CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20708	Canola	golgi, vacuole	97.65	97.65
CDX88594	Canola	golgi, vacuole	42.8	95.08
CDY11899	Canola	golgi, vacuole	90.58	90.58
AT5G56870.1	Thale cress	vacuole	88.78	88.54
CDY69471	Canola	cytosol	50.83	88.22
CDY70594	Canola	cytosol	50.42	87.5
CDX76255	Canola	extracellular	14.96	84.38
CDX94367	Canola	mitochondrion	77.15	78.23
CDX92753	Canola	golgi, vacuole	76.59	77.67
CDY42755	Canola	vacuole	76.45	77.53
CDX95380	Canola	vacuole	76.45	75.93
CDX89360	Canola	mitochondrion	72.58	74.96
CDX76254	Canola	golgi, nucleus, vacuole	60.66	74.49
KRH37385	Soybean	nucleus	67.73	67.82
KRH12385	Soybean	vacuole	67.31	67.41
PGSC0003DMT400000899	Potato	nucleus, peroxisome, vacuole	62.33	67.16
Solyc12g008840.1.1	Tomato	extracellular	66.48	66.3
GSMUA_Achr7P08970_001	Banana	vacuole	64.82	64.11
GSMUA_Achr6P00880_001	Banana	golgi, vacuole	65.1	64.03
GSMUA_Achr7P08960_001	Banana	endoplasmic reticulum, golgi, vacuole	64.68	63.45
GSMUA_Achr7P08950_001	Banana	golgi, vacuole	64.4	63.18
GSMUA_Achr7P08940_001	Banana	vacuole	63.43	62.57
Os06t0573600-01	Rice	plasma membrane, vacuole	60.8	61.4
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	60.94	61.28
Zm00001d046357_P001	Maize	extracellular	61.08	61.08
TraesCS7D01G359500.1	Wheat	golgi	60.53	60.95
TraesCS6A01G185400.1	Wheat	golgi, vacuole	61.08	60.91
EER88554	Sorghum	golgi, vacuole	61.08	60.83
TraesCS6B01G214100.1	Wheat	golgi, vacuole	60.94	60.69
TraesCS7A01G363600.1	Wheat	plasma membrane, vacuole	60.11	60.45
TraesCS6D01G172400.1	Wheat	golgi, vacuole	60.66	60.41
CDX98327	Canola	golgi, vacuole	20.91	60.16
CDY36028	Canola	plastid	59.14	59.97
CDY53959	Canola	golgi, vacuole	59.97	59.32
CDY47949	Canola	golgi, vacuole	59.7	59.04
HORVU7Hr1G086690.2	Barley	plasma membrane, vacuole	60.94	58.9
KRH19154	Soybean	golgi, mitochondrion, plastid, vacuole	68.01	58.52
EES06516	Sorghum	mitochondrion, plastid	59.83	58.38
KRH02714	Soybean	golgi, vacuole	67.59	58.16
HORVU6Hr1G039490.6	Barley	plastid	61.08	57.72
Os02t0219200-01	Rice	peroxisome, vacuole	39.47	57.0
VIT_11s0016g02200.t01	Wine grape	vacuole	65.93	56.94
CDY23637	Canola	golgi, vacuole	65.79	56.62
CDX97513	Canola	golgi, vacuole	65.79	56.55
GSMUA_Achr2P16780_001	Banana	plastid	65.1	55.89
CDY51738	Canola	golgi, vacuole	64.82	55.78
CDY37486	Canola	golgi, vacuole	64.4	55.42
Os01t0580200-01	Rice	golgi, vacuole	62.88	54.9
Zm00001d044290_P005	Maize	golgi, vacuole	63.02	54.82
OQU87043	Sorghum	golgi, vacuole	62.74	54.78
GSMUA_Achr6P35850_001	Banana	golgi, vacuole	62.19	54.49
HORVU3Hr1G050450.12	Barley	golgi, vacuole	62.05	53.91
TraesCS3A01G208600.1	Wheat	plastid	62.33	53.89
TraesCS3D01G211500.2	Wheat	golgi, vacuole	62.19	53.77
TraesCS3B01G235100.1	Wheat	golgi, vacuole	62.05	53.52
Zm00001d053585_P002	Maize	plastid	59.97	52.23
CDX75569	Canola	golgi, vacuole	58.17	50.79
CDY43757	Canola	golgi, vacuole	52.08	50.74
CDX84446	Canola	golgi, vacuole	51.94	50.61
CDX69219	Canola	vacuole	57.62	50.49
CDY59693	Canola	vacuole	58.73	49.53
CDY70160	Canola	vacuole	36.7	48.62
CDY39845	Canola	vacuole	46.54	46.67
CDY15749	Canola	golgi, vacuole	53.46	45.73
CDY31204	Canola	golgi, vacuole	53.19	45.5
CDY31349	Canola	vacuole	46.54	45.34
CDX84445	Canola	vacuole	45.01	45.14
CDY04567	Canola	golgi, vacuole	52.91	44.94
CDX83288	Canola	golgi, vacuole	52.49	44.85
PGSC0003DMT400011458	Potato	cytosol, nucleus, peroxisome	26.87	43.4
CDY43756	Canola	cytosol, nucleus, peroxisome	30.06	42.55
CDY65885	Canola	vacuole	48.2	42.39
CDX93659	Canola	vacuole	47.78	42.18
CDX67790	Canola	vacuole	47.51	42.09
CDY28339	Canola	vacuole	45.84	42.01
CDY34975	Canola	golgi, plasma membrane, vacuole	45.84	42.01
CDY23785	Canola	vacuole	51.25	41.43
CDY59725	Canola	cytosol	17.87	41.35
CDY19166	Canola	golgi, vacuole	50.83	41.33
CDY32304	Canola	cytosol	45.43	37.19
CDX75479	Canola	vacuole	43.07	36.8
CDY69031	Canola	cytosol, plastid, vacuole	31.58	36.72
CDX69103	Canola	vacuole	42.8	36.61
CDY31414	Canola	cytosol, golgi, mitochondrion, peroxisome	39.47	36.54
CDY40650	Canola	vacuole	41.83	35.78
CDX72512	Canola	vacuole	41.69	35.66
CDY59691	Canola	cytosol, nucleus, vacuole	16.62	34.09
CDX72747	Canola	vacuole	41.55	33.86
CDX67763	Canola	golgi, plasma membrane, vacuole	35.6	33.33
CDY53917	Canola	plastid	44.88	31.49
CDY70118	Canola	cytosol	25.9	31.48
CDY22419	Canola	cytosol	41.41	31.28
CDY02241	Canola	golgi, vacuole	42.38	30.94
CDX89744	Canola	vacuole	42.38	28.18

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:A0A078H604	UniProt:A0A078H604	EnsemblPlants:CDY32919	ProteinID:CDY32919
ProteinID:CDY32919.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0004565	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00053102001	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR008979	PFAM:PF01301
PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421	PANTHER:PTHR23421:SF63	MetaCyc:PWY-6807	SUPFAM:SSF49785
SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0004EC27FC	:	:	:

Description

BnaC02g12030DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078H604]

Coordinates

chrLK032302:-:325473..330262

Molecular Weight (calculated)

80826.6 Da

IEP (calculated)

9.078

GRAVY (calculated)

-0.204

Length

722 amino acids

Sequence
(BLAST)

001: MGLNVRDKVS IFLAILCYSS LICSVKATVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGN YYFGDRYDLV
101: KFIKLVQQAG LYVNLRIGPF VCAEWNFGGF PVWLKFVPGI AFRTDNEPFK AAMKKFTEKI VWMMKAERLF QTQGGPIILA QIENEYGPVE WELGAPAKAY
201: TQWAAQMALG LQTGVPWIMC KQEDAPSPII DTCNGYYCEG FKPNSINKPK MWTENWTGWY TEFGGAVPYR PVEDIAYSVA RFIQNGGSFV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKVI KLSEPALVSA DATVTYLGAK QEAHVFWSKS SCAAFLSNND VNSPARVMFR GFPYDLPPWS
401: VSILPDCKTE YYNTAKVNAP SVHRNMVSTG TRFSWESFNE VVPFVNEAGT FARNGLVEQI SMTWDKSDYF WYLTDITVGA GERFLKTGDF PLLTALSAGH
501: ALHVFVNGQL AGRAYGSLEH TSLTFSQKIK LHAGVNRLAL LSVVVGLPNV GKHFETWNKG VLGAVTLKGV NSGTWDMSKW KWSYKVGMKG EALSLHTPTS
601: SVRWNQGSFL AKNQPLTWYK SIFAAPPGNE PLAVDMNTMG KGQVWINGRN IGRHWAAYKA KGNCGRCNYA GTFTATKCLS NCGEASQRWY HVPRSWLKPQ
701: NVIVVFEEWG GDTSGISLVK RI

Best Arabidopsis Sequence Match ( AT5G56870.1 )
(BLAST)

001: MVLNFRDKSC IFLAILCCLS LSCIVKASVS YDRKAVIING QRRILLSGSI HYPRSTPEMW PGLIQKAKEG GLDVIETYVF WNGHEPSPGQ YYFGDRYDLV
101: KFIKLVHQAG LYVNLRIGPY VCAEWNFGGF PVWLKFVPGM AFRTDNEPFK AAMKKFTEKI VWMMKAEKLF QTQGGPIILA QIENEYGPVE WEIGAPGKAY
201: TKWVAQMALG LSTGVPWIMC KQEDAPGPII DTCNGYYCED FKPNSINKPK MWTENWTGWY TDFGGAVPYR PVEDIAYSVA RFIQKGGSLV NYYMYHGGTN
301: FDRTAGEFMA SSYDYDAPLD EYGLPREPKY SHLKALHKAI KLSEPALLSA DATVTSLGAK QEAYVFWSKS SCAAFLSNKD ENSAARVLFR GFPYDLPPWS
401: VSILPDCKTE VYNTAKVNAP SVHRNMVPTG TKFSWGSFNE ATPTANEAGT FARNGLVEQI SMTWDKSDYF WYITDITIGS GETFLKTGDS PLLTVMSAGH
501: ALHVFVNGQL SGTAYGGLDH PKLTFSQKIK LHAGVNKIAL LSVAVGLPNV GTHFEQWNKG VLGPVTLKGV NSGTWDMSKW KWSYKIGVKG EALSLHTNTE
601: SSGVRWTQGS FVAKKQPLTW YKSTFATPAG NEPLALDMNT MGKGQVWING RNIGRHWPAY KAQGSCGRCN YAGTFDAKKC LSNCGEASQR WYHVPRSWLK
701: SQNLIVVFEE LGGDPNGISL VKRT

Arabidopsis Description

BGAL4Beta-galactosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.