Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- golgi 4
- mitochondrion 2
- vacuole 3
- extracellular 3
- endoplasmic reticulum 2
- plasma membrane 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g078950.2.1 | Tomato | vacuole | 95.24 | 78.2 |
| PGSC0003DMT400009496 | Potato | nucleus, peroxisome, vacuole | 40.84 | 52.31 |
| PGSC0003DMT400020941 | Potato | extracellular | 54.11 | 44.01 |
| PGSC0003DMT400000899 | Potato | nucleus, peroxisome, vacuole | 41.56 | 42.99 |
| PGSC0003DMT400006654 | Potato | golgi, vacuole | 49.78 | 41.17 |
| PGSC0003DMT400083896 | Potato | extracellular | 49.35 | 40.96 |
| PGSC0003DMT400012359 | Potato | golgi, vacuole | 48.92 | 40.36 |
| PGSC0003DMT400079498 | Potato | vacuole | 41.85 | 39.89 |
| PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 48.63 | 39.88 |
| PGSC0003DMT400023851 | Potato | nucleus, peroxisome, vacuole | 40.69 | 38.95 |
| PGSC0003DMT400067956 | Potato | extracellular | 49.49 | 38.45 |
| PGSC0003DMT400039333 | Potato | extracellular, golgi | 45.45 | 37.68 |
| PGSC0003DMT400011458 | Potato | cytosol, nucleus, peroxisome | 24.24 | 37.58 |
| PGSC0003DMT400059880 | Potato | cytosol | 41.27 | 37.14 |
| PGSC0003DMT400015841 | Potato | endoplasmic reticulum, golgi, vacuole | 41.27 | 35.35 |
| PGSC0003DMT400031178 | Potato | vacuole | 40.84 | 34.14 |
| PGSC0003DMT400023852 | Potato | extracellular | 30.88 | 34.02 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:21.3.2.2.2 | Gene3D:3.20.20.80 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0004565 | GO:GO:0005488 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0030246 | InterPro:Galactose-bd-like_sf | InterPro:Gly_Hdrlase_35_cat | InterPro:Glyco_hydro_35_CS | InterPro:Glycoside_Hdrlase_35 |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | UniProt:M1C1C4 | PFAM:PF01301 |
| PFAM:PF02140 | EnsemblPlantsGene:PGSC0003DMG400022365 | PGSC:PGSC0003DMG400022365 | EnsemblPlants:PGSC0003DMT400057597 | PRINTS:PR00742 | ScanProsite:PS01182 |
| PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF72 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | UniParc:UPI000294B6E3 |
Description
Beta-galactosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400022365]
Coordinates
chr2:-:34594318..34600104
Molecular Weight (calculated)
76412.3 Da
IEP (calculated)
7.167
GRAVY (calculated)
-0.244
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLFLAKIVN LMKDENLFAT QGGPIILAQV ENEYGNVEWA YGISGELYVK WAAETAVNLN TTVPWVMCAQ ADAPDSVINT CNGFYCDRFT PNSPSKPKMW
101: TENYVGWFLA FGYPVPYRPV EDLAFAVARF FETGGTFQNY YMYFGGTNFG RTAGGPLVAT SYDYDAPIDE YGFISQPKWG HLRDLHRAIK HCEEYLVNAD
201: PTHLSLGLKL EAHVYYKSSN DCAAFLANYG NSSDANVTFN GKSYFLPAWS VSILPDCKNV IFNTAKVVSQ KTTGSTAFTH NTVTIENSME SDPWGWYKEK
301: VGIANNHSFA SPRILEQINT TKDTSDFLWY TTRINVEENI KKRKAKELQL IIRSLGHAAL VFVNKKPVGF GYGNHDDASF VLSKKIHLKK GSNTVDILSM
401: MVGLQNYGPW FDISGAGVSS VIFSDLKNSK NFSSTEWIYQ VGLEGEYLGL DKVSLANSSL WIQGSSVPTN QSLIWYKTSF SPPEGRGPVS LNLSSMGKGQ
501: AWVNGEHIGR YWSSYRSPST GCSDNCDYRG AYDSWKCLKK CGQPAQVLYH VPRSWLKPGK NLLVLHEELG GDPSKISFST RSGQKICAHV SESDPPPVDT
601: WKPNKDLTSQ EPSLQLNCDQ GWTIAAVNFA SFGTPTGDCG AFIKGSCHLD VLSIVHQGCV GKSGCSIPIT MAKLGDPCPG VPKSLAVEAF CSV
101: TENYVGWFLA FGYPVPYRPV EDLAFAVARF FETGGTFQNY YMYFGGTNFG RTAGGPLVAT SYDYDAPIDE YGFISQPKWG HLRDLHRAIK HCEEYLVNAD
201: PTHLSLGLKL EAHVYYKSSN DCAAFLANYG NSSDANVTFN GKSYFLPAWS VSILPDCKNV IFNTAKVVSQ KTTGSTAFTH NTVTIENSME SDPWGWYKEK
301: VGIANNHSFA SPRILEQINT TKDTSDFLWY TTRINVEENI KKRKAKELQL IIRSLGHAAL VFVNKKPVGF GYGNHDDASF VLSKKIHLKK GSNTVDILSM
401: MVGLQNYGPW FDISGAGVSS VIFSDLKNSK NFSSTEWIYQ VGLEGEYLGL DKVSLANSSL WIQGSSVPTN QSLIWYKTSF SPPEGRGPVS LNLSSMGKGQ
501: AWVNGEHIGR YWSSYRSPST GCSDNCDYRG AYDSWKCLKK CGQPAQVLYH VPRSWLKPGK NLLVLHEELG GDPSKISFST RSGQKICAHV SESDPPPVDT
601: WKPNKDLTSQ EPSLQLNCDQ GWTIAAVNFA SFGTPTGDCG AFIKGSCHLD VLSIVHQGCV GKSGCSIPIT MAKLGDPCPG VPKSLAVEAF CSV
001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS
Arabidopsis Description
BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.