Factsheet for TraesCS1B01G030400.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G024200.1	Wheat	vacuole	97.11	97.35
TraesCS1A01G024100.1	Wheat	vacuole	96.87	97.22
HORVU1Hr1G003200.1	Barley	golgi, vacuole	93.5	93.61
HORVU1Hr1G003210.2	Barley	golgi, vacuole	92.18	92.62
HORVU2Hr1G057440.2	Barley	vacuole	57.4	91.03
Os06t0628500-00	Rice	extracellular, golgi, vacuole	28.88	81.63
EES03081	Sorghum	extracellular	77.62	77.71
Os10t0330600-01	Rice	extracellular	77.02	77.29
Zm00001d043393_P001	Maize	extracellular	76.17	77.01
Os10t0340600-01	Rice	extracellular, golgi, vacuole	73.89	74.15
CDX98327	Canola	golgi, vacuole	18.53	61.35
GSMUA_Achr5P11870_001	Banana	extracellular, golgi	54.75	57.96
CDY70160	Canola	vacuole	36.46	55.6
GSMUA_Achr4P25980_001	Banana	extracellular, golgi, vacuole	40.43	54.28
CDX67790	Canola	vacuole	52.35	53.37
CDY65885	Canola	vacuole	52.59	53.23
GSMUA_Achr4P26030_001	Banana	cytosol, peroxisome, vacuole	33.94	53.21
CDX93659	Canola	vacuole	52.11	52.93
CDY28339	Canola	vacuole	49.94	52.66
AT1G31740.1	Thale cress	vacuole	49.22	52.5
CDY34975	Canola	golgi, plasma membrane, vacuole	49.58	52.28
VIT_11s0016g00680.t01	Wine grape	vacuole	51.74	51.5
CDY69031	Canola	cytosol, plastid, vacuole	38.27	51.21
PGSC0003DMT400059880	Potato	cytosol	47.41	51.17
Solyc07g042220.1.1	Tomato	unclear	49.94	50.73
Bra018721.1-P	Field mustard	extracellular, golgi, vacuole	44.52	50.55
KRH19351	Soybean	extracellular, golgi, vacuole	50.3	50.54
KRH07365	Soybean	extracellular, golgi, vacuole	50.18	50.48
GSMUA_Achr5P11850_001	Banana	extracellular, golgi	54.39	50.33
VIT_08s0007g04270.t01	Wine grape	extracellular, golgi, vacuole	50.3	50.18
AT5G20710.1	Thale cress	vacuole	49.58	49.88
KRH02579	Soybean	extracellular, golgi, vacuole	50.54	49.76
KRH48708	Soybean	vacuole	50.3	49.41
KRH48710	Soybean	vacuole	50.18	49.29
KRH38264	Soybean	endoplasmic reticulum, golgi, vacuole	49.1	49.04
Bra002325.1-P	Field mustard	golgi, vacuole	48.74	48.85
KRH70131	Soybean	vacuole	48.86	48.62
Bra003128.1-P	Field mustard	extracellular, vacuole	41.28	48.51
KRH06832	Soybean	mitochondrion	42.48	47.07
CDY32304	Canola	cytosol	49.94	47.05
TraesCS7B01G264200.1	Wheat	plasma membrane, vacuole	40.55	46.94
TraesCS6B01G214100.1	Wheat	golgi, vacuole	40.07	45.93
TraesCS4B01G220500.1	Wheat	golgi	46.45	45.25
KRH38266	Soybean	cytosol, peroxisome	31.53	44.79
TraesCS3B01G235100.1	Wheat	golgi, vacuole	44.28	43.97
TraesCS3B01G418400.2	Wheat	vacuole	43.08	42.42
TraesCS4B01G280900.1	Wheat	golgi, vacuole	42.96	42.25
TraesCS3B01G418300.2	Wheat	vacuole	41.76	40.44
CDY53917	Canola	plastid	49.82	40.23
TraesCS5B01G331300.1	Wheat	golgi, vacuole	39.11	38.74
TraesCS5B01G142600.1	Wheat	unclear	41.28	37.65
CDX67763	Canola	golgi, plasma membrane, vacuole	34.9	37.61
TraesCS7B01G169700.1	Wheat	vacuole	39.35	37.54
TraesCS1B01G278400.1	Wheat	plastid	36.22	36.53
TraesCS3B01G418200.1	Wheat	vacuole	35.62	35.53

Protein Annotations

KEGG:00052+3.2.1.23	KEGG:00511+3.2.1.23	KEGG:00531+3.2.1.23	KEGG:00600+3.2.1.23	KEGG:00604+3.2.1.23	Gene3D:2.60.120.260
MapMan:21.3.2.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0030246	InterPro:Galactose-bd-like_sf
InterPro:Gly_Hdrlase_35_cat	InterPro:Glyco_hydro_35_CS	InterPro:Glycoside_Hdrlase_35	InterPro:Glycoside_hydrolase_SF	InterPro:IPR000922	InterPro:IPR008979
InterPro:Lectin_gal-bd_dom	PFAM:PF01301	PFAM:PF02140	PRINTS:PR00742	ScanProsite:PS01182	PANTHER:PTHR23421
PANTHER:PTHR23421:SF68	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1B01G030400	EnsemblPlants:TraesCS1B01G030400.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:15038619..15042449

Molecular Weight (calculated)

92044.7 Da

IEP (calculated)

6.473

GRAVY (calculated)

-0.356

Length

831 amino acids

Sequence
(BLAST)

001: MERVSLLPLV LLLAAAAGGR GVSGTEVAYN DRALVIDGER RIVISGSIHY PRSTPEMWPD LIRKAKEGGL DAIQTYVFWN GHEPRRREYN FEGSYDIVRF
101: FKEIQDAGMY AILRIGPYIC GEWNYGGLPA WLREISGMQF RMHNHPFERE METFTTLIVD KLKEAKMFAG QGGPIILSQI ENEYGNIMGK LNNNESASEY
201: IHWCAAMANK QNVGVPWIMC QQDDDVPPNV INTCNGFYCH DWFPKRTDIP KIWTENWTGW FKAWDKPDFH RSAEDIAFSV AMFFQKRGSL QNYYMYHGGT
301: NFGRTSGGPY ITTSYDYDAP LDEYGNIRQP KYGHLKDLHN VLKSMEKILL HGDYKDTNIS SSNVTVTKYT LDNSSACFIS NKFDDKEVNV TLDGGATHVV
401: PAWSVSILPD CKTVAYNSAK IKTQTSVMVK RPEVETVREG LAWSWMPENL QPFMTDEKGN FRKNELLEQI ATSGDQSDYL WYRTSFEHKG EATYKLHVNT
501: TGHELYAFVN GKLVGKQHSP NGGFVFQMET PVKLHSGKNY ISLLSGTIGL KNYGALFEMM PAGIAGGPVK LVDTVTNTTA YDLSNSSWSY KAGLAGEYRE
601: THLDKADDRS QWSGGLNGTI PVHRPFTWYK ATFEAPAGKE PVVADLLGLG KGVVWVNGNN LGRYWPSYVA ADMGGCKQCD YRGTFKAEGD GLKCLTGCNE
701: PSQRFYHVPR SFLRAGEPNT MVLFEEAGGD PTRVNFHTVA VGAACAEAAE VGDEVALACS HGRTISSVDV ASLGVARGKC GAYEGGCESK AALAAFTAAC
801: VGKESCAVRH TEDFRAGSGC DSGVLTVQAT C

Best Arabidopsis Sequence Match ( AT5G20710.1 )
(BLAST)

001: MKMKHFTRLL SLFFILITSL SLAKSTIVSH DERAITINGK RRILLSGSIH YPRSTADMWP DLINKAKDGG LDAIETYVFW NAHEPKRREY DFSGNLDVVR
101: FIKTIQDAGL YSVLRIGPYV CAEWNYGGFP VWLHNMPNMK FRTVNPSFMN EMQNFTTKIV KMMKEEKLFA SQGGPIILAQ IENEYGNVIS SYGAEGKAYI
201: DWCANMANSL DIGVPWLMCQ QPNAPQPMLE TCNGFYCDQY EPTNPSTPKM WTENWTGWFK NWGGKHPYRT AEDLAFSVAR FFQTGGTFQN YYMYHGGTNF
301: GRVAGGPYIT TSYDYHAPLD EFGNLNQPKW GHLKQLHTVL KSMEKSLTYG NISRIDLGNS IKATIYTTKE GSSCFIGNVN ATADALVNFK GKDYHVPAWS
401: VSVLPDCDKE AYNTAKVNTQ TSIMTEDSSK PERLEWTWRP ESAQKMILKG SGDLIAKGLV DQKDVTNDAS DYLWYMTRLH LDKKDPLWSR NMTLRVHSNA
501: HVLHAYVNGK YVGNQFVKDG KFDYRFERKV NHLVHGTNHI SLLSVSVGLQ NYGPFFESGP TGINGPVSLV GYKGEETIEK DLSQHQWDYK IGLNGYNDKL
601: FSIKSVGHQK WANEKLPTGR MLTWYKAKFK APLGKEPVIV DLNGLGKGEA WINGQSIGRY WPSFNSSDDG CKDECDYRGA YGSDKCAFMC GKPTQRWYHV
701: PRSFLNASGH NTITLFEEMG GNPSMVNFKT VVVGTVCARA HEHNKVELSC HNRPISAVKF ASFGNPLGHC GSFAVGTCQG DKDAAKTVAK ECVGKLNCTV
801: NVSSDTFGST LDCGDSPKKL AVELEC

Arabidopsis Description

BGAL7Beta-galactosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCV5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.