Factsheet for TraesCS3B01G418200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G386100.3	Wheat	vacuole	94.6	94.83
TraesCS3D01G379100.3	Wheat	vacuole	95.56	93.76
HORVU3Hr1G081980.9	Barley	cytosol, vacuole	84.27	93.1
Zm00001d042656_P001	Maize	golgi, vacuole	64.35	76.35
TraesCS1B01G278400.1	Wheat	plastid	70.59	71.36
VIT_07s0031g02590.t01	Wine grape	extracellular, golgi, vacuole	32.53	58.79
GSMUA_Achr11P...	Banana	golgi, vacuole	56.9	58.02
Bra024237.1-P	Field mustard	vacuole	33.85	56.29
KRH40964	Soybean	golgi, vacuole	47.18	55.82
AT5G63800.1	Thale cress	vacuole	47.42	55.01
Bra029200.1-P	Field mustard	vacuole	47.54	55.0
CDY39845	Canola	vacuole	47.54	55.0
Solyc11g018500.1.1	Tomato	cytosol, golgi, vacuole	45.74	54.82
KRH53958	Soybean	golgi, vacuole	47.18	54.81
KRH63978	Soybean	golgi, vacuole	47.18	54.81
KRH53267	Soybean	golgi, vacuole	45.74	54.66
CDX84445	Canola	vacuole	47.06	54.44
KRH64633	Soybean	vacuole	45.26	54.17
VIT_18s0001g02220.t01	Wine grape	vacuole	52.46	53.75
CDY31349	Canola	vacuole	47.54	53.44
VIT_18s0001g02230.t01	Wine grape	golgi, vacuole	52.58	53.35
PGSC0003DMT400023852	Potato	extracellular	39.62	52.46
AT1G77410.3	Thale cress	golgi, vacuole	51.14	51.95
CDY43756	Canola	cytosol, nucleus, peroxisome	31.57	51.57
Solyc11g018490.1.1	Tomato	cytosol	46.46	51.26
PGSC0003DMT400023851	Potato	nucleus, peroxisome, vacuole	44.18	50.83
TraesCS6B01G214100.1	Wheat	golgi, vacuole	37.82	43.45
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	36.73	42.62
TraesCS3B01G235100.1	Wheat	golgi, vacuole	42.5	42.29
TraesCS4B01G280900.1	Wheat	golgi, vacuole	42.14	41.54
TraesCS7B01G169700.1	Wheat	vacuole	43.1	41.22
TraesCS4B01G220500.1	Wheat	golgi	42.02	41.03
TraesCS3B01G418400.2	Wheat	vacuole	40.82	40.28
TraesCS5B01G331300.1	Wheat	golgi, vacuole	39.38	39.09
TraesCS3B01G418300.2	Wheat	vacuole	40.1	38.93
TraesCS5B01G142600.1	Wheat	unclear	40.94	37.43
TraesCS1B01G030400.1	Wheat	vacuole	35.53	35.62

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	InterPro:BetaGal_jelly_roll_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0030246	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF
InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PFAM:PF13364
PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421	PANTHER:PTHR23421:SF118	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G418200	EnsemblPlants:TraesCS3B01G418200.1	SEG:seg

Description

No Description!

Coordinates

chr3B:+:655083117..655089003

Molecular Weight (calculated)

93503.2 Da

IEP (calculated)

8.882

GRAVY (calculated)

-0.338

Length

833 amino acids

Sequence
(BLAST)

001: MSMAAAAAAI VAVLVAALMA RALSAASAAG RVWVDEEKGA HNGTARRQVT YDGRSLMLDG ARRMLFSGDI HYPRSTPEMW PRLIESAREG GLDVIQTYVF
101: WNVHEPIQGQ YNFEGRYDLV KFIREIHAQG LYVSLRVGPF VEAEWKYGGL PFWLRGVPNI TFRCNNEPYK VHMQKFVAKI VNMMKDEKLY YPQGGPIIIS
201: QIENEYKLVE AAFRSRGPPY VRWAAAMAVN LQTGIPWMMC KQDDAPDPII NTCNGLICGE TFHGPNSHNK PALWTENWTS RYPLYGHDPR FRSPADIAFA
301: VALFIARKKG SFVSYYMYHG GTNFGRFASS YVTTSYYDGA PLDEYGLIWQ STWSHLRELH AAIKQSEEPL LSGAYSNYSF GEQQEGHVFK TESNCVAFLV
401: NLDKHKASNI QFGEASFQLA PKSISILSSC RRVVFETAKI NAQHGLRTAQ AVQSLNNVDS WKVFKEPIPL AINNSTHIGN RFFEHLSTTK DETDYLWYLT
501: RYDYRSSGNS QLVLNVESQA HVLHAYINND YAGTVHGSHD GPRNIVLKTP ITLREGQNSI SLLSVMVGSP DSGAYMERRI FGVRKVSIQQ GHHKSRSLNN
601: ELWKHQIGLS GEMNHIYTRE GSSRAQWTAI NKSMHLPLIW YKTTFDTPWG NDPVTLNLSS MGKGEVWVNG ESIGRYWASF KTPSGQPSQS LYHIPQYFMK
701: PRENTLVLME EIGGDPLQIT VNTVSVTRVY SSVNELSTPS LLSRRKHPAV RLRCQQGKRI TDIEFASYGN PVEDCRSSSR SCLGSCHAET TEFVVKDACL
801: GRRKCAIPVR PAKFGGDPCP GIEKTLSVVA SCG

Best Arabidopsis Sequence Match ( AT5G63800.1 )
(BLAST)

001: MEMGRLVFGL CLILIVGTFL EFSGGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN
101: DLVKFIKEIR SQGLYVCLRI GPFIEAEWNY GGLPFWLRDV PGMVYRTDNE PFKFHMQKFT AKIVDLMKSE GLYASQGGPI ILSQIENEYA NVEGAFHEKG
201: ASYIKWAGQM AVGLKTGVPW IMCKSPDAPD PVINTCNGMK CGETFPGPNS PNKPKMWTED WTSFFQVYGK EPYIRSAEDI AFHAALFVAK NGSYINYYMY
301: HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKSSAN PLLQGKQTIL SLGPMQQAYV FEDANNGCVA FLVNNDAKAS QIQFRNNAYS
401: LSPKSIGILQ NCKNLIYETA KVNVKMNTRV TTPVQVFNVP DNWNLFRETI PAFPGTSLKT NALLEHTNLT KDKTDYLWYT SSFKLDSPCT NPSIYTESSG
501: HVVHVFVNNA LAGSGHGSRD IRVVKLQAPV SLINGQNNIS ILSGMVGLPD SGAYMERRSY GLTKVQISCG GTKPIDLSRS QWGYSVGLLG EKVRLYQWKN
601: LNRVKWSMNK AGLIKNRPLA WYKTTFDGPN GDGPVGLHMS SMGKGEIWVN GESIGRYWVS FLTPAGQPSQ SIYHIPRAFL KPSGNLLVVF EEEGGDPLGI
701: SLNTISVVGS SQAQSQFS

Arabidopsis Description

BGAL6Beta-galactosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN4]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.