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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 6
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX76255 Canola extracellular 17.33 98.44
CDX76254 Canola golgi, nucleus, vacuole 79.37 98.13
CDX88594 Canola golgi, vacuole 37.14 83.08
CDX94367 Canola mitochondrion 78.54 80.2
AT3G52840.2 Thale cress golgi, vacuole 85.42 79.51
CDY11899 Canola golgi, vacuole 78.95 79.5
CDX92753 Canola golgi, vacuole 77.58 79.21
CDY42755 Canola vacuole 76.89 78.51
CDY69471 Canola cytosol 44.15 77.16
CDY70594 Canola cytosol 43.88 76.68
CDY32919 Canola golgi, vacuole 75.93 76.45
CDX89360 Canola mitochondrion 73.31 76.25
CDY20708 Canola golgi, vacuole 74.97 75.48
PGSC0003DMT400000899 Potato nucleus, peroxisome, vacuole 64.1 69.55
KRH12385 Soybean vacuole 68.36 68.93
KRH37385 Soybean nucleus 68.23 68.79
Solyc12g008840.1.1 Tomato extracellular 67.95 68.23
GSMUA_Achr7P08970_001 Banana vacuole 66.99 66.71
GSMUA_Achr6P00880_001 Banana golgi, vacuole 66.16 65.53
Zm00001d046357_P001 Maize extracellular 64.79 65.24
EER88554 Sorghum golgi, vacuole 64.92 65.1
GSMUA_Achr7P08950_001 Banana golgi, vacuole 65.34 64.54
Os06t0573600-01 Rice plasma membrane, vacuole 63.41 64.48
GSMUA_Achr7P08960_001 Banana endoplasmic reticulum, golgi, vacuole 65.2 64.4
TraesCS7B01G264200.1 Wheat plasma membrane, vacuole 63.55 64.35
GSMUA_Achr7P08940_001 Banana vacuole 64.79 64.34
TraesCS7D01G359500.1 Wheat golgi 63.27 64.16
TraesCS6A01G185400.1 Wheat golgi, vacuole 63.69 63.95
TraesCS6D01G172400.1 Wheat golgi, vacuole 63.27 63.45
TraesCS7A01G363600.1 Wheat plasma membrane, vacuole 62.59 63.37
TraesCS6B01G214100.1 Wheat golgi, vacuole 63.14 63.31
EES06516 Sorghum mitochondrion, plastid 63.55 62.43
CDY36028 Canola plastid 60.8 62.08
HORVU7Hr1G086690.2 Barley plasma membrane, vacuole 63.69 61.98
CDX98327 Canola golgi, vacuole 21.32 61.75
Os02t0219200-01 Rice peroxisome, vacuole 42.23 61.4
CDY53959 Canola golgi, vacuole 60.94 60.68
HORVU6Hr1G039490.6 Barley plastid 63.69 60.6
CDY47949 Canola golgi, vacuole 60.8 60.55
VIT_11s0016g02200.t01 Wine grape vacuole 68.5 59.57
KRH02714 Soybean golgi, vacuole 68.23 59.12
KRH19154 Soybean golgi, mitochondrion, plastid, vacuole 68.09 59.0
CDY23637 Canola golgi, vacuole 66.99 58.05
CDX97513 Canola golgi, vacuole 66.99 57.98
CDY51738 Canola golgi, vacuole 66.58 57.69
CDY37486 Canola golgi, vacuole 65.75 56.97
GSMUA_Achr2P16780_001 Banana plastid 65.89 56.96
Zm00001d044290_P005 Maize golgi, vacuole 64.92 56.87
OQU87043 Sorghum golgi, vacuole 64.65 56.83
TraesCS3A01G208600.1 Wheat plastid 65.06 56.65
HORVU3Hr1G050450.12 Barley golgi, vacuole 64.65 56.56
TraesCS3D01G211500.2 Wheat golgi, vacuole 64.92 56.53
Os01t0580200-01 Rice golgi, vacuole 64.24 56.47
GSMUA_Achr6P35850_001 Banana golgi, vacuole 63.69 56.19
TraesCS3B01G235100.1 Wheat golgi, vacuole 64.51 56.03
Zm00001d053585_P002 Maize plastid 63.55 55.73
CDX75569 Canola golgi, vacuole 59.42 52.24
CDX69219 Canola vacuole 58.73 51.82
CDY59693 Canola vacuole 59.7 50.7
CDY70160 Canola vacuole 37.83 50.46
CDX84446 Canola golgi, vacuole 51.03 50.07
CDY43757 Canola golgi, vacuole 50.76 49.8
CDY39845 Canola vacuole 47.59 48.06
CDY15749 Canola golgi, vacuole 55.57 47.87
CDY04567 Canola golgi, vacuole 54.75 46.82
CDY31204 Canola golgi, vacuole 54.2 46.68
CDX84445 Canola vacuole 46.22 46.67
CDX83288 Canola golgi, vacuole 54.2 46.63
CDY31349 Canola vacuole 47.46 46.56
PGSC0003DMT400011458 Potato cytosol, nucleus, peroxisome 28.47 46.31
CDX93659 Canola vacuole 49.24 43.77
CDY43756 Canola cytosol, nucleus, peroxisome 30.67 43.73
CDY28339 Canola vacuole 47.18 43.53
CDY34975 Canola golgi, plasma membrane, vacuole 47.18 43.53
CDX67790 Canola vacuole 48.69 43.44
CDY65885 Canola vacuole 48.97 43.36
CDY23785 Canola vacuole 52.13 42.44
CDY19166 Canola golgi, vacuole 51.72 42.34
CDY59725 Canola cytosol 17.88 41.67
CDY32304 Canola cytosol 46.77 38.55
CDY69031 Canola cytosol, plastid, vacuole 32.87 38.49
CDX75479 Canola vacuole 43.74 37.63
CDX69103 Canola vacuole 43.6 37.56
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 40.03 37.31
CDX72512 Canola vacuole 42.78 36.85
CDY40650 Canola vacuole 42.78 36.85
CDX72747 Canola vacuole 43.33 35.55
CDX67763 Canola golgi, plasma membrane, vacuole 36.73 34.63
CDY59691 Canola cytosol, nucleus, vacuole 16.51 34.09
CDY22419 Canola cytosol 43.33 32.95
CDY53917 Canola plastid 46.49 32.85
CDY70118 Canola cytosol 26.0 31.82
CDY02241 Canola golgi, vacuole 42.92 31.55
CDX89744 Canola vacuole 43.05 28.82
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078E138EnsemblPlants:CDX95380ProteinID:CDX95380ProteinID:CDX95380.1
GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00101093001InterPro:Galactose-bd-like_sfInterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35
InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421
PANTHER:PTHR23421:SF63MetaCyc:PWY-6807SUPFAM:SSF49785SUPFAM:SSF51445SignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI0004EED624:::::
Description
BnaC04g27780D
Coordinates
chrLK031888:+:846595..853007
Molecular Weight (calculated)
81520.2 Da
IEP (calculated)
8.065
GRAVY (calculated)
-0.271
Length
727 amino acids
Sequence
(BLAST)
001: MVINFRDKAW IFLAIMCFSL LICSTKALVS YDHKALIING QKRILLSGSI HYPRSTPEMW PDLIKKAQEG GLDVIQTYVF WNGHEPSPGQ YYFGDRYDLV
101: RFIKLVQQAG LYVSLRIGPY VCAEWNFGGI PVWLKYVPGM VFRTDNGPFK TAMQKFTKKI VDIMKEEKLF ETQGGPIILS QIENEYGPME WEIGSAGKAY
201: TKWTAAMALG LSTGVPWVMC KQDDAPYPII NTCNGFYCEG FKPNSVDQPK MWTENWTGWF TEFGGAIPNR PVEDLAFSVA RFIQNGGSFM NYYMYHGGTN
301: FDRTSGEFIT TSYDYDAPLD EYGLLREPKY SHLKELHKVI KLCEPALVSV DPTINSLGNK QEAHVFKSKT SCAAFLSNYD TSYAAKVMFR GFPYDLPPWS
401: ISILPDCKTE YHNTAKIRSP SILMKMVPTS TRFSWESYNE AIPSSGDYGT FARDGFLEQI SMTRDKTDYF WYLTDITISS NEGFLKTGED PLLTICSAGH
501: ALHVFVNGQL AGTSYGALSS PKLTFSQRIK LREGVNKLAI LSTAVGLPDA GVHYETWNTG VLGPATLNGV NSGAWDMSKW KWSYKIGTKG EAMSLHTTTG
601: SSSVEWTEGS FVAVKQPLTW YKSSFNAPVG NEPLALDMNT MGKGQVWVNG HNIGRQWPAY TAHGNCGRCN YAGIYNEKKC LSNCGQSSQR WYHVPRSWLK
701: PSGNLLVVFE EWGGDPSGIS VVKRTNK
Best Arabidopsis Sequence Match ( AT3G52840.2 )
(BLAST)
001: MYSDISVSLY IYVHIASRFS FIPITELIIS AEYLLFFIKK QKNIERFGFS KNVKMSMHFR NKAWIILAIL CFSSLIHSTE AVVTYDHKAL IINGQRRILI
101: SGSIHYPRST PEMWPDLIKK AKEGGLDVIQ TYVFWNGHEP SPGNYYFQDR YDLVKFTKLV HQAGLYLDLR IGPYVCAEWN FGGFPVWLKY VPGMVFRTDN
201: EPFKIAMQKF TKKIVDMMKE EKLFETQGGP IILSQIENEY GPMQWEMGAA GKAYSKWTAE MALGLSTGVP WIMCKQEDAP YPIIDTCNGF YCEGFKPNSD
301: NKPKLWTENW TGWFTEFGGA IPNRPVEDIA FSVARFIQNG GSFMNYYMYY GGTNFDRTAG VFIATSYDYD APIDEYGLLR EPKYSHLKEL HKVIKLCEPA
401: LVSVDPTITS LGDKQEIHVF KSKTSCAAFL SNYDTSSAAR VMFRGFPYDL PPWSVSILPD CKTEYYNTAK IRAPTILMKM IPTSTKFSWE SYNEGSPSSN
501: EAGTFVKDGL VEQISMTRDK TDYFWYFTDI TIGSDESFLK TGDNPLLTIF SAGHALHVFV NGLLAGTSYG ALSNSKLTFS QNIKLSVGIN KLALLSTAVG
601: LPNAGVHYET WNTGILGPVT LKGVNSGTWD MSKWKWSYKI GLRGEAMSLH TLAGSSAVKW WIKGFVVKKQ PLTWYKSSFD TPRGNEPLAL DMNTMGKGQV
701: WVNGHNIGRH WPAYTARGNC GRCNYAGIYN EKKCLSHCGE PSQRWYHVPR SWLKPFGNLL VIFEEWGGDP SGISLVKRTA K
Arabidopsis Description
BGAL2Beta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A1I9LM56]
SUBAcon: [golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.