Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G083700.3 | Wheat | extracellular | 96.08 | 97.66 |
| TraesCS4B01G220500.1 | Wheat | golgi | 94.58 | 96.13 |
| HORVU0Hr1G008780.10 | Barley | plasma membrane, vacuole | 94.92 | 94.71 |
| EER92534 | Sorghum | endoplasmic reticulum, golgi | 82.93 | 83.6 |
| Zm00001d028474_P002 | Maize | vacuole | 83.16 | 80.29 |
| Os03t0255100-01 | Rice | extracellular | 82.81 | 75.1 |
| KRH22910 | Soybean | nucleus | 66.44 | 68.57 |
| KRH29942 | Soybean | extracellular, golgi, vacuole | 66.09 | 68.38 |
| GSMUA_Achr4P20830_001 | Banana | golgi, vacuole | 68.28 | 67.97 |
| VIT_06s0004g03020.t01 | Wine grape | extracellular | 65.97 | 67.61 |
| KRH26431 | Soybean | golgi, vacuole | 65.17 | 67.26 |
| KRG89008 | Soybean | nucleus | 64.01 | 66.39 |
| Bra000493.1-P | Field mustard | golgi, vacuole | 64.01 | 65.76 |
| CDY15749 | Canola | golgi, vacuole | 64.01 | 65.76 |
| AT2G28470.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 64.59 | 65.73 |
| Bra011946.1-P | Field mustard | golgi, vacuole | 63.9 | 65.56 |
| GSMUA_Achr4P22060_001 | Banana | golgi, vacuole | 63.44 | 65.48 |
| CDY31204 | Canola | golgi, vacuole | 63.67 | 65.4 |
| CDY04567 | Canola | golgi, vacuole | 64.01 | 65.29 |
| CDX83288 | Canola | golgi, vacuole | 63.44 | 65.09 |
| PGSC0003DMT400020941 | Potato | extracellular | 63.78 | 64.91 |
| Solyc11g069270.1.1 | Tomato | extracellular | 63.44 | 64.55 |
| TraesCS6D01G172400.1 | Wheat | golgi, vacuole | 46.14 | 55.17 |
| TraesCS7D01G359500.1 | Wheat | golgi | 45.56 | 55.09 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 52.13 | 53.3 |
| TraesCS3D01G211500.2 | Wheat | golgi, vacuole | 51.21 | 53.17 |
| TraesCS3D01G379300.2 | Wheat | vacuole | 50.06 | 51.42 |
| TraesCS3D01G379200.1 | Wheat | vacuole | 49.83 | 51.18 |
| TraesCS5D01G148400.1 | Wheat | unclear | 50.98 | 48.46 |
| TraesCS1D01G024200.1 | Wheat | vacuole | 44.52 | 46.56 |
| TraesCS1D01G267600.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 42.79 | 45.24 |
| TraesCS3D01G379100.3 | Wheat | vacuole | 40.83 | 41.7 |
| TraesCS7D01G272600.1 | Wheat | golgi, vacuole | 39.68 | 40.95 |
| TraesCS5D01G336700.2 | Wheat | vacuole | 35.64 | 36.83 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030312 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat |
| InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom |
| PFAM:PF01301 | PFAM:PF02140 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
| PANTHER:PTHR23421:SF72 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4D01G220800 |
| EnsemblPlants:TraesCS4D01G220800.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:377844974..377849838
Molecular Weight (calculated)
93890.8 Da
IEP (calculated)
6.344
GRAVY (calculated)
-0.160
Length
867 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVGRLPSA VVALLLALLC LAGTSVATNV TYDHRALVID GVRRVLVSGS IHYPRSTPDM WPGLMQKAKD GGLDMVETYV FWDVHEPVRG QYDFEGRNDL
101: VRFVKAAADA GLYVHLRIGP YVCAEWNYGG FPLWLHFIPG IKFRTDNEPF KTEMQRFTEK VVATMKGAGL YASQGGPIIL SQIENEYGNI DASYGAPGKS
201: YIRWAAGMAV ALDTGVPWVM CQQADTPAPL INTCNGFYCD QFTPSLSSRP KLWTENWSGW FLSFGGAVPY RPTEDLAFAV ARFYQRGGTL QNYYMYHGGT
301: NFGRSSGGPF ISTSYDYDAP IDEYGLVRQP KWGHLRDVHK AIKMCEPALI ATDPSYMSLG QNAEAHVYKA GSLCAAFLAN IDNQSDKTVT FNGKAYKLPA
401: WSVSILPDCK NVVLNTAQIN SQVASTQMRN LGFSTQASDG SSVEAELASS TWSYAVEPVG ITKENAMTKP GLMEQINTTA DASDFLWYST SIIVAGDEPY
501: LNGSQSNLLV NSLGHVLQVF VNGKFAGSSK GSATSSLISL TTPVTLVPGK NKIDLLSATV GLTNYGAFFD LVGAGITGPV KLTGPKGTLD LSSADWTYQY
601: CCLFPYQNIW SLQIGLRGED LHLYNPSEAS PEWVSDNSYP TNNPLTWYKS KFTTPAGDDP VAIDFTGMGK GEAWVNGQSI GRYWPTNIAP QSGCVNSCNY
701: RGPYSASKCQ KKCGQPSQIL YHVPRSFLQP GSNDIVLFEQ FGGDPSKISF TTKQTESVCA HVSEDHPDQI DSWISPQQKL QRSGPALRLE CPKEGQVISS
801: IKFASFGTPS GTCGSYSHGE CSSSQALAVA QEACVGVSSC SVPVSAKNFG DPCRGVTKSL VVEAACS
101: VRFVKAAADA GLYVHLRIGP YVCAEWNYGG FPLWLHFIPG IKFRTDNEPF KTEMQRFTEK VVATMKGAGL YASQGGPIIL SQIENEYGNI DASYGAPGKS
201: YIRWAAGMAV ALDTGVPWVM CQQADTPAPL INTCNGFYCD QFTPSLSSRP KLWTENWSGW FLSFGGAVPY RPTEDLAFAV ARFYQRGGTL QNYYMYHGGT
301: NFGRSSGGPF ISTSYDYDAP IDEYGLVRQP KWGHLRDVHK AIKMCEPALI ATDPSYMSLG QNAEAHVYKA GSLCAAFLAN IDNQSDKTVT FNGKAYKLPA
401: WSVSILPDCK NVVLNTAQIN SQVASTQMRN LGFSTQASDG SSVEAELASS TWSYAVEPVG ITKENAMTKP GLMEQINTTA DASDFLWYST SIIVAGDEPY
501: LNGSQSNLLV NSLGHVLQVF VNGKFAGSSK GSATSSLISL TTPVTLVPGK NKIDLLSATV GLTNYGAFFD LVGAGITGPV KLTGPKGTLD LSSADWTYQY
601: CCLFPYQNIW SLQIGLRGED LHLYNPSEAS PEWVSDNSYP TNNPLTWYKS KFTTPAGDDP VAIDFTGMGK GEAWVNGQSI GRYWPTNIAP QSGCVNSCNY
701: RGPYSASKCQ KKCGQPSQIL YHVPRSFLQP GSNDIVLFEQ FGGDPSKISF TTKQTESVCA HVSEDHPDQI DSWISPQQKL QRSGPALRLE CPKEGQVISS
801: IKFASFGTPS GTCGSYSHGE CSSSQALAVA QEACVGVSSC SVPVSAKNFG DPCRGVTKSL VVEAACS
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.