Factsheet for TraesCS5B01G142600.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G143600.4	Wheat	plasma membrane	98.02	98.02
TraesCS5D01G148400.1	Wheat	unclear	97.26	97.15
HORVU5Hr1G045820.9	Barley	extracellular, plasma membrane, vacuole	91.77	91.77
Os12t0429200-01	Rice	plasma membrane	84.19	83.46
EES16726	Sorghum	extracellular	80.46	79.41
Zm00001d041880_P001	Maize	extracellular, plasma membrane	79.69	79.08
GSMUA_Achr2P21230_001	Banana	extracellular, golgi, vacuole	63.78	66.17
AT2G32810.1	Thale cress	golgi, vacuole	60.81	62.46
CDY23785	Canola	vacuole	60.59	61.81
CDY19166	Canola	golgi, vacuole	60.04	61.6
Bra021814.1-P	Field mustard	plastid	59.93	61.14
PGSC0003DMT400067956	Potato	extracellular	59.71	60.99
Solyc09g092160.2.1	Tomato	extracellular	59.5	60.76
KRH42784	Soybean	nucleus	58.84	58.97
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	40.94	51.95
TraesCS4B01G220500.1	Wheat	golgi	48.63	51.93
TraesCS6B01G214100.1	Wheat	golgi, vacuole	40.94	51.45
TraesCS4B01G280900.1	Wheat	golgi, vacuole	46.32	49.94
TraesCS3B01G235100.1	Wheat	golgi, vacuole	44.79	48.75
TraesCS3B01G418400.2	Wheat	vacuole	43.25	46.68
TraesCS3B01G418300.2	Wheat	vacuole	42.37	44.99
TraesCS1B01G278400.1	Wheat	plastid	38.97	43.08
TraesCS1B01G030400.1	Wheat	vacuole	37.65	41.28
TraesCS3B01G418200.1	Wheat	vacuole	37.43	40.94
TraesCS7B01G169700.1	Wheat	vacuole	36.99	38.69
TraesCS5B01G331300.1	Wheat	golgi, vacuole	33.15	36.0

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
Gene3D:2.60.120.740	MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030312	InterPro:Galactose-bd-like_sf	InterPro:Gly_Hdrlase_35_cat
InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979	InterPro:Lectin_gal-bd_dom
PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PFscan:PS50228	PANTHER:PTHR23421
PANTHER:PTHR23421:SF74	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5B01G142600	EnsemblPlants:TraesCS5B01G142600.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:268499914..268528013

Molecular Weight (calculated)

100827.0 Da

IEP (calculated)

5.626

GRAVY (calculated)

-0.244

Length

911 amino acids

Sequence
(BLAST)

001: MAASPPPSRF GPPLLPLLLL LVVGYFTVSA SAAGELSQVV GRGTESDGPY FEPFNVSYDH RAVRIGGQRR MLVSAGVHYP RATPEMWPSI IAKCKEGGAD
101: VIETVFWNGH EPAKGQYYFE DRFDLVRFVK LLAAEGLFFL LRIGPYACAE WNFGGFPVWL RDIPGIEFRT DNEPYKAEMQ TFVTKIVDIM KAEKLYSWQG
201: GPIILQQVEN EYGNIQSKYG QAGKRYMQWA AQMALGLDTG IPWVMCRQTD APEQILDTCN AFYCDGFQPN SYNKPKIWTE DWDGWYANWG GPLPHRPAKD
301: SAFAVARFYQ RGGSLQNYYM YFGGTNFART AGGPLQITSY DYDAPVNEYG FLRQPKWGHL KDLHTAIKLC EPALIAVDGS PQYVKLGSMQ EAHVYSNGKV
401: QTNRSMTGNG LICSAFLANI DEHKYASVWI FGKSYNLPPW SVSILPDCEN VALNTAHVGA QTSVFTFESG SPSHSSRHKP SLLLPGVDGS YFSSTWWTSK
501: EIIGTWGGES FAAQGILEHL NVTKDTSDYL WYTTSVNISD EDVGFWSSKG VLPALKIDQI RDVARVFVNG ELAGSQVGHW VSLKQPVQFV QGLNKLTLLS
601: EIVGLQNYGA FLEKDGAGFR GQVKLTGLPN GDIDLTHSVW TYQVGLKGEF SMIYAPEKQA CAEWSGMQID DILSPFTWYK TMFDAPKGTD PVAIYLGSMG
701: KGQAWVNGHL IGRYWSLVAP ESGCSSSCNY PGAYSESKCQ SNCGMPTQSW YHIPREWLQE SDNLLVLFEE TGGDPSKISL EVHYTKTICS RISESYYPPL
801: SAWSRLTSGR VLVDTIAPEL RLRCDDGHLI TKITFASYGT PSGGCQNFSE GKCHASSTLA LVSEACVGNN ECAISVSNDA FGDPCRRVVK DLAVEAECSP
901: SSTTKEPRDE M

Best Arabidopsis Sequence Match ( AT2G32810.1 )
(BLAST)

001: MAESIRTFSL QWRILSLIIA LLVYFPILSG SYFKPFNVSY DHRALIIAGK RRMLVSAGIH YPRATPEMWS DLIAKSKEGG ADVVQTYVFW NGHEPVKGQY
101: NFEGRYDLVK FVKLIGSSGL YLHLRIGPYV CAEWNFGGFP VWLRDIPGIE FRTDNEPFKK EMQKFVTKIV DLMREAKLFC WQGGPIIMLQ IENEYGDVEK
201: SYGQKGKDYV KWAASMALGL GAGVPWVMCK QTDAPENIID ACNGYYCDGF KPNSRTKPVL WTEDWDGWYT KWGGSLPHRP AEDLAFAVAR FYQRGGSFQN
301: YYMYFGGTNF GRTSGGPFYI TSYDYDAPLD EYGLRSEPKW GHLKDLHAAI KLCEPALVAA DAPQYRKLGS KQEAHIYHGD GETGGKVCAA FLANIDEHKS
401: AHVKFNGQSY TLPPWSVSIL PDCRHVAFNT AKVGAQTSVK TVESARPSLG SMSILQKVVR QDNVSYISKS WMALKEPIGI WGENNFTFQG LLEHLNVTKD
501: RSDYLWHKTR ISVSEDDISF WKKNGPNSTV SIDSMRDVLR VFVNKQLAGS IVGHWVKAVQ PVRFIQGNND LLLLTQTVGL QNYGAFLEKD GAGFRGKAKL
601: TGFKNGDLDL SKSSWTYQVG LKGEADKIYT VEHNEKAEWS TLETDASPSI FMWYKTYFDP PAGTDPVVLN LESMGRGQAW VNGQHIGRYW NIISQKDGCD
701: RTCDYRGAYN SDKCTTNCGK PTQTRYHVPR SWLKPSSNLL VLFEETGGNP FKISVKTVTA GILCGQVSES HYPPLRKWST PDYINGTMSI NSVAPEVHLH
801: CEDGHVISSI EFASYGTPRG SCDGFSIGKC HASNSLSIVS EACKGRNSCF IEVSNTAFIS DPCSGTLKTL AVMSRCSPSQ NMSDLSF

Arabidopsis Description

BGAL9Beta-galactosidase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV3]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.