Factsheet for Os08t0549200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G057460.1	Barley	golgi	77.48	78.97
TraesCS7D01G272600.1	Wheat	golgi, vacuole	76.3	77.02
TraesCS7A01G272400.2	Wheat	vacuole	75.71	75.26
TraesCS7B01G169700.1	Wheat	vacuole	76.18	74.17
Zm00001d053225_P005	Maize	golgi, vacuole	73.23	73.4
KXG25431	Sorghum	golgi	73.23	73.23
Zm00001d032022_P003	Maize	golgi, vacuole	72.29	72.12
Os09t0539200-01	Rice	vacuole	32.67	62.11
GSMUA_Achr1P26480_001	Banana	vacuole	58.02	60.52
GSMUA_AchrUn_...	Banana	extracellular, vacuole	57.55	59.8
GSMUA_Achr1P14790_001	Banana	vacuole	56.84	58.42
GSMUA_Achr4P05130_001	Banana	golgi, plastid, vacuole	56.96	57.57
VIT_03s0038g02360.t01	Wine grape	extracellular, golgi	52.95	53.9
KRH24309	Soybean	golgi, vacuole	52.36	52.67
Solyc01g111540.2.1	Tomato	unclear	51.53	52.59
PGSC0003DMT400015841	Potato	endoplasmic reticulum, golgi, vacuole	50.12	52.53
KRH60700	Soybean	extracellular, golgi, vacuole	52.24	52.49
KRH29286	Soybean	extracellular, golgi, vacuole	51.77	52.14
Solyc10g055470.1.1	Tomato	vacuole	50.12	51.27
PGSC0003DMT400031178	Potato	vacuole	50.0	51.15
Os06t0628500-00	Rice	extracellular, golgi, vacuole	17.69	51.02
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	46.23	50.26
Bra001991.1-P	Field mustard	golgi, vacuole	47.88	50.0
AT2G16730.1	Thale cress	extracellular, golgi, vacuole	49.41	49.41
Bra013052.1-P	Field mustard	golgi, vacuole	49.29	49.41
CDY40650	Canola	vacuole	49.06	49.29
Bra011577.1-P	Field mustard	vacuole	49.06	49.23
CDX75479	Canola	vacuole	49.06	49.23
Bra017687.1-P	Field mustard	vacuole	48.94	49.17
AT4G35010.1	Thale cress	vacuole	48.94	49.11
CDX69103	Canola	vacuole	48.82	49.05
CDX72512	Canola	vacuole	48.7	48.93
CDX72747	Canola	vacuole	49.65	47.52
CDY70118	Canola	cytosol	33.14	47.31
Os05t0428100-00	Rice	golgi, vacuole	43.87	45.87
Bra033571.1-P	Field mustard	cytosol	50.24	44.56
CDY22419	Canola	cytosol	50.24	44.56
Os06t0573600-01	Rice	plasma membrane, vacuole	37.26	44.2
Os01t0580200-01	Rice	golgi, vacuole	42.45	43.53
Os03t0165400-01	Rice	vacuole	42.1	42.45
CDY02241	Canola	golgi, vacuole	49.29	42.26
Os02t0219200-01	Rice	peroxisome, vacuole	24.41	41.4
Os10t0340600-01	Rice	extracellular, golgi, vacuole	38.92	39.86
AT4G38590.2	Thale cress	golgi, vacuole	49.06	39.54
Os10t0330600-01	Rice	extracellular	38.44	39.37
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	42.57	39.28
CDX89744	Canola	vacuole	49.06	38.31
Os12t0429200-01	Rice	plasma membrane	39.62	36.56
Os03t0255100-01	Rice	extracellular	40.8	36.19

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4346248	EMBL:AK069066	ProteinID:BAD08952.1
ProteinID:BAF24354.1	ProteinID:BAT06573.1	ProteinID:BAT06574.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0004565	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030312	GO:GO:0048046
InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922
InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	EnsemblPlantsGene:Os08g0549200	EnsemblPlants:Os08t0549200-01	PFAM:PF01301	PFAM:PF02140
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF52	UniProt:Q6ZJJ0
SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000023AC85	RefSeq:XP_015650676.1
SEG:seg	:	:	:	:	:

Description

BETA-GALACTOSIDASE 10Glycoside hydrolase, family 35 protein. (Os08t0549200-01);Similar to Beta-galactosidase. (Os08t0549200-02)

Coordinates

chr8:+:27560631..27565182

Molecular Weight (calculated)

94744.3 Da

IEP (calculated)

9.274

GRAVY (calculated)

-0.354

Length

848 amino acids

Sequence
(BLAST)

001: MSAAAVLAVV AAAVAALAAA ASGYELTKNG TVITYDRRSL IIDGHREIFF SGSIHYPRSP PDTWPDLISK AKEGGLNVIE SYVFWNGHEP EQGVYNFEGR
101: YDLIKFFKLI QEKEMYAIVR IGPFVQAEWN HGGLPYWLRE IPDIIFRTNN EPFKKYMKQF VTLIVNKLKE AKLFASQGGP IILAQIENEY QHLEVAFKEA
201: GTKYINWAAK MAIATNTGVP WIMCKQTKAP GEVIPTCNGR HCGDTWPGPA DKKKPLLWTE NWTAQYRVFG DPPSQRSAED IAFSVARFFS VGGTMANYYM
301: YHGGTNFGRN GAAFVMPRYY DEAPLDEFGL YKEPKWGHLR DLHHALRHCK KALLWGNPSV QPLGKLYEAR VFEMKEKNVC VAFLSNHNTK EDGTVTFRGQ
401: KYFVARRSIS ILADCKTVVF STQHVNSQHN QRTFHFADQT VQDNVWEMYS EEKIPRYSKT SIRTQRPLEQ YNQTKDKTDY LWYTTSFRLE TDDLPYRKEV
501: KPVLEVSSHG HAIVAFVNDA FVGCGHGTKI NKAFTMEKAM DLKVGVNHVA ILSSTLGLMD SGSYLEHRMA GVYTVTIRGL NTGTLDLTTN GWGHVVGLDG
601: ERRRVHSEQG MGAVAWKPGK DNQPLTWYRR RFDPPSGTDP VVIDLTPMGK GFLFVNGEGL GRYWVSYHHA LGKPSQYLYH VPRSLLRPKG NTLMFFEEEG
701: GKPDAIMILT VKRDNICTFM TEKNPAHVRW SWESKDSQPK AVAGAGAGAG GLKPTAVLSC PTKKTIQSVV FASYGNPLGI CGNYTVGSCH APRTKEVVEK
801: ACIGRKTCSL VVSSEVYGGD VHCPGTTGTL AVQAKCSKRP PRSAATAQ

Best Arabidopsis Sequence Match ( AT2G16730.1 )
(BLAST)

001: MKIHSSDHSW LLLAVLVILL SFSGALSSDD KEKKTKSVDK KKEVTYDGTS LIINGNRELL YSGSIHYPRS TPEMWPNIIK RAKQGGLNTI QTYVFWNVHE
101: PEQGKFNFSG RADLVKFIKL IEKNGLYVTL RLGPFIQAEW THGGLPYWLR EVPGIFFRTD NEPFKEHTER YVKVVLDMMK EEKLFASQGG PIILGQIENE
201: YSAVQRAYKE DGLNYIKWAS KLVHSMDLGI PWVMCKQNDA PDPMINACNG RHCGDTFPGP NKDNKPSLWT ENWTTQFRVF GDPPAQRSVE DIAYSVARFF
301: SKNGTHVNYY MYHGGTNFGR TSAHYVTTRY YDDAPLDEFG LEREPKYGHL KHLHNALNLC KKALLWGQPR VEKPSNETEI RYYEQPGTKV CAAFLANNNT
401: EAAEKIKFRG KEYLIPHRSI SILPDCKTVV YNTGEIISHH TSRNFMKSKK ANKNFDFKVF TESVPSKIKG DSFIPVELYG LTKDESDYGW YTTSFKIDDN
501: DLSKKKGGKP NLRIASLGHA LHVWLNGEYL GNGHGSHEEK SFVFQKPVTL KEGENHLTML GVLTGFPDSG SYMEHRYTGP RSVSILGLGS GTLDLTEENK
601: WGNKVGMEGE RLGIHAEEGL KKVKWEKASG KEPGMTWYQT YFDAPESQSA AAIRMNGMGK GLIWVNGEGV GRYWMSFLSP LGQPTQIEYH IPRSFLKPKK
701: NLLVIFEEEP NVKPELIDFV IVNRDTVCSY IGENYTPSVR HWTRKNDQVQ AITDDVHLTA NLKCSGTKKI SAVEFASFGN PNGTCGNFTL GSCNAPVSKK
801: VVEKYCLGKA ECVIPVNKST FEQDKKDSCP KVEKKLAVQV KCGRDKKN

Arabidopsis Description

BGAL13Beta-galactosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCU9]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.