Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY31349 Canola vacuole 96.94 94.2
CDX84445 Canola vacuole 88.47 88.47
CDY43756 Canola cytosol, nucleus, peroxisome 62.08 87.65
AT5G63800.1 Thale cress vacuole 87.36 87.6
VIT_07s0031g02590.t01 Wine grape extracellular, golgi, vacuole 44.03 68.76
KRH40964 Soybean golgi, vacuole 62.92 64.35
KRH53958 Soybean golgi, vacuole 62.36 62.62
KRH63978 Soybean golgi, vacuole 61.25 61.51
CDX88594 Canola golgi, vacuole 26.81 59.38
CDX98327 Canola golgi, vacuole 20.69 59.36
CDX76255 Canola extracellular 10.14 57.03
HORVU3Hr1G081980.9 Barley cytosol, vacuole 52.64 50.27
Os05t0428100-00 Rice golgi, vacuole 54.44 48.34
GSMUA_Achr11P... Banana golgi, vacuole 54.72 48.23
Zm00001d010212_P002 Maize endoplasmic reticulum, extracellular, golgi 54.44 47.8
TraesCS3A01G386100.3 Wheat vacuole 55.14 47.77
TraesCS1A01G267700.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.58 47.69
CDX95380 Canola vacuole 48.06 47.59
TraesCS3B01G418200.1 Wheat vacuole 55.0 47.54
TraesCS1D01G267600.2 Wheat endoplasmic reticulum, extracellular, vacuole 53.89 47.32
CDY11899 Canola golgi, vacuole 47.36 47.23
HORVU1Hr1G065290.7 Barley vacuole 53.89 47.2
CDX94367 Canola mitochondrion 46.67 47.19
KXG22057 Sorghum vacuole 54.72 47.13
TraesCS1B01G278400.1 Wheat plastid 53.89 47.09
Zm00001d042656_P001 Maize golgi, vacuole 45.69 46.87
TraesCS3D01G379100.3 Wheat vacuole 55.14 46.76
CDY20708 Canola golgi, vacuole 46.81 46.68
CDY32919 Canola golgi, vacuole 46.67 46.54
CDX92753 Canola golgi, vacuole 45.56 46.07
CDY42755 Canola vacuole 45.42 45.93
CDY70160 Canola vacuole 34.58 45.69
CDY36028 Canola plastid 44.72 45.22
CDY47949 Canola golgi, vacuole 45.69 45.07
CDX76254 Canola golgi, nucleus, vacuole 36.81 45.07
CDY53959 Canola golgi, vacuole 45.42 44.79
CDX89360 Canola mitochondrion 42.64 43.92
CDX84446 Canola golgi, vacuole 44.72 43.45
CDY43757 Canola golgi, vacuole 44.72 43.45
CDY51738 Canola golgi, vacuole 48.61 41.72
CDX97513 Canola golgi, vacuole 48.61 41.67
CDY23637 Canola golgi, vacuole 48.33 41.48
CDY37486 Canola golgi, vacuole 48.06 41.24
CDY59693 Canola vacuole 48.47 40.77
CDX75569 Canola golgi, vacuole 46.81 40.75
CDY04567 Canola golgi, vacuole 47.92 40.59
CDX69219 Canola vacuole 46.39 40.53
CDY15749 Canola golgi, vacuole 47.5 40.52
CDX75479 Canola vacuole 47.08 40.12
CDY31204 Canola golgi, vacuole 46.94 40.05
CDX69103 Canola vacuole 46.94 40.05
CDX83288 Canola golgi, vacuole 46.94 40.0
CDY31414 Canola cytosol, golgi, mitochondrion, peroxisome 42.78 39.49
CDY40650 Canola vacuole 45.69 38.98
CDX72512 Canola vacuole 45.69 38.98
CDY34975 Canola golgi, plasma membrane, vacuole 42.22 38.58
CDY28339 Canola vacuole 42.22 38.58
CDY65885 Canola vacuole 43.75 38.37
CDX67790 Canola vacuole 43.19 38.16
CDX93659 Canola vacuole 42.92 37.78
CDY70594 Canola cytosol 21.81 37.74
CDY69471 Canola cytosol 21.53 37.26
CDY19166 Canola golgi, vacuole 45.69 37.05
CDY23785 Canola vacuole 45.69 36.84
CDX72747 Canola vacuole 45.0 36.57
CDY22419 Canola cytosol 45.28 34.1
CDY32304 Canola cytosol 41.39 33.79
CDY70118 Canola cytosol 27.64 33.5
CDY02241 Canola golgi, vacuole 45.42 33.06
CDY69031 Canola cytosol, plastid, vacuole 27.64 32.05
CDX67763 Canola golgi, plasma membrane, vacuole 33.19 31.0
CDX89744 Canola vacuole 45.69 30.29
CDY59725 Canola cytosol 13.06 30.13
CDY53917 Canola plastid 42.08 29.45
CDY59691 Canola cytosol, nucleus, vacuole 11.39 23.3
Protein Annotations
KEGG:00052+3.2.1.23KEGG:00511+3.2.1.23KEGG:00531+3.2.1.23KEGG:00600+3.2.1.23KEGG:00604+3.2.1.23Gene3D:2.60.120.260
MapMan:21.3.2.2.2Gene3D:3.20.20.80GO:A0A078HMU7UniProt:A0A078HMU7EnsemblPlants:CDY39845ProteinID:CDY39845
ProteinID:CDY39845.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0004565GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798EnsemblPlantsGene:GSBRNA2T00068669001InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_catInterPro:Glyco_hydro_35_CSInterPro:Glycoside_Hdrlase_35InterPro:Glycoside_hydrolase_SFInterPro:IPR008979PFAM:PF01301
PRINTS:PR00742ScanProsite:PS01182PANTHER:PTHR23421PANTHER:PTHR23421:SF73MetaCyc:PWY-6807SUPFAM:SSF49785
SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EE18BC:::
Description
BnaC02g42730DBeta-galactosidase [Source:UniProtKB/TrEMBL;Acc:A0A078HMU7]
Coordinates
chrLK032458:-:197386..203896
Molecular Weight (calculated)
79723.5 Da
IEP (calculated)
8.572
GRAVY (calculated)
-0.216
Length
720 amino acids
Sequence
(BLAST)
001: MMSGRVASCW ILVAMVVVLS TAPAGGDTAE KGVTYDGRSL IIDGQRKLLF SGSIHYPRST PEMWPSLIKK TKEGGIDVIQ TYVFWNLHEP KLGQYDFSGR
101: NDLVKFIKEI RSQGLYVCLR IGPFVEAEWN YGGLPFWLRD VPGMVYRTDN EPFKFHMQKF TSKIVNLMKS EGLYASQGGP IILSQIENEY GNVEAAFHEK
201: GASYVKWAAQ MAVGLQTGVP WIMCKQPDAP DPVINTCNGM RCGETFPGPN SPNKPKMWTE DWTSFYQFYG GTPYIRSAED IAFHAALFIA KNGSYINYYM
301: YHGGTNFGRT SSSYFITGYY DQAPLDEYGL LRQPKYGHLK ELHAAIKSSA NPLLQGKQTI LSLGPMQQAY VFEDENSGCV AFLVNNDARK AIQIQFRNNA
401: YSLLPKSIGI LQNCKNLIYE TAKVNVAKNM RVTTPVQVFN VPDKWEVFRE SIPTFSDTPL KTKALLEHTN LTKDKSDYLW YTLRFESSSP CANPSLYIES
501: LGHVVHVFVN HALAGSGHGS RNITVVKLQV PVSLINGQNN ISILSGMVGL PDSGAYMERK SYGLTKAQIS CGGTNAIDLS GSQWGYLVGL VGDKVKLHQW
601: ANLKSVKRST NDAGLIKNCP LAWYKTMFDE PNGDGPVGLN MGSMGKGEVW VNGESIGRYW VSFLTPAGHP SQSIYHIPRA FLKPSGNLLV VFEEEGGDPL
701: GISLNTISVI GSNKAQSQLS
Best Arabidopsis Sequence Match ( AT5G63800.1 )
(BLAST)
001: MEMGRLVFGL CLILIVGTFL EFSGGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN
101: DLVKFIKEIR SQGLYVCLRI GPFIEAEWNY GGLPFWLRDV PGMVYRTDNE PFKFHMQKFT AKIVDLMKSE GLYASQGGPI ILSQIENEYA NVEGAFHEKG
201: ASYIKWAGQM AVGLKTGVPW IMCKSPDAPD PVINTCNGMK CGETFPGPNS PNKPKMWTED WTSFFQVYGK EPYIRSAEDI AFHAALFVAK NGSYINYYMY
301: HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKSSAN PLLQGKQTIL SLGPMQQAYV FEDANNGCVA FLVNNDAKAS QIQFRNNAYS
401: LSPKSIGILQ NCKNLIYETA KVNVKMNTRV TTPVQVFNVP DNWNLFRETI PAFPGTSLKT NALLEHTNLT KDKTDYLWYT SSFKLDSPCT NPSIYTESSG
501: HVVHVFVNNA LAGSGHGSRD IRVVKLQAPV SLINGQNNIS ILSGMVGLPD SGAYMERRSY GLTKVQISCG GTKPIDLSRS QWGYSVGLLG EKVRLYQWKN
601: LNRVKWSMNK AGLIKNRPLA WYKTTFDGPN GDGPVGLHMS SMGKGEIWVN GESIGRYWVS FLTPAGQPSQ SIYHIPRAFL KPSGNLLVVF EEEGGDPLGI
701: SLNTISVVGS SQAQSQFS
Arabidopsis Description
BGAL6Beta-galactosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN4]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.