Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 7
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
24773703
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc11g069270.1.1 | Tomato | extracellular | 95.89 | 95.89 |
VIT_06s0004g03020.t01 | Wine grape | extracellular | 74.77 | 75.3 |
KRH22910 | Soybean | nucleus | 72.3 | 73.33 |
KRH29942 | Soybean | extracellular, golgi, vacuole | 71.95 | 73.15 |
KRG89008 | Soybean | nucleus | 70.54 | 71.89 |
KRH26431 | Soybean | golgi, vacuole | 70.77 | 71.79 |
CDY15749 | Canola | golgi, vacuole | 69.13 | 69.79 |
Bra011946.1-P | Field mustard | golgi, vacuole | 68.78 | 69.35 |
Bra000493.1-P | Field mustard | golgi, vacuole | 68.66 | 69.31 |
CDY31204 | Canola | golgi, vacuole | 68.54 | 69.19 |
AT2G28470.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 69.13 | 69.13 |
CDX83288 | Canola | golgi, vacuole | 68.19 | 68.76 |
CDY04567 | Canola | golgi, vacuole | 68.54 | 68.71 |
GSMUA_Achr4P20830_001 | Banana | golgi, vacuole | 69.6 | 68.08 |
GSMUA_Achr4P22060_001 | Banana | golgi, vacuole | 64.79 | 65.71 |
EER92534 | Sorghum | endoplasmic reticulum, golgi | 65.85 | 65.23 |
TraesCS4A01G083700.3 | Wheat | extracellular | 65.26 | 65.18 |
TraesCS4B01G220500.1 | Wheat | golgi | 65.14 | 65.06 |
HORVU0Hr1G008780.10 | Barley | plasma membrane, vacuole | 65.14 | 63.87 |
TraesCS4D01G220800.2 | Wheat | vacuole | 64.91 | 63.78 |
Zm00001d028474_P002 | Maize | vacuole | 65.96 | 62.58 |
Os03t0255100-01 | Rice | extracellular | 65.85 | 58.68 |
PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 44.13 | 56.12 |
PGSC0003DMT400083896 | Potato | extracellular | 54.58 | 55.69 |
PGSC0003DMT400006654 | Potato | golgi, vacuole | 54.58 | 55.49 |
PGSC0003DMT400079498 | Potato | vacuole | 47.18 | 55.3 |
PGSC0003DMT400012359 | Potato | golgi, vacuole | 54.46 | 55.24 |
PGSC0003DMT400057597 | Potato | golgi, vacuole | 44.01 | 54.11 |
PGSC0003DMT400009496 | Potato | nucleus, peroxisome, vacuole | 34.27 | 53.97 |
PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 52.93 | 53.37 |
PGSC0003DMT400059880 | Potato | cytosol | 45.07 | 49.87 |
PGSC0003DMT400067956 | Potato | extracellular | 52.11 | 49.78 |
PGSC0003DMT400039333 | Potato | extracellular, golgi | 48.83 | 49.76 |
PGSC0003DMT400023851 | Potato | nucleus, peroxisome, vacuole | 40.38 | 47.51 |
PGSC0003DMT400023852 | Potato | extracellular | 33.8 | 45.79 |
PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 23.59 | 44.97 |
PGSC0003DMT400031178 | Potato | vacuole | 40.85 | 41.98 |
PGSC0003DMT400015841 | Potato | endoplasmic reticulum, golgi, vacuole | 39.55 | 41.66 |
Protein Annotations
KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | EntrezGene:102604796 |
Gene3D:2.60.120.260 | Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0004553 | GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 |
InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 |
InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | UniProt:M1AEB9 | PFAM:PF01301 | PFAM:PF02140 | EnsemblPlantsGene:PGSC0003DMG400008109 |
PGSC:PGSC0003DMG400008109 | EnsemblPlants:PGSC0003DMT400020941 | PRINTS:PR00742 | ScanProsite:PS01182 | PFscan:PS50228 | PANTHER:PTHR23421 |
PANTHER:PTHR23421:SF74 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI0002963EFC | RefSeq:XP_006340153.1 |
SEG:seg | : | : | : | : | : |
Description
Beta-galactosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400008109]
Coordinates
chr11:+:41197787..41206297
Molecular Weight (calculated)
93097.4 Da
IEP (calculated)
7.077
GRAVY (calculated)
-0.187
Length
852 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKSGYCLS VIMLVFGVVF LHCLVMTSFA ASVTYDHRAL VIDGKRRVLI SGSIHYPRST PDMWPDLIQK SKDGGLDVIE TYVFWNLHEP VRNLYDFEGR
101: KDLINFVKLV EKAGLFVHIR IGPYVCAEWN YGGFPLWLHF IPGIEFRTDN EPFKAEMKRF TTKIVDMIKQ ENLFASQGGP VILSQIENEY GNGDIESRYG
201: PRAKPYVNWA ASMATTLDTG VPWVMCQQPD APPSVINTCN GFYCDQFKQN SDKTPKMWTE NWTGWFLSFG GPVPYRPVED IAFAVARFFQ RGGTFQNYYM
301: YHGGTNFGRT SGGPFIATSY DYDAPLDEYG LIRQPKWGHL KDLHKAIKLC EAAMVATDPN ITSLGSTIEA SVYKTDSQCA AFLANTATQS DAAVSFNGNS
401: YHLPPWSVSI LPDCKNVAFN TAKINSVSTI STFVTQSSEA DASGASLSGW TSVNEPVGIS SENAFTRMGL VEQINITADK SDYLWYSLSV NIKNDEPFLQ
501: DGSATVLHVK TLGHVLHAFI NGKLSGSGKG NSGHSNFTIE VPVTLVPGVN KIDLLSATVG LQNYGAFFDL KGAGITGPVQ LKGFKNGSTT DLSSKQWTYQ
601: VGLKGEEMGL SSGGSTLWKS QTELPTNQPL IWYKASFDAP AGDTPLSMDF TGMGKGEAWV NGQSIGRFWP TYTAPNSGCT DPCNYRGGYN ANKCLKNCGK
701: PSQLLYHVPR SWLKSSGNVL VLFEEMGGDP TKLSFATREI QSVCSRISEA HPLPIDMWAS EDDARNKSGP TLSLECPHPN QVISSIKFAS FGTPQGTCGS
801: FIHGRCSSSN ALSIVKKACI GSKSCSLGVS INVFGEPCKG VAKSLAVEAS CT
101: KDLINFVKLV EKAGLFVHIR IGPYVCAEWN YGGFPLWLHF IPGIEFRTDN EPFKAEMKRF TTKIVDMIKQ ENLFASQGGP VILSQIENEY GNGDIESRYG
201: PRAKPYVNWA ASMATTLDTG VPWVMCQQPD APPSVINTCN GFYCDQFKQN SDKTPKMWTE NWTGWFLSFG GPVPYRPVED IAFAVARFFQ RGGTFQNYYM
301: YHGGTNFGRT SGGPFIATSY DYDAPLDEYG LIRQPKWGHL KDLHKAIKLC EAAMVATDPN ITSLGSTIEA SVYKTDSQCA AFLANTATQS DAAVSFNGNS
401: YHLPPWSVSI LPDCKNVAFN TAKINSVSTI STFVTQSSEA DASGASLSGW TSVNEPVGIS SENAFTRMGL VEQINITADK SDYLWYSLSV NIKNDEPFLQ
501: DGSATVLHVK TLGHVLHAFI NGKLSGSGKG NSGHSNFTIE VPVTLVPGVN KIDLLSATVG LQNYGAFFDL KGAGITGPVQ LKGFKNGSTT DLSSKQWTYQ
601: VGLKGEEMGL SSGGSTLWKS QTELPTNQPL IWYKASFDAP AGDTPLSMDF TGMGKGEAWV NGQSIGRFWP TYTAPNSGCT DPCNYRGGYN ANKCLKNCGK
701: PSQLLYHVPR SWLKSSGNVL VLFEEMGGDP TKLSFATREI QSVCSRISEA HPLPIDMWAS EDDARNKSGP TLSLECPHPN QVISSIKFAS FGTPQGTCGS
801: FIHGRCSSSN ALSIVKKACI GSKSCSLGVS INVFGEPCKG VAKSLAVEAS CT
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.