Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G278400.1 | Wheat | plastid | 97.07 | 96.6 |
| TraesCS1A01G267700.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 96.1 | 95.63 |
| HORVU1Hr1G065290.7 | Barley | vacuole | 94.27 | 94.04 |
| Os05t0428100-00 | Rice | golgi, vacuole | 79.39 | 80.27 |
| Zm00001d010212_P002 | Maize | endoplasmic reticulum, extracellular, golgi | 78.05 | 78.05 |
| KXG22057 | Sorghum | vacuole | 78.9 | 77.39 |
| TraesCS3D01G379100.3 | Wheat | vacuole | 71.59 | 69.14 |
| VIT_07s0031g02590.t01 | Wine grape | extracellular, golgi, vacuole | 33.78 | 60.09 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 59.63 | 59.85 |
| KRH40964 | Soybean | golgi, vacuole | 50.0 | 58.24 |
| Solyc11g018500.1.1 | Tomato | cytosol, golgi, vacuole | 48.41 | 57.12 |
| VIT_18s0001g02220.t01 | Wine grape | vacuole | 56.59 | 57.07 |
| KRH53267 | Soybean | golgi, vacuole | 48.17 | 56.67 |
| KRH64633 | Soybean | vacuole | 48.05 | 56.61 |
| Bra024237.1-P | Field mustard | vacuole | 34.15 | 55.89 |
| KRH53958 | Soybean | golgi, vacuole | 48.78 | 55.79 |
| KRH63978 | Soybean | golgi, vacuole | 48.78 | 55.79 |
| PGSC0003DMT400023852 | Potato | extracellular | 42.56 | 55.48 |
| PGSC0003DMT400023851 | Potato | nucleus, peroxisome, vacuole | 48.78 | 55.25 |
| Solyc11g018490.1.1 | Tomato | cytosol | 50.37 | 54.7 |
| VIT_18s0001g02230.t01 | Wine grape | golgi, vacuole | 54.39 | 54.32 |
| CDX84445 | Canola | vacuole | 47.68 | 54.31 |
| AT5G63800.1 | Thale cress | vacuole | 47.44 | 54.18 |
| Bra029200.1-P | Field mustard | vacuole | 47.56 | 54.17 |
| CDY39845 | Canola | vacuole | 47.32 | 53.89 |
| AT1G77410.3 | Thale cress | golgi, vacuole | 53.29 | 53.29 |
| CDY43756 | Canola | cytosol, nucleus, peroxisome | 32.8 | 52.75 |
| CDY31349 | Canola | vacuole | 47.56 | 52.63 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 46.1 | 45.27 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 39.76 | 44.97 |
| TraesCS7D01G359500.1 | Wheat | golgi | 39.15 | 44.77 |
| TraesCS7D01G272600.1 | Wheat | golgi, vacuole | 45.61 | 44.52 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 45.49 | 43.99 |
| TraesCS4D01G220800.2 | Wheat | vacuole | 45.24 | 42.79 |
| TraesCS3D01G379300.2 | Wheat | vacuole | 41.95 | 40.76 |
| TraesCS3D01G379200.1 | Wheat | vacuole | 41.46 | 40.28 |
| TraesCS5D01G148400.1 | Wheat | unclear | 43.54 | 39.14 |
| TraesCS5D01G336700.2 | Wheat | vacuole | 39.02 | 38.14 |
| TraesCS1D01G024200.1 | Wheat | vacuole | 36.34 | 35.95 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 |
| InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 |
| InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 |
| PFscan:PS50228 | PFscan:PS51257 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF118 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS1D01G267600 | EnsemblPlants:TraesCS1D01G267600.2 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:-:363588768..363596267
Molecular Weight (calculated)
91077.1 Da
IEP (calculated)
6.543
GRAVY (calculated)
-0.223
Length
820 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRVDAAVAV ALIVLTACAS SAAAGDGRRV EEGGGGEVTN DGRALVVNGT RRMLFSGEMH YTRSTPEMWP KLIANARKGG LDVIQTYVFW NVHEPVQGQY
101: NFEGRYDLVK FIREIQAQGL YVSLRIGPFI EAEWKYGGFP FWLHDVPNIT FRTDNEPFKQ HMQRFVTQIV SMMKQEGLYY PQGGPIIISQ IENEYQMVEP
201: AFGSGGPRYV RWAAEMAVGL QTGVPWMMCK QNDAPDPIIN TCNGLICGET FVGPNSPSKP ALWTENWTTR YPIYGNDTKL RSTEDIAFAV ALFIARKKGS
301: FVSYYMYHGG TNFGRFASSY VTTSYYDGAP LDEYGLIWRP TWGHLRELHA AVNLSSEPLL FGTYSNFSLG QEQEAHIFET ELKCVAFLVN FDKHQSPTVV
401: FRNIPFQLAP KSISILSECR TVVFETAKVN AQYGSRTAKV VESLNDIHTW KAFKEPIPED ISKAVYTGNQ LFEHLSMTKD ETDYLWYIVS YEYRPSDDGQ
501: LVLLNAESRA HVLHAFVNTE YVGCVHGSHD GPGNIILNTN ISLKEGQNTI SLLSVMVGSP DSGAHMERRS FGIRKVSIQQ GQQPLHLLNN ELWGYQVGLY
601: GEGKRIYTQE ESSSVEWTEI NSLTYHPLTW YKTTFAAPVG NDAVALNLTS MGKGEVWVNG ESIGRYWVSF KAPSGQPSQS LYHIPQHFLK PTDNLLVLVE
701: EIGGNPLEIT VNTVSITTVC GSVNELSSPA LHTQGKDPEV RLRCQRGKHI SAIEFASYGN PAGDCTTFST GSCHAALSES VVKQACIGKR GCSIPVSPAR
801: FGGDPCPGIQ KSLLVVANCR
101: NFEGRYDLVK FIREIQAQGL YVSLRIGPFI EAEWKYGGFP FWLHDVPNIT FRTDNEPFKQ HMQRFVTQIV SMMKQEGLYY PQGGPIIISQ IENEYQMVEP
201: AFGSGGPRYV RWAAEMAVGL QTGVPWMMCK QNDAPDPIIN TCNGLICGET FVGPNSPSKP ALWTENWTTR YPIYGNDTKL RSTEDIAFAV ALFIARKKGS
301: FVSYYMYHGG TNFGRFASSY VTTSYYDGAP LDEYGLIWRP TWGHLRELHA AVNLSSEPLL FGTYSNFSLG QEQEAHIFET ELKCVAFLVN FDKHQSPTVV
401: FRNIPFQLAP KSISILSECR TVVFETAKVN AQYGSRTAKV VESLNDIHTW KAFKEPIPED ISKAVYTGNQ LFEHLSMTKD ETDYLWYIVS YEYRPSDDGQ
501: LVLLNAESRA HVLHAFVNTE YVGCVHGSHD GPGNIILNTN ISLKEGQNTI SLLSVMVGSP DSGAHMERRS FGIRKVSIQQ GQQPLHLLNN ELWGYQVGLY
601: GEGKRIYTQE ESSSVEWTEI NSLTYHPLTW YKTTFAAPVG NDAVALNLTS MGKGEVWVNG ESIGRYWVSF KAPSGQPSQS LYHIPQHFLK PTDNLLVLVE
701: EIGGNPLEIT VNTVSITTVC GSVNELSSPA LHTQGKDPEV RLRCQRGKHI SAIEFASYGN PAGDCTTFST GSCHAALSES VVKQACIGKR GCSIPVSPAR
801: FGGDPCPGIQ KSLLVVANCR
001: MTTFQYSLVF LVLMAVIVAG DVANVTYDGR SLIIDGEHKI LFSGSIHYTR STPQMWPSLI AKAKSGGIDV VDTYVFWNVH EPQQGQFDFS GSRDIVKFIK
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS
101: EVKNHGLYVC LRIGPFIQGE WSYGGLPFWL HNVQGIVFRT DNEPFKYHMK RYAKMIVKLM KSENLYASQG GPIILSQIEN EYGMVGRAFR QEGKSYVKWT
201: AKLAVELDTG VPWVMCKQDD APDPLVNACN GRQCGETFKG PNSPNKPAIW TENWTSFYQT YGEEPLIRSA EDIAFHVALF IAKNGSFVNY YMYHGGTNFG
301: RNASQFVITS YYDQAPLDEY GLLRQPKWGH LKELHAAVKL CEEPLLSGLQ TTISLGKLQT AFVFGKKANL CAAILVNQDK CESTVQFRNS SYRLSPKSVS
401: VLPDCKNVAF NTAKVNAQYN TRTRKARQNL SSPQMWEEFT ETVPSFSETS IRSESLLEHM NTTQDTSDYL WQTTRFQQSE GAPSVLKVNH LGHALHAFVN
501: GRFIGSMHGT FKAHRFLLEK NMSLNNGTNN LALLSVMVGL PNSGAHLERR VVGSRSVKIW NGRYQLYFNN YSWGYQVGLK GEKFHVYTED GSAKVQWKQY
601: RDSKSQPLTW YKASFDTPEG EDPVALNLGS MGKGEAWVNG QSIGRYWVSF HTYKGNPSQI WYHIPRSFLK PNSNLLVILE EEREGNPLGI TIDTVSVTEV
701: CGHVSNTNPH PVISPRKKGL NRKNLTYRYD RKPKVQLQCP TGRKISKILF ASFGTPNGSC GSYSIGSCHS PNSLAVVQKA CLKKSRCSVP VWSKTFGGDS
801: CPHTVKSLLV RAQCS
Arabidopsis Description
BGAL16beta-galactosidase 16 [Source:TAIR;Acc:AT1G77410]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.