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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76255 Canola extracellular 29.48 57.81
Os06t0628500-00 Rice extracellular, golgi, vacuole 62.15 53.06
CDX88594 Canola golgi, vacuole 61.75 47.69
CDY70160 Canola vacuole 95.62 44.04
CDX67763 Canola golgi, plasma membrane, vacuole 96.02 31.26
CDY28339 Canola vacuole 98.01 31.22
CDY34975 Canola golgi, plasma membrane, vacuole 97.61 31.09
CDX67790 Canola vacuole 96.81 29.82
HORVU2Hr1G057440.2 Barley vacuole 62.15 29.77
CDX93659 Canola vacuole 94.42 28.97
AT1G31740.1 Thale cress vacuole 88.45 28.5
CDY65885 Canola vacuole 90.04 27.53
GSMUA_Achr4P25980_001 Banana extracellular, golgi, vacuole 66.14 26.82
CDY32304 Canola cytosol 88.45 25.17
Solyc07g042220.1.1 Tomato unclear 77.29 23.72
VIT_11s0016g00680.t01 Wine grape vacuole 75.7 22.75
KRH19351 Soybean extracellular, golgi, vacuole 74.9 22.73
CDY53917 Canola plastid 92.83 22.64
GSMUA_Achr5P11870_001 Banana extracellular, golgi 70.52 22.55
KRH02579 Soybean extracellular, golgi, vacuole 74.1 22.04
GSMUA_Achr4P26030_001 Banana cytosol, peroxisome, vacuole 46.22 21.89
PGSC0003DMT400059880 Potato cytosol 66.14 21.56
CDY11899 Canola golgi, vacuole 61.75 21.47
CDX95380 Canola vacuole 61.75 21.32
CDX94367 Canola mitochondrion 59.36 20.93
CDY32919 Canola golgi, vacuole 60.16 20.91
CDY20708 Canola golgi, vacuole 60.16 20.91
CDY39845 Canola vacuole 59.36 20.69
CDY36028 Canola plastid 58.57 20.65
CDX84445 Canola vacuole 58.57 20.42
CDY53959 Canola golgi, vacuole 59.36 20.41
CDY47949 Canola golgi, vacuole 58.96 20.27
CDY31349 Canola vacuole 59.36 20.11
CDX92753 Canola golgi, vacuole 56.97 20.08
CDY42755 Canola vacuole 56.18 19.8
GSMUA_Achr2P21790_001 Banana golgi, vacuole 66.14 19.74
GSMUA_Achr5P11850_001 Banana extracellular, golgi 69.72 19.49
Os10t0330600-01 Rice extracellular 62.95 19.08
CDY31204 Canola golgi, vacuole 64.14 19.08
CDY15749 Canola golgi, vacuole 64.14 19.08
HORVU1Hr1G003210.2 Barley golgi, vacuole 62.55 18.98
Zm00001d043393_P001 Maize extracellular 62.15 18.98
TraesCS1A01G024100.1 Wheat vacuole 62.55 18.96
HORVU1Hr1G003200.1 Barley golgi, vacuole 62.55 18.92
Os10t0340600-01 Rice extracellular, golgi, vacuole 62.15 18.84
CDY04567 Canola golgi, vacuole 63.74 18.82
CDX83288 Canola golgi, vacuole 63.35 18.82
TraesCS1D01G024200.1 Wheat vacuole 61.75 18.7
EES03081 Sorghum extracellular 61.35 18.55
TraesCS1B01G030400.1 Wheat vacuole 61.35 18.53
CDX97513 Canola golgi, vacuole 61.35 18.33
CDY23637 Canola golgi, vacuole 60.96 18.24
CDY51738 Canola golgi, vacuole 60.56 18.12
CDY43757 Canola golgi, vacuole 53.39 18.08
CDY37486 Canola golgi, vacuole 60.16 18.0
CDX84446 Canola golgi, vacuole 52.99 17.95
CDX89360 Canola mitochondrion 48.61 17.45
CDX75569 Canola golgi, vacuole 57.37 17.41
CDX69219 Canola vacuole 56.18 17.11
CDY59693 Canola vacuole 56.97 16.71
CDX75479 Canola vacuole 52.59 15.62
CDX69103 Canola vacuole 52.19 15.52
CDY19166 Canola golgi, vacuole 53.78 15.2
CDY23785 Canola vacuole 53.39 15.01
CDY40650 Canola vacuole 49.8 14.81
CDX72512 Canola vacuole 49.8 14.81
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 43.03 13.85
CDX72747 Canola vacuole 48.21 13.66
CDY22419 Canola cytosol 49.0 12.87
CDX76254 Canola golgi, nucleus, vacuole 29.48 12.59
CDY02241 Canola golgi, vacuole 49.4 12.54
CDX89744 Canola vacuole 49.4 11.42
CDY69031 Canola cytosol, plastid, vacuole 20.72 8.37
CDY43756 Canola cytosol, nucleus, peroxisome 13.15 6.47
CDY70118 Canola cytosol 4.38 1.85
CDY59725 Canola cytosol 0.4 0.32
CDY59691 Canola cytosol, nucleus, vacuole 0.0 0.0
CDY69471 Canola cytosol 0.0 0.0
CDY70594 Canola cytosol 0.0 0.0
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23MapMan:21.3.2.2.2
Gene3D:3.20.20.80GO:A0A078EBE0EnsemblPlants:CDX98327ProteinID:CDX98327ProteinID:CDX98327.1GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00105872001InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFPFAM:PF01301
PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF88MetaCyc:PWY-6807SUPFAM:SSF51445
SignalP:SignalP-noTMUniParc:UPI0004EBCB05SEG:seg:::
Description
BnaC06g16880D
Coordinates
chrLK031904:+:602096..603526
Molecular Weight (calculated)
28757.6 Da
IEP (calculated)
6.013
GRAVY (calculated)
-0.223
Length
251 amino acids
Sequence
(BLAST)
001: MVFLRFLLCF LFVSSVYATI VSHDGRAITI DGHRRVLLSG SIHYPRSTPE MWPDLIKKGK EGGLDAIETY VFWNAHEPTR RQYDFSGKLD LIRFLKTIQD
101: EGLYGVLRIG PYACAEWNYG GFPVWLHNMP GMVFRTTNKA FMDEMQNFTT MIVDMVKKEN LFASQGGPII LAQIENEYGN VMGPYGESGK EYIKWCANMA
201: QSLDVGVPWI MCQQNDAPQP MLNTCNGFYC DNFVPNNPNT PKMWTENWTG W
Best Arabidopsis Sequence Match ( AT1G31740.1 )
(BLAST)
001: MVSLSFILCC VLVSSCAYAT IVSHDGRAIT IDGHRRVLLS GSIHYPRSTT EMWPDLIKKG KEGSLDAIET YVFWNAHEPT RRQYDFSGNL DLIRFLKTIQ
101: NEGMYGVLRI GPYVCAEWNY GGFPVWLHNM PGMEFRTTNT AFMNEMQNFT TMIVEMVKKE KLFASQGGPI ILAQIENEYG NVIGSYGEAG KAYIQWCANM
201: ANSLDVGVPW IMCQQDDAPQ PMLNTCNGYY CDNFSPNNPN TPKMWTENWT GWYKNWGGKD PHRTTEDVAF AVARFFQKEG TFQNYYMYHG GTNFDRTAGG
301: PYITTTYDYD APLDEFGNLN QPKYGHLKQL HDVLHAMEKT LTYGNISTVD FGNLVTATVY QTEEGSSCFI GNVNETSDAK INFQGTSYDV PAWSVSILPD
401: CKTETYNTAK INTQTSVMVK KANEAENEPS TLKWSWRPEN IDSVLLKGKG ESTMRQLFDQ KVVSNDESDY LWYMTTVNLK EQDPVLGKNM SLRINSTAHV
501: LHAFVNGQHI GNYRVENGKF HYVFEQDAKF NPGANVITLL SITVGLPNYG AFFENFSAGI TGPVFIIGRN GDETIVKDLS THKWSYKTGL SGFENQLFSS
601: ESPSTWSAPL GSEPVVVDLL GLGKGTAWIN GNNIGRYWPA FLSDIDGCSA EYHVPRSFLN SEGDNTLVLF EEIGGNPSLV NFQTIGVGSV CANVYEKNVL
701: ELSCNGKPIS AIKFASFGNP GGDCGSFEKG TCEASNNAAA ILTQECVGKE KCSIDVSEDK FGAAECGALA KRLAVEAIC
Arabidopsis Description
BGAL15Beta-galactosidase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6W4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.