Factsheet for Os06t0573600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13750.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88554	Sorghum	golgi, vacuole	86.43	85.24
Zm00001d046357_P001	Maize	extracellular	85.73	84.9
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	85.03	84.68
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	84.9	84.54
TraesCS7D01G359500.1	Wheat	golgi	84.62	84.38
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	84.48	80.86
Os02t0219200-01	Rice	peroxisome, vacuole	53.99	77.2
GSMUA_Achr7P08970_001	Banana	vacuole	72.45	70.96
GSMUA_Achr7P08940_001	Banana	vacuole	70.91	69.26
CDX88594	Canola	golgi, vacuole	31.47	69.23
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	71.05	69.21
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	71.19	69.16
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	70.49	68.48
CDX76255	Canola	extracellular	12.03	67.19
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	61.96	66.12
CDX94367	Canola	mitochondrion	65.59	65.87
Solyc12g008840.1.1	Tomato	extracellular	65.73	64.92
Bra019644.1-P	Field mustard	golgi, plastid, vacuole	64.34	64.61
Bra013956.1-P	Field mustard	cytosol, mitochondrion, plastid, vacuole	65.59	64.07
AT5G56870.1	Thale cress	vacuole	64.62	63.81
KRH37385	Soybean	nucleus	64.2	63.66
KRH12385	Soybean	vacuole	64.06	63.52
CDX95380	Canola	vacuole	64.48	63.41
CDX89360	Canola	mitochondrion	61.68	63.09
CDX92753	Canola	golgi, vacuole	62.38	62.64
CDY11899	Canola	golgi, vacuole	63.22	62.6
Bra006850.1-P	Field mustard	golgi, vacuole	63.08	62.47
CDX76254	Canola	golgi, nucleus, vacuole	51.19	62.24
Bra019120.1-P	Field mustard	golgi, vacuole	61.96	62.22
CDY42755	Canola	vacuole	61.82	62.08
GSMUA_Achr2P16780_001	Banana	plastid	72.59	61.71
AT4G26140.7	Thale cress	vacuole	64.76	61.49
CDY32919	Canola	golgi, vacuole	61.4	60.8
Bra035634.1-P	Field mustard	golgi, vacuole	61.4	60.8
CDY20708	Canola	golgi, vacuole	61.26	60.66
Os01t0580200-01	Rice	golgi, vacuole	69.65	60.22
AT3G52840.2	Thale cress	golgi, vacuole	63.78	58.39
CDY70594	Canola	cytosol	33.57	57.69
CDY69471	Canola	cytosol	33.57	57.69
VIT_09s0002g02120.t01	Wine grape	golgi, vacuole	67.83	57.67
KRH44153	Soybean	nucleus	67.41	57.18
KRH47126	Soybean	nucleus	67.55	57.16
KRH10007	Soybean	nucleus	67.13	57.14
KRH23324	Soybean	vacuole	66.99	56.96
CDY23637	Canola	golgi, vacuole	66.71	56.85
Bra027403.1-P	Field mustard	golgi, vacuole	66.71	56.85
Solyc03g121540.2.1	Tomato	nucleus	66.57	56.8
PGSC0003DMT400006654	Potato	golgi, vacuole	66.43	56.68
CDX97513	Canola	golgi, vacuole	66.57	56.67
AT3G13750.1	Thale cress	golgi, vacuole	66.85	56.43
PGSC0003DMT400083896	Potato	extracellular	65.73	56.29
CDY51738	Canola	golgi, vacuole	66.01	56.26
KRH02714	Soybean	golgi, vacuole	65.87	56.14
Solyc12g044880.1.1	Tomato	golgi, vacuole	65.45	56.05
CDY37486	Canola	golgi, vacuole	65.73	56.02
Solyc06g062580.2.1	Tomato	nucleus	65.87	56.0
PGSC0003DMT400012359	Potato	golgi, vacuole	65.59	55.83
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	65.31	55.66
VIT_11s0016g02200.t01	Wine grape	vacuole	64.34	55.02
Bra021506.1-P	Field mustard	vacuole	66.15	54.94
Os06t0628500-00	Rice	extracellular, golgi, vacuole	22.24	54.08
Os03t0165400-01	Rice	vacuole	61.96	52.68
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	28.25	45.19
Os09t0539200-01	Rice	vacuole	27.55	44.17
Os03t0255100-01	Rice	extracellular	55.8	41.74
Os01t0875500-01	Rice	endoplasmic reticulum, mitochondrion, nucleus, vacuole	52.59	40.91
Os12t0429200-01	Rice	plasma membrane	52.03	40.48
Os05t0428100-00	Rice	golgi, vacuole	45.73	40.32
Os10t0330600-01	Rice	extracellular	45.73	39.49
Os10t0340600-01	Rice	extracellular, golgi, vacuole	45.45	39.25
Os08t0549200-01	Rice	plasma membrane	44.2	37.26

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	EntrezGene:4341358	EMBL:AK102756	ProteinID:BAD61846.1	ProteinID:BAF19834.1
ProteinID:BAS98330.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
GO:GO:0048046	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR008979	EnsemblPlantsGene:Os06g0573600	EnsemblPlants:Os06t0573600-01	PFAM:PF01301	PRINTS:PR00742	ScanProsite:PS01182
PANTHER:PTHR23421	PANTHER:PTHR23421:SF120	UniProt:Q5Z7L0	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI0000450696	RefSeq:XP_015644212.1	SEG:seg	:	:	:

Description

BETA-GALACTOSIDASE 2Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase). (Os06t0573600-01);Similar to Beta-galactosidase. (Os06t0573600-02);Similar to Beta-galactosidase. (Os06t0573600-03)

Coordinates

chr6:+:22245386..22251547

Molecular Weight (calculated)

78284.2 Da

IEP (calculated)

7.722

GRAVY (calculated)

-0.236

Length

715 amino acids

Sequence
(BLAST)

001: MSGGAVAFLL LVAAAAVANA AVTYDHRSLT INGQRRILIS GSIHYPRSTP EMWPDLIQKA KDGGLDVIQT YVFWNGHEPV QGQYYFSDRY DLVRFVKLVK
101: QAGLYVNLRI GPYVCAEWNY GGFPVWLKYV PGISFRTDNG PFKAAMQTFV EKIVSMMKSE GLFEWQGGPI ILAQVENEYG PMESVMGSGA KSYVDWAAKM
201: AVATNAGVPW IMCKQDDAPD PVINTCNGFY CDDFTPNSKN KPSMWTEAWS GWFTAFGGTV PQRPVEDLAF AVARFIQKGG SFINYYMYHG GTNFDRTAGG
301: PFIATSYDYD APIDEYGLLR QPKWGHLTNL HKAIKQAETA LVAGDPTVQN IGNYEKAYVF RSSSGDCAAF LSNFHTSAAA RVAFNGRRYD LPAWSISVLP
401: DCRTAVYNTA TVTAASSPAK MNPAGGFTWQ SYGEATNSLD ETAFTKDGLV EQLSMTWDKS DYLWYTTYVN IDSGEQFLKS GQWPQLTVYS AGHSVQVFVN
501: GQYFGNAYGG YDGPKLTYSG YVKMWQGSNK ISILSSAVGL PNVGTHYETW NIGVLGPVTL SGLNEGKRDL SKQKWTYQIG LKGEKLGVHS VSGSSSVEWG
601: GAAGKQPVTW HRAYFNAPAG GAPVALDLGS MGKGQAWVNG HLIGRYWSYK ASGNCGGCSY AGTYSEKKCQ ANCGDASQRW YHVPRSWLNP SGNLVVLLEE
701: FGGDLSGVTL MTRTT

Best Arabidopsis Sequence Match ( AT3G13750.1 )
(BLAST)

001: MGSKPNAMKN VVAMAAVSAL FLLGFLVCSV SGSVSYDSRA ITINGKRRIL ISGSIHYPRS TPEMWPDLIR KAKEGGLDVI QTYVFWNGHE PSPGKYYFEG
101: NYDLVKFVKL VQQSGLYLHL RIGPYVCAEW NFGGFPVWLK YIPGISFRTD NGPFKAQMQR FTTKIVNMMK AERLFESQGG PIILSQIENE YGPMEYELGA
201: PGRSYTNWAA KMAVGLGTGV PWVMCKQDDA PDPIINACNG FYCDYFSPNK AYKPKMWTEA WTGWFTKFGG PVPYRPAEDM AFSVARFIQK GGSFINYYMY
301: HGGTNFGRTA GGPFIATSYD YDAPLDEYGL ERQPKWGHLK DLHRAIKLCE PALVSGEPTR MPLGNYQEAH VYKSKSGACS AFLANYNPKS YAKVSFGNNH
401: YNLPPWSISI LPDCKNTVYN TARVGAQTSR MKMVRVPVHG GLSWQAYNED PSTYIDESFT MVGLVEQINT TRDTSDYLWY MTDVKVDANE GFLRNGDLPT
501: LTVLSAGHAM HVFINGQLSG SAYGSLDSPK LTFRKGVNLR AGFNKIAILS IAVGLPNVGP HFETWNAGVL GPVSLNGLNG GRRDLSWQKW TYKVGLKGES
601: LSLHSLSGSS SVEWAEGAFV AQKQPLTWYK TTFSAPAGDS PLAVDMGSMG KGQIWINGQS LGRHWPAYKA VGSCSECSYT GTFREDKCLR NCGEASQRWY
701: HVPRSWLKPS GNLLVVFEEW GGDPNGITLV RREVDSVCAD IYEWQSTLVN YQLHASGKVN KPLHPKAHLQ CGPGQKITTV KFASFGTPEG TCGSYRQGSC
801: HAHHSYDAFN KLCVGQNWCS VTVAPEMFGG DPCPNVMKKL AVEAVCA

Arabidopsis Description

BGAL1Beta-galactosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCW1]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.