLWHTT SFDVDRNYPA SGNHPILNIG
501: SKGHAVHAFL NNMLIGSAYG NGSESSFSVQ MPINLKAGKN EIALLSMTVG LKSAGPYYEW VGAGLTSVNI SGMQNGTMDL SSNNWAYKIG LEGEHYRLFK
601: PDQGNNQRWR PQSEPPKHQP LTWYKVNVDV PQGDDPVGLD MQSMGKGLVW LNGNAIGRYW PRTSPTDDRC TPSCDYRGKF SPNKCRAGCG KPTQRWYHVP
701: RSWFHPSGNT LVVFEEQGGD PTKITFSRRV ATSVCSFVSE NYPSIDLESW DKSISDENPL AAKVQLSCPK GKNISSIKFA SFGDPSGTCR SYQQGSCHHP
801: DSLSVVEKAC LNINSCTVSL SDEGFGEDPC PGVTKTLAIE ADCS
101: VQFARVVKDA GLYLMLRIGP FVAAEWNFGG VPAWLHYIPG TVFRTNNEPF KSHMKSFTTK IVDMMKKERF FASQGGHIIL AQIENEYGYY QQAYGAGGKA
201: YAMWAGSMAL AQNTGVPWIM CQQYDVPDHV INTCNSFYCD QFKPNLPTQP KIWTENWPGW FQTFGESNPH RPPEDVAFSV ARFFGKGGSV QNYYVYHGGT
301: NFDRTAGGPF ITTSYDYDAP IDEYGLKRFP KWAHLKELHK SIKLCEHSLL FGNSTLLSLG PQQEADVYTD HSGGCVAFLA NIDSEKDKVV TFRNRQYDLP
401: AWSVSILPDC KNVVFNTAKV RSQTLMVDMV PETLQASKPD QWSIFTERIG IWDKNDFVRN EFVDHINTTK DSTDYLWHTT SFDVDRNYPA SGNHPILNIG
501: SKGHAVHAFL NNMLIGSAYG NGSESSFSVQ MPINLKAGKN EIALLSMTVG LKSAGPYYEW VGAGLTSVNI SGMQNGTMDL SSNNWAYKIG LEGEHYRLFK
601: PDQGNNQRWR PQSEPPKHQP LTWYKVNVDV PQGDDPVGLD MQSMGKGLVW LNGNAIGRYW PRTSPTDDRC TPSCDYRGKF SPNKCRAGCG KPTQRWYHVP
701: RSWFHPSGNT LVVFEEQGGD PTKITFSRRV ATSVCSFVSE NYPSIDLESW DKSISDENPL AAKVQLSCPK GKNISSIKFA SFGDPSGTCR SYQQGSCHHP
801: DSLSVVEKAC LNINSCTVSL SDEGFGEDPC PGVTKTLAIE ADCS
001: MNRVTTESIA STAILVVMVF LFSWRSIEAA NVSYDHRSLT IGNRRQLIIS AAIHYPRSVP AMWPSLVQTA KEGGCNAIES YVFWNGHEPS PGKYYFGGRY
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V
101: NIVKFIKIVQ QAGMHMILRI GPFVAAEWNY GGVPVWLHYV PGTVFRADNE PWKHYMESFT TYIVNLLKQE KLFAPQGGPI ILSQVENEYG YYEKDYGEGG
201: KRYAQWSASM AVSQNIGVPW MMCQQWDAPP TVISTCNGFY CDQFTPNTPD KPKIWTENWP GWFKTFGGRD PHRPAEDVAY SVARFFGKGG SVHNYYMYHG
301: GTNFGRTSGG PFITTSYDYE APIDEYGLPR LPKWGHLKDL HKAIMLSENL LISGEHQNFT LGHSLEADVY TDSSGTCAAF LSNLDDKNDK AVMFRNTSYH
401: LPAWSVSILP DCKTEVFNTA KVTSKSSKVE MLPEDLKSSS GLKWEVFSEK PGIWGAADFV KNELVDHINT TKDTTDYLWY TTSITVSENE AFLKKGSSPV
501: LFIESKGHTL HVFINKEYLG TATGNGTHVP FKLKKPVALK AGENNIDLLS MTVGLANAGS FYEWVGAGLT SVSIKGFNKG TLNLTNSKWS YKLGVEGEHL
601: ELFKPGNSGA VKWTVTTKPP KKQPLTWYKV VIEPPSGSEP VGLDMISMGK GMAWLNGEEI GRYWPRIARK NSPNDECVKE CDYRGKFMPD KCLTGCGEPS
701: QRWYHVPRSW FKSSGNELVI FEEKGGNPMK IKLSKRKVSV V
Arabidopsis Description
BGAL10Beta-galactosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FN08]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.