Factsheet for Os03t0255100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
golgi 3
vacuole 2
plastid 1
extracellular 2
endoplasmic reticulum 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	golgi
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

extracellular: 23159799
extracellular: 24083427
extracellular: 25047395
plastid: 27992503
extracellular: 28232208

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92534	Sorghum	endoplasmic reticulum, golgi	77.41	86.05
TraesCS4A01G083700.3	Wheat	extracellular	75.52	84.64
TraesCS4B01G220500.1	Wheat	golgi	75.1	84.17
HORVU0Hr1G008780.10	Barley	plasma membrane, vacuole	75.42	82.97
TraesCS4D01G220800.2	Wheat	vacuole	75.1	82.81
Zm00001d028474_P002	Maize	vacuole	76.67	81.63
KRH22910	Soybean	nucleus	60.77	69.17
KRH29942	Soybean	extracellular, golgi, vacuole	60.36	68.85
GSMUA_Achr4P20830_001	Banana	golgi, vacuole	62.55	68.66
VIT_06s0004g03020.t01	Wine grape	extracellular	60.46	68.32
KRH26431	Soybean	golgi, vacuole	59.52	67.74
CDY15749	Canola	golgi, vacuole	59.2	67.06
AT2G28470.1	Thale cress	endoplasmic reticulum, golgi, vacuole	59.62	66.9
Bra011946.1-P	Field mustard	golgi, vacuole	59.1	66.86
CDY04567	Canola	golgi, vacuole	59.41	66.82
Bra000493.1-P	Field mustard	golgi, vacuole	58.68	66.47
CDY31204	Canola	golgi, vacuole	58.68	66.47
KRG89008	Soybean	nucleus	57.85	66.15
CDX83288	Canola	golgi, vacuole	58.26	65.92
Solyc11g069270.1.1	Tomato	extracellular	58.68	65.85
PGSC0003DMT400020941	Potato	extracellular	58.68	65.85
GSMUA_Achr4P22060_001	Banana	golgi, vacuole	57.22	65.12
Os06t0573600-01	Rice	plasma membrane, vacuole	41.74	55.8
Os01t0580200-01	Rice	golgi, vacuole	46.97	54.29
Os03t0165400-01	Rice	vacuole	46.76	53.15
Os06t0628500-00	Rice	extracellular, golgi, vacuole	16.32	53.06
Os02t0219200-01	Rice	peroxisome, vacuole	27.3	52.2
Os12t0429200-01	Rice	plasma membrane	47.28	49.18
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	46.86	48.75
Os10t0340600-01	Rice	extracellular, golgi, vacuole	40.06	46.26
Os10t0330600-01	Rice	extracellular	39.96	46.14
Os09t0539200-01	Rice	vacuole	21.44	45.96
Os05t0428100-00	Rice	golgi, vacuole	38.81	45.75
Os08t0549200-01	Rice	plasma membrane	36.19	40.8

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4332289	EMBL:AK067479	UniProt:B7EDJ0
ProteinID:BAS83320.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	GO:GO:0048046	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	EnsemblPlantsGene:Os03g0255100	EnsemblPlants:Os03t0255100-01	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742
ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF72	SUPFAM:SSF49785	SUPFAM:SSF51445
TMHMM:TMhelix	UniParc:UPI0000DB457B	RefSeq:XP_015632058.1	SEG:seg	:	:

Description

BETA-GALACTOSIDASE 8Similar to Relative to SR12 protein (Fragment). (Os03t0255100-01);Similar to Beta-galactosidase. (Os03t0255100-02)

Coordinates

chr3:-:8196070..8201999

Molecular Weight (calculated)

103705.0 Da

IEP (calculated)

6.204

GRAVY (calculated)

-0.082

Length

956 amino acids

Sequence
(BLAST)

001: MHHHPHPRER DTAAFAPAAP LASLVAAAEC VPFISVPPRH SNQQLLFFFF FFFFFFFFFS FASPTEQLCS SFLLLLLVIV RTSAGDNRTT PNGAAAAVMA
101: AATVGVLLRL LLLPVVVVVS LLVGASRAAN VTYDHRAVVI DGVRRVLVSG SIHYPRSTPD MWPGLIQKSK DGGLDVIETY VFWDIHEAVR GQYDFEGRKD
201: LVRFVKAVAD AGLYVHLRIG PYVCAEWNYG GFPVWLHFVP GIKFRTDNEA FKAEMQRFTE KVVDTMKGAG LYASQGGPII LSQIENEYGN IDSAYGAAGK
301: AYMRWAAGMA VSLDTGVPWV MCQQSDAPDP LINTCNGFYC DQFTPNSKSK PKMWTENWSG WFLSFGGAVP YRPAEDLAFA VARFYQRGGT FQNYYMYHGG
401: TNFGRSTGGP FIATSYDYDA PIDEYGMVRQ PKWGHLRDVH KAIKLCEPAL IAAEPSYSSL GQNTEATVYQ TADNSICAAF LANVDAQSDK TVKFNGNTYK
501: LPAWSVSILP DCKNVVLNTA QINSQVTTSE MRSLGSSIQD TDDSLITPEL ATAGWSYAIE PVGITKENAL TKPGLMEQIN TTADASDFLW YSTSIVVKGD
601: EPYLNGSQSN LLVNSLGHVL QIYINGKLAG SAKGSASSSL ISLQTPVTLV PGKNKIDLLS TTVGLSNYGA FFDLVGAGVT GPVKLSGPNG ALNLSSTDWT
701: YQIGLRGEDL HLYNPSEASP EWVSDNAYPT NQPLIWYKTK FTAPAGDDPV AIDFTGMGKG EAWVNGQSIG RYWPTNLAPQ SGCVNSCNYR GAYSSNKCLK
801: KCGQPSQTLY HVPRSFLQPG SNDLVLFEQF GGDPSMISFT TRQTSSICAH VSEMHPAQID SWISPQQTSQ TQGPALRLEC PREGQVISNI KFASFGTPSG
901: TCGNYNHGEC SSSQALAVVQ EACVGMTNCS VPVSSNNFGD PCSGVTKSLV VEAACS

Best Arabidopsis Sequence Match ( AT2G28470.3 )
(BLAST)

001: MEIAAKMVKV RKMEMILLLI LVIVVAATAA NVTYDHRALV IDGKRKVLIS GSIHYPRSTP EMWPELIQKS KDGGLDVIET YVFWSGHEPE KNKYNFEGRY
101: DLVKFVKLAA KAGLYVHLRI GPYVCAEWNY GGFPVWLHFV PGIKFRTDNE PFKEEMQRFT TKIVDLMKQE KLYASQGGPI ILSQIENEYG NIDSAYGAAA
201: KSYIKWSASM ALSLDTGVPW NMCQQTDAPD PMINTCNGFY CDQFTPNSNN KPKMWTENWS GWFLGFGDPS PYRPVEDLAF AVARFYQRGG TFQNYYMYHG
301: GTNFDRTSGG PLISTSYDYD APIDEYGLLR QPKWGHLRDL HKAIKLCEDA LIATDPTITS LGSNLEAAVY KTESGSCAAF LANVDTKSDA TVTFNGKSYN
401: LPAWSVSILP DCKNVAFNTA KINSATESTA FARQSLKPDG GSSAELGSQW SYIKEPIGIS KADAFLKPGL LEQINTTADK SDYLWYSLRT DIKGDETFLD
501: EGSKAVLHIE SLGQVVYAFI NGKLAGSGHG KQKISLDIPI NLVTGTNTID LLSVTVGLAN YGAFFDLVGA GITGPVTLKS AKGGSSIDLA SQQWTYQVGL
601: KGEDTGLATV DSSEWVSKSP LPTKQPLIWY KTTFDAPSGS EPVAIDFTGT GKGIAWVNGQ SIGRYWPTSI AGNGGCTESC DYRGSYRANK CLKNCGKPSQ
701: TLYHVPRSWL KPSGNILVLF EEMGGDPTQI SFATKQTGSN LCLTVSQSHP PPVDTWTSDS KISNRNRTRP VLSLKCPIST QVIFSIKFAS FGTPKGTCGS
801: FTQGHCNSSR SLSLVQKACI GLRSCNVEVS TRVFGEPCRG VVKSLAVEAS CS

Arabidopsis Description

BGAL8Beta-galactosidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV4]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.