Subcellular Localization
min:
: max
Winner_takes_all: vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G36360.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G36360.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59725 | Canola | cytosol | 72.16 | 81.41 |
| CDX69219 | Canola | vacuole | 92.33 | 39.44 |
| CDX75569 | Canola | golgi, vacuole | 90.91 | 38.69 |
| CDY59693 | Canola | vacuole | 93.47 | 38.43 |
| AT4G36360.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 89.2 | 36.68 |
| GSMUA_Achr4P06620_001 | Banana | cytosol | 59.38 | 32.45 |
| KRH69834 | Soybean | extracellular, golgi | 72.44 | 30.07 |
| KRH08131 | Soybean | nucleus | 71.88 | 29.83 |
| CDY70594 | Canola | cytosol | 35.23 | 29.81 |
| KRH28740 | Soybean | nucleus | 72.16 | 29.78 |
| KRH76716 | Soybean | nucleus | 71.59 | 29.68 |
| VIT_04s0023g02690.t01 | Wine grape | extracellular, golgi | 71.02 | 29.59 |
| CDY69471 | Canola | cytosol | 34.66 | 29.33 |
| PGSC0003DMT400009096 | Potato | endoplasmic reticulum, golgi, vacuole | 67.9 | 28.28 |
| Solyc02g084720.2.1 | Tomato | endoplasmic reticulum, golgi, vacuole | 67.33 | 28.05 |
| EER92805 | Sorghum | vacuole | 61.36 | 25.65 |
| GSMUA_Achr9P21610_001 | Banana | extracellular, golgi | 61.93 | 25.56 |
| GSMUA_Achr4P13580_001 | Banana | golgi, vacuole | 62.78 | 25.46 |
| TraesCS4A01G022500.2 | Wheat | golgi, vacuole | 59.94 | 25.0 |
| TraesCS4B01G280900.1 | Wheat | golgi, vacuole | 59.94 | 24.97 |
| Os03t0165400-01 | Rice | vacuole | 59.66 | 24.97 |
| TraesCS4D01G279400.4 | Wheat | vacuole | 59.94 | 24.88 |
| HORVU4Hr1G074280.4 | Barley | vacuole | 59.66 | 24.79 |
| Zm00001d048440_P003 | Maize | vacuole | 60.51 | 24.51 |
| Zm00001d027803_P002 | Maize | golgi, plasma membrane, vacuole | 61.08 | 23.42 |
| CDX97513 | Canola | golgi, vacuole | 54.26 | 22.74 |
| CDY23637 | Canola | golgi, vacuole | 53.98 | 22.65 |
| CDY51738 | Canola | golgi, vacuole | 53.69 | 22.53 |
| CDY37486 | Canola | golgi, vacuole | 53.12 | 22.29 |
| CDY36028 | Canola | plastid | 43.18 | 21.35 |
| CDY53959 | Canola | golgi, vacuole | 44.03 | 21.23 |
| CDY47949 | Canola | golgi, vacuole | 43.47 | 20.96 |
| CDY69031 | Canola | cytosol, plastid, vacuole | 36.36 | 20.61 |
| CDX76254 | Canola | golgi, nucleus, vacuole | 34.09 | 20.41 |
| CDY70118 | Canola | cytosol | 31.53 | 18.69 |
| CDY15749 | Canola | golgi, vacuole | 43.75 | 18.25 |
| CDX83288 | Canola | golgi, vacuole | 43.75 | 18.22 |
| CDY31204 | Canola | golgi, vacuole | 43.47 | 18.13 |
| CDY04567 | Canola | golgi, vacuole | 43.18 | 17.88 |
| CDX89360 | Canola | mitochondrion | 34.38 | 17.31 |
| CDY43756 | Canola | cytosol, nucleus, peroxisome | 25.0 | 17.25 |
| CDY11899 | Canola | golgi, vacuole | 35.23 | 17.17 |
| CDX92753 | Canola | golgi, vacuole | 34.09 | 16.85 |
| CDY42755 | Canola | vacuole | 34.09 | 16.85 |
| CDX94367 | Canola | mitochondrion | 33.81 | 16.71 |
| CDY32919 | Canola | golgi, vacuole | 34.09 | 16.62 |
| CDX95380 | Canola | vacuole | 34.09 | 16.51 |
| CDY20708 | Canola | golgi, vacuole | 33.52 | 16.34 |
| CDY65885 | Canola | vacuole | 37.5 | 16.08 |
| CDX93659 | Canola | vacuole | 36.93 | 15.89 |
| CDX67790 | Canola | vacuole | 36.36 | 15.71 |
| CDY19166 | Canola | golgi, vacuole | 38.64 | 15.32 |
| CDY23785 | Canola | vacuole | 38.64 | 15.23 |
| CDY31414 | Canola | cytosol, golgi, mitochondrion, peroxisome | 31.25 | 14.1 |
| CDY34975 | Canola | golgi, plasma membrane, vacuole | 31.53 | 14.09 |
| CDY28339 | Canola | vacuole | 31.53 | 14.09 |
| CDY32304 | Canola | cytosol | 34.09 | 13.61 |
| CDY43757 | Canola | golgi, vacuole | 28.41 | 13.5 |
| CDX84446 | Canola | golgi, vacuole | 28.12 | 13.36 |
| CDX69103 | Canola | vacuole | 31.53 | 13.15 |
| CDX75479 | Canola | vacuole | 31.53 | 13.14 |
| CDY40650 | Canola | vacuole | 31.25 | 13.03 |
| CDX72512 | Canola | vacuole | 31.25 | 13.03 |
| CDX72747 | Canola | vacuole | 31.25 | 12.42 |
| CDX84445 | Canola | vacuole | 24.72 | 12.08 |
| CDY02241 | Canola | golgi, vacuole | 32.95 | 11.73 |
| CDY22419 | Canola | cytosol | 30.97 | 11.4 |
| CDY39845 | Canola | vacuole | 23.3 | 11.39 |
| CDY53917 | Canola | plastid | 31.82 | 10.88 |
| CDY31349 | Canola | vacuole | 22.73 | 10.8 |
| CDX89744 | Canola | vacuole | 32.95 | 10.68 |
| CDY70160 | Canola | vacuole | 6.82 | 4.4 |
| CDX67763 | Canola | golgi, plasma membrane, vacuole | 4.26 | 1.95 |
| CDX76255 | Canola | extracellular | 0.0 | 0.0 |
| CDX88594 | Canola | golgi, vacuole | 0.0 | 0.0 |
| CDX98327 | Canola | golgi, vacuole | 0.0 | 0.0 |
Protein Annotations
| KEGG:00052+3.2.1.23 | KEGG:00511+3.2.1.23 | KEGG:00531+3.2.1.23 | KEGG:00600+3.2.1.23 | KEGG:00604+3.2.1.23 | Gene3D:2.60.120.260 |
| Gene3D:2.60.120.740 | MapMan:35.1 | GO:A0A078J245 | UniProt:A0A078J245 | EnsemblPlants:CDY59691 | ProteinID:CDY59691 |
| ProteinID:CDY59691.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00027600001 | InterPro:Galactose-bd-like_sf |
| InterPro:Glycoside_Hdrlase_35 | InterPro:IPR000922 | InterPro:IPR008979 | InterPro:Lectin_gal-bd_dom | PFAM:PF02140 | PRINTS:PR00742 |
| PFscan:PS50228 | PANTHER:PTHR23421 | PANTHER:PTHR23421:SF79 | MetaCyc:PWY-6807 | SUPFAM:SSF49785 | UniParc:UPI0004EE5D9D |
Description
BnaC07g51100DBnaC07g51100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J245]
Coordinates
chrLK033796:-:8762..10463
Molecular Weight (calculated)
39035.4 Da
IEP (calculated)
9.228
GRAVY (calculated)
-0.436
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGVDIGETE SFLHGGELPT LIVQSTCHAV HIFVNGQLSG SAFGTRQNRR FTYRGKINLH SGTNRIALLS VAVGLPNVGG HFESWNTGIL GPVALHSLSQ
101: GKRDLSWQKW TYQVELRGEA MNLAYPTNTL SIGWMDTSLT VQKPQPLTWH KTYFDAPEGD EPLALDMEGM GKGQIWVNGE SIGRYWTAFA TGDCNHCSYT
201: GTYKPNKCLS GCGQPTQRYY HVPRSWLKPS QNLLFLNHHH PNIKNWHLES YGKGQTFHRP KVHLKWSPGQ ANSAIKFASF GTPLGKCGRY QQGECHAATS
301: YAILERKCVG KARCAVTISN TNFGKDPCPN VLKRLTVEAV CSPETSLTSW KP
101: GKRDLSWQKW TYQVELRGEA MNLAYPTNTL SIGWMDTSLT VQKPQPLTWH KTYFDAPEGD EPLALDMEGM GKGQIWVNGE SIGRYWTAFA TGDCNHCSYT
201: GTYKPNKCLS GCGQPTQRYY HVPRSWLKPS QNLLFLNHHH PNIKNWHLES YGKGQTFHRP KVHLKWSPGQ ANSAIKFASF GTPLGKCGRY QQGECHAATS
301: YAILERKCVG KARCAVTISN TNFGKDPCPN VLKRLTVEAV CSPETSLTSW KP
001: MGTTILVLSK ILTFLLTTML IGSSVIQCSS VTYDKKAIVI NGHRRILLSG SIHYPRSTPE MWEDLIKKAK DGGLDVIDTY VFWNGHEPSP GTYNFEGRYD
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
101: LVRFIKTIQE VGLYVHLRIG PYVCAEWNFG GFPVWLKYVD GISFRTDNGP FKSAMQGFTE KIVQMMKEHR FFASQGGPII LSQIENEFEP DLKGLGPAGH
201: SYVNWAAKMA VGLNTGVPWV MCKEDDAPDP IINTCNGFYC DYFTPNKPYK PTMWTEAWSG WFTEFGGTVP KRPVEDLAFG VARFIQKGGS YINYYMYHGG
301: TNFGRTAGGP FITTSYDYDA PIDEYGLVQE PKYSHLKQLH QAIKQCEAAL VSSDPHVTKL GNYEEAHVFT AGKGSCVAFL TNYHMNAPAK VVFNNRHYTL
401: PAWSISILPD CRNVVFNTAT VAAKTSHVQM VPSGSILYSV ARYDEDIATY GNRGTITARG LLEQVNVTRD TTDYLWYTTS VDIKASESFL RGGKWPTLTV
501: DSAGHAVHVF VNGHFYGSAF GTRENRKFSF SSQVNLRGGA NKIALLSVAV GLPNVGPHFE TWATGIVGSV VLHGLDEGNK DLSWQKWTYQ AGLRGESMNL
601: VSPTEDSSVD WIKGSLAKQN KQPLTWYKAY FDAPRGNEPL ALDLKSMGKG QAWINGQSIG RYWMAFAKGD CGSCNYAGTY RQNKCQSGCG EPTQRWYHVP
701: RSWLKPKGNL LVLFEELGGD ISKVSVVKRS VN
Arabidopsis Description
BGAL5Beta-galactosidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAJ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.